RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 LOC389332A0A1B0GUA5 103 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 FAM181BA6NEQ2 426 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 H3BT86 120 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 IGKV1-5P01602 117 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 HLA-DRB4P13762 266 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 LINC00205P59089 165 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 SRSF3P84103 164 aaKnown RBP6.68□□□□□ -1.34
ABCA8-202ENST00000428549 MPV17L2Q567V2 206 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 LINC01545Q5VT33 79 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 TEN1Q86WV5 123 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 RITA1Q96K30 269 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 SLC35B3Q9H1N7 401 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 SELENOKQ9Y6D0 94 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 HLA-DRB4X5D2U9 266 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.68□□□□□ -1.34
ABCA8-202ENST00000428549 TRAV14DV4A0A0A6YYC5 116 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 IGHV1-3A0A0C4DH29 117 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 A0A0G2JRQ6 117 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 MUC21A0A140T8X8 626 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 A8MUN3 132 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 LST1O00453 97 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 TRBV12-3P01733 135 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 COX7CP15954 63 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 HLA-DMBP28068 263 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 KRTAP1-1Q07627 177 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 MUC21Q5SSG8 566 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 BPIFA4PQ86YQ2 179 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 ZANQ9Y493 2812 aa6.68□□□□□ -1.34
ABCA8-202ENST00000428549 FAM24AA6NFZ4 105 aa6.67□□□□□ -1.34
ABCA8-202ENST00000428549 E9PLD3 99 aa6.67□□□□□ -1.34
ABCA8-202ENST00000428549 PSPHP1O15172 72 aa6.67□□□□□ -1.34
ABCA8-202ENST00000428549 ZNF73O43830 326 aaPredicted RBP6.67□□□□□ -1.34
ABCA8-202ENST00000428549 LGALS3P17931 250 aaKnown RBP6.67□□□□□ -1.34
ABCA8-202ENST00000428549 PRB3Q04118 309 aaPredicted RBP6.67□□□□□ -1.34
ABCA8-202ENST00000428549 LINC00242Q5T6M2 205 aa6.67□□□□□ -1.34
ABCA8-202ENST00000428549 RNF5Q99942 180 aa6.67□□□□□ -1.34
ABCA8-202ENST00000428549 ARHGAP32A7KAX9 2087 aa6.66□□□□□ -1.34
ABCA8-202ENST00000428549 WNK2Q9Y3S1 2297 aa6.66□□□□□ -1.34
ABCA8-202ENST00000428549 FXYD6-FXYD2A0A087WZ82 144 aa6.66□□□□□ -1.34
ABCA8-202ENST00000428549 RBAKDNA6NC62 111 aa6.66□□□□□ -1.34
ABCA8-202ENST00000428549 C9JQL5 133 aa6.66□□□□□ -1.34
ABCA8-202ENST00000428549 M0R378 163 aa6.66□□□□□ -1.34
ABCA8-202ENST00000428549 SYNGR2O43760 224 aa6.66□□□□□ -1.34
ABCA8-202ENST00000428549 IGKV1-16P04430 117 aa6.66□□□□□ -1.34
ABCA8-202ENST00000428549 TOMM6Q96B49 74 aa6.66□□□□□ -1.34
ABCA8-202ENST00000428549 PMCHL2Q9BQD1 86 aa6.66□□□□□ -1.34
ABCA8-202ENST00000428549 SLC39A9Q9NUM3 307 aa6.66□□□□□ -1.34
ABCA8-202ENST00000428549 SONP18583 2426 aaKnown RBP6.66□□□□□ -1.34
ABCA8-202ENST00000428549 TRBV20OR9-2A0A075B6H5 130 aa6.65□□□□□ -1.34
ABCA8-202ENST00000428549 IGHV1-69DA0A0B4J2H0 117 aa6.65□□□□□ -1.34
ABCA8-202ENST00000428549 IGHV1-69P01742 117 aa6.65□□□□□ -1.34
ABCA8-202ENST00000428549 CBLN1P23435 193 aa6.65□□□□□ -1.34
ABCA8-202ENST00000428549 C6orf99Q4VX62 202 aa6.65□□□□□ -1.34
ABCA8-202ENST00000428549 Q6ZRM9 215 aa6.65□□□□□ -1.34
ABCA8-202ENST00000428549 C3orf56Q8N813 242 aa6.65□□□□□ -1.34
ABCA8-202ENST00000428549 C18orf32Q8TCD1 76 aa6.65□□□□□ -1.34
ABCA8-202ENST00000428549 PPDPFLQ8WWR9 84 aa6.65□□□□□ -1.34
ABCA8-202ENST00000428549 CHCHD10Q8WYQ3 142 aaPredicted RBP6.65□□□□□ -1.34
ABCA8-202ENST00000428549 RNF126Q9BV68 326 aa6.65□□□□□ -1.34
ABCA8-202ENST00000428549 C7orf69Q9H7B7 122 aa6.65□□□□□ -1.34
ABCA8-202ENST00000428549 XCL2Q9UBD3 114 aa6.65□□□□□ -1.34
ABCA8-202ENST00000428549 KLK5Q9Y337 293 aaPredicted RBP6.65□□□□□ -1.34
ABCA8-202ENST00000428549 TRAV40A0A0B4J280 105 aa6.65□□□□□ -1.35
ABCA8-202ENST00000428549 A0A0J9YXV3 536 aa6.65□□□□□ -1.35
ABCA8-202ENST00000428549 SAA1P0DJI8 122 aaPredicted RBP6.65□□□□□ -1.35
ABCA8-202ENST00000428549 LCA10Q71F78 164 aa6.65□□□□□ -1.35
ABCA8-202ENST00000428549 C11orf1Q9H5F2 150 aa6.65□□□□□ -1.35
ABCA8-202ENST00000428549 HILPDAQ9Y5L2 63 aa6.65□□□□□ -1.35
ABCA8-202ENST00000428549 IGHV3-72A0A0B4J1Y9 119 aa6.64□□□□□ -1.35
ABCA8-202ENST00000428549 H3BUT2 72 aa6.64□□□□□ -1.35
ABCA8-202ENST00000428549 IGLV2-23P01705 113 aa6.64□□□□□ -1.35
ABCA8-202ENST00000428549 ZNF688P0C7X2 276 aa6.64□□□□□ -1.35
ABCA8-202ENST00000428549 MFAP2P55001 183 aa6.64□□□□□ -1.35
ABCA8-202ENST00000428549 ETDBQ3ZM63 59 aa6.64□□□□□ -1.35
ABCA8-202ENST00000428549 C6orf223Q8N319 242 aa6.64□□□□□ -1.35
ABCA8-202ENST00000428549 OR5C1Q8NGR4 320 aa6.64□□□□□ -1.35
ABCA8-202ENST00000428549 TMEM167AQ8TBQ9 72 aa6.64□□□□□ -1.35
ABCA8-202ENST00000428549 TMEM14BQ9NUH8 114 aa6.64□□□□□ -1.35
ABCA8-202ENST00000428549 ABCA2Q9BZC7 2435 aa6.63□□□□□ -1.35
ABCA8-202ENST00000428549 UMAD1C9J7I0 102 aa6.63□□□□□ -1.35
ABCA8-202ENST00000428549 INAFM1C9JVW0 142 aa6.63□□□□□ -1.35
ABCA8-202ENST00000428549 SYS1-DBNDD2H3BUS1 97 aa6.63□□□□□ -1.35
ABCA8-202ENST00000428549 DYNLT3P51808 116 aa6.63□□□□□ -1.35
ABCA8-202ENST00000428549 DYNAPQ8N1N2 210 aa6.63□□□□□ -1.35
ABCA8-202ENST00000428549 C17orf77Q96MU5 243 aa6.63□□□□□ -1.35
ABCA8-202ENST00000428549 PYGO2Q9BRQ0 406 aa6.63□□□□□ -1.35
ABCA8-202ENST00000428549 FN1P02751 2386 aaKnown RBP6.63□□□□□ -1.35
ABCA8-202ENST00000428549 A8MWL6 223 aa6.62□□□□□ -1.35
ABCA8-202ENST00000428549 IGLL5B9A064 214 aa6.62□□□□□ -1.35
ABCA8-202ENST00000428549 SSSCA1O60232 199 aa6.62□□□□□ -1.35
ABCA8-202ENST00000428549 NDUFA3O95167 84 aa6.62□□□□□ -1.35
ABCA8-202ENST00000428549 LINC00313P59037 77 aa6.62□□□□□ -1.35
ABCA8-202ENST00000428549 NPC2P61916 151 aa6.62□□□□□ -1.35
ABCA8-202ENST00000428549 SNRPD3P62318 126 aaKnown RBP6.62□□□□□ -1.35
ABCA8-202ENST00000428549 ZC2HC1BQ5TFG8 222 aa6.62□□□□□ -1.35
ABCA8-202ENST00000428549 PRNTQ86SH4 94 aa6.62□□□□□ -1.35
ABCA8-202ENST00000428549 NEXN-AS1Q8NBZ9 246 aa6.62□□□□□ -1.35
ABCA8-202ENST00000428549 TNFRSF19Q9NS68 423 aa6.62□□□□□ -1.35
ABCA8-202ENST00000428549 SETD2Q9BYW2 2564 aaPredicted RBP6.62□□□□□ -1.35
ABCA8-202ENST00000428549 NSD1Q96L73 2696 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms