RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 FMC1Q96HJ9 113 aa9.83□□□□□ -0.84
MSH5-208ENST00000429846 TCEAL7Q9BRU2 100 aa9.83□□□□□ -0.84
MSH5-208ENST00000429846 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.82□□□□□ -0.84
MSH5-208ENST00000429846 J3QL48 77 aa9.82□□□□□ -0.84
MSH5-208ENST00000429846 LECT2O14960 151 aa9.82□□□□□ -0.84
MSH5-208ENST00000429846 TPT1P13693 172 aaKnown RBP9.82□□□□□ -0.84
MSH5-208ENST00000429846 UBE2G1P62253 170 aa9.82□□□□□ -0.84
MSH5-208ENST00000429846 Q5BKY6 102 aa9.82□□□□□ -0.84
MSH5-208ENST00000429846 AKR1C8PQ5T2L2 129 aa9.82□□□□□ -0.84
MSH5-208ENST00000429846 FAM162BQ5T6X4 162 aa9.82□□□□□ -0.84
MSH5-208ENST00000429846 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
MSH5-208ENST00000429846 Q8N976 141 aa9.82□□□□□ -0.84
MSH5-208ENST00000429846 SFRP2Q96HF1 295 aa9.82□□□□□ -0.84
MSH5-208ENST00000429846 Q9UF83 564 aa9.82□□□□□ -0.84
MSH5-208ENST00000429846 PHLDA3Q9Y5J5 127 aa9.82□□□□□ -0.84
MSH5-208ENST00000429846 FXYD6-FXYD2A0A087WZ82 144 aa9.81□□□□□ -0.84
MSH5-208ENST00000429846 TRBV10-1A0A0K0K1A3 114 aa9.81□□□□□ -0.84
MSH5-208ENST00000429846 M0R036 132 aa9.81□□□□□ -0.84
MSH5-208ENST00000429846 SH2D1AO60880 128 aa9.81□□□□□ -0.84
MSH5-208ENST00000429846 ELOBQ15370 118 aa9.81□□□□□ -0.84
MSH5-208ENST00000429846 LINC01559Q495D7 138 aa9.81□□□□□ -0.84
MSH5-208ENST00000429846 IGKV2D-24A0A075B6R9 120 aa9.8□□□□□ -0.84
MSH5-208ENST00000429846 A0A087WX48 190 aa9.8□□□□□ -0.84
MSH5-208ENST00000429846 TRBV6-1A0A0K0K1D8 114 aa9.8□□□□□ -0.84
MSH5-208ENST00000429846 CRIP1P50238 77 aa9.8□□□□□ -0.84
MSH5-208ENST00000429846 RPL36AP83881 106 aaKnown RBP9.8□□□□□ -0.84
MSH5-208ENST00000429846 ZNF674Q2M3X9 581 aa9.8□□□□□ -0.84
MSH5-208ENST00000429846 KCNIP4Q6PIL6 250 aa9.8□□□□□ -0.84
MSH5-208ENST00000429846 ZFP82Q8N141 532 aa9.8□□□□□ -0.84
MSH5-208ENST00000429846 BAALCQ8WXS3 180 aa9.8□□□□□ -0.84
MSH5-208ENST00000429846 RPL36ALQ969Q0 106 aaKnown RBP9.8□□□□□ -0.84
MSH5-208ENST00000429846 BATF3Q9NR55 127 aa9.8□□□□□ -0.84
MSH5-208ENST00000429846 KLK12Q9UKR0 248 aa9.8□□□□□ -0.84
MSH5-208ENST00000429846 A0A087WWL8 130 aa9.79□□□□□ -0.84
MSH5-208ENST00000429846 GRIFINA4D1Z8 144 aa9.79□□□□□ -0.84
MSH5-208ENST00000429846 MAP1LC3B2A6NCE7 125 aa9.79□□□□□ -0.84
MSH5-208ENST00000429846 RBFOX3A6NFN3 312 aa9.79□□□□□ -0.84
MSH5-208ENST00000429846 M0R381 172 aa9.79□□□□□ -0.84
MSH5-208ENST00000429846 FHITP49789 147 aa9.79□□□□□ -0.84
MSH5-208ENST00000429846 ATRAIDQ6UW56 229 aa9.79□□□□□ -0.84
MSH5-208ENST00000429846 DEFB104AQ8WTQ1 72 aa9.79□□□□□ -0.84
MSH5-208ENST00000429846 MAP1LC3BQ9GZQ8 125 aa9.79□□□□□ -0.84
MSH5-208ENST00000429846 TRBV7-3A0A075B6L6 115 aa9.78□□□□□ -0.84
MSH5-208ENST00000429846 KRTAP29-1A8MX34 341 aaPredicted RBP9.78□□□□□ -0.84
MSH5-208ENST00000429846 LTAP01374 205 aa9.78□□□□□ -0.84
MSH5-208ENST00000429846 Q0VG73 95 aa9.78□□□□□ -0.84
MSH5-208ENST00000429846 SCXQ7RTU7 201 aa9.78□□□□□ -0.84
MSH5-208ENST00000429846 AKR1C3P42330 323 aa9.77□□□□□ -0.85
MSH5-208ENST00000429846 UBE2D3P61077 147 aa9.77□□□□□ -0.85
MSH5-208ENST00000429846 UBE2D2P62837 147 aa9.77□□□□□ -0.85
MSH5-208ENST00000429846 OR10G8Q8NGN5 311 aa9.77□□□□□ -0.85
MSH5-208ENST00000429846 STOML3Q8TAV4 291 aa9.77□□□□□ -0.85
MSH5-208ENST00000429846 UBE2WQ96B02 151 aa9.77□□□□□ -0.85
MSH5-208ENST00000429846 C14orf177Q52M58 125 aa9.76□□□□□ -0.85
MSH5-208ENST00000429846 TMSB15BA0A087X1C1 80 aa9.75□□□□□ -0.85
MSH5-208ENST00000429846 CXCL1P09341 107 aa9.75□□□□□ -0.85
MSH5-208ENST00000429846 RAB4BP61018 213 aa9.75□□□□□ -0.85
MSH5-208ENST00000429846 LINC01620Q4KN68 170 aa9.75□□□□□ -0.85
MSH5-208ENST00000429846 CST9LP1Q5W188 147 aa9.75□□□□□ -0.85
MSH5-208ENST00000429846 DNAJC30Q96LL9 226 aa9.75□□□□□ -0.85
MSH5-208ENST00000429846 CHAC1Q9BUX1 264 aa9.75□□□□□ -0.85
MSH5-208ENST00000429846 DNAH8Q96JB1 4490 aa9.75□□□□□ -0.85
MSH5-208ENST00000429846 TRBV6-8A0A0A6YYG3 113 aa9.74□□□□□ -0.85
MSH5-208ENST00000429846 CRPP02741 224 aa9.74□□□□□ -0.85
MSH5-208ENST00000429846 S100A9P06702 114 aaKnown RBP9.74□□□□□ -0.85
MSH5-208ENST00000429846 PKIAP61925 76 aa9.74□□□□□ -0.85
MSH5-208ENST00000429846 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.74□□□□□ -0.85
MSH5-208ENST00000429846 C1orf43Q9BWL3 253 aa9.74□□□□□ -0.85
MSH5-208ENST00000429846 ARPC5O15511 151 aa9.73□□□□□ -0.85
MSH5-208ENST00000429846 ZNF56Q15929 161 aa9.73□□□□□ -0.85
MSH5-208ENST00000429846 CYTL1Q9NRR1 136 aa9.73□□□□□ -0.85
MSH5-208ENST00000429846 G3V3Q6 166 aa9.72□□□□□ -0.85
MSH5-208ENST00000429846 PRR27Q6MZM9 219 aa9.72□□□□□ -0.85
MSH5-208ENST00000429846 ZNF471Q9BX82 626 aaPredicted RBP9.72□□□□□ -0.85
MSH5-208ENST00000429846 TMEM262E9PQX1 116 aa9.71□□□□□ -0.86
MSH5-208ENST00000429846 SNAI2O43623 268 aa9.71□□□□□ -0.86
MSH5-208ENST00000429846 PAGE4O60829 102 aa9.71□□□□□ -0.86
MSH5-208ENST00000429846 IGLV2-8P01709 118 aa9.71□□□□□ -0.86
MSH5-208ENST00000429846 MPV17L2Q567V2 206 aa9.71□□□□□ -0.86
MSH5-208ENST00000429846 TMEM97Q5BJF2 176 aa9.71□□□□□ -0.86
MSH5-208ENST00000429846 NEXN-AS1Q8NBZ9 246 aa9.71□□□□□ -0.86
MSH5-208ENST00000429846 OR10AG1Q8NH19 301 aa9.71□□□□□ -0.86
MSH5-208ENST00000429846 CIRBP-AS1Q8TBR5 109 aa9.71□□□□□ -0.86
MSH5-208ENST00000429846 PFDN1O60925 122 aa9.7□□□□□ -0.86
MSH5-208ENST00000429846 OR5AL1P0C617 328 aa9.7□□□□□ -0.86
MSH5-208ENST00000429846 ZNF345Q14585 488 aa9.7□□□□□ -0.86
MSH5-208ENST00000429846 ENHOQ6UWT2 76 aa9.7□□□□□ -0.86
MSH5-208ENST00000429846 C15orf54Q8N8G6 183 aa9.7□□□□□ -0.86
MSH5-208ENST00000429846 MLST8Q9BVC4 326 aa9.7□□□□□ -0.86
MSH5-208ENST00000429846 SSBP4Q9BWG4 385 aaPredicted RBP9.7□□□□□ -0.86
MSH5-208ENST00000429846 UMAD1C9J7I0 102 aa9.69□□□□□ -0.86
MSH5-208ENST00000429846 ANGP03950 147 aaKnown RBP9.69□□□□□ -0.86
MSH5-208ENST00000429846 KRTAP10-4P60372 401 aaPredicted RBP9.69□□□□□ -0.86
MSH5-208ENST00000429846 RPL19P84098 196 aaKnown RBP9.69□□□□□ -0.86
MSH5-208ENST00000429846 MIAQ16674 131 aa9.69□□□□□ -0.86
MSH5-208ENST00000429846 SPANXN1Q5VSR9 72 aa9.69□□□□□ -0.86
MSH5-208ENST00000429846 MBD3L1Q8WWY6 194 aa9.69□□□□□ -0.86
MSH5-208ENST00000429846 CHCHD5Q9BSY4 110 aa9.69□□□□□ -0.86
MSH5-208ENST00000429846 VAX2Q9UIW0 290 aa9.69□□□□□ -0.86
MSH5-208ENST00000429846 SCO2A0A1W2PP80 73 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms