RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 KIF25-AS1Q9Y6Z4 181 aa7.67□□□□□ -1.18
HDAC9-210ENST00000428307 NXPH4O95158 308 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 LINC00315P59091 139 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 SUMO2P61956 95 aaKnown RBP7.66□□□□□ -1.18
HDAC9-210ENST00000428307 Q6ZN92 141 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 C9orf85Q96MD7 179 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 SNHG12Q9BXW3 62 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 UQCR10Q9UDW1 63 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 TP73-AS1Q9UF72 201 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 LINC01546A6NGU7 62 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 SAP30O75446 220 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 PROK1P58294 105 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 LAGE3Q14657 143 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 ODF3L2Q3SX64 289 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 ZNF876PQ49A33 203 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 SMIM2Q9BVW6 85 aa7.66□□□□□ -1.18
HDAC9-210ENST00000428307 PRSS47A8MTI9 375 aa7.65□□□□□ -1.18
HDAC9-210ENST00000428307 C2CD3Q4AC94 2353 aa7.65□□□□□ -1.18
HDAC9-210ENST00000428307 NSD1Q96L73 2696 aaPredicted RBP7.65□□□□□ -1.19
HDAC9-210ENST00000428307 HSBP1L1C9JCN9 74 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 M0R143 59 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 TCTAP57738 103 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 NEGR1Q7Z3B1 354 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 DEFB125Q8N687 156 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 JMJD8Q96S16 334 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 GOLT1BQ9Y3E0 138 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 ADARB2-AS1A8MUL3 147 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 NUDT3O95989 172 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 PRSS1P07477 247 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 BATFQ16520 125 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 SUMO4Q6EEV6 95 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 SYT8Q8NBV8 401 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 XCL2Q9UBD3 114 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 DKK2Q9UBU2 259 aa7.64□□□□□ -1.19
HDAC9-210ENST00000428307 TRGV11A0A075B6L2 103 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 TRAV25A0A0B4J276 109 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 A8MTW9 85 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 NDUFA7O95182 113 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 HNRNPA3P51991 378 aaKnown RBP7.63□□□□□ -1.19
HDAC9-210ENST00000428307 C20orf78Q9BR46 151 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 CSTL1Q9H114 145 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 OR11H12B2RN74 326 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 CRYGDP07320 174 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 KRTAP10-3P60369 221 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 ZNF56Q15929 161 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 STHQ8IWL8 128 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 STPG4Q8N801 248 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 LINC01587Q99440 93 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 ST20Q9HBF5 79 aa7.63□□□□□ -1.19
HDAC9-210ENST00000428307 A0A1B0GV90 55 aa7.62□□□□□ -1.19
HDAC9-210ENST00000428307 LGALS9BQ3B8N2 356 aa7.62□□□□□ -1.19
HDAC9-210ENST00000428307 LGALS9CQ6DKI2 356 aa7.62□□□□□ -1.19
HDAC9-210ENST00000428307 POM121L12Q8N7R1 296 aa7.62□□□□□ -1.19
HDAC9-210ENST00000428307 IGHV3OR16-12A0A075B7B8 117 aa7.62□□□□□ -1.19
HDAC9-210ENST00000428307 IGHV3-73A0A0B4J1V6 119 aa7.62□□□□□ -1.19
HDAC9-210ENST00000428307 PPP1R17O96001 155 aa7.61□□□□□ -1.19
HDAC9-210ENST00000428307 C2orf88Q9BSF0 95 aa7.61□□□□□ -1.19
HDAC9-210ENST00000428307 TMEM208Q9BTX3 173 aa7.61□□□□□ -1.19
HDAC9-210ENST00000428307 WFDC10AQ9H1F0 79 aa7.61□□□□□ -1.19
HDAC9-210ENST00000428307 ORMDL2Q53FV1 153 aa7.6□□□□□ -1.19
HDAC9-210ENST00000428307 LBHQ53QV2 105 aaPredicted RBP7.6□□□□□ -1.19
HDAC9-210ENST00000428307 SDHAF1A6NFY7 115 aa7.6□□□□□ -1.19
HDAC9-210ENST00000428307 M0QY20 66 aa7.6□□□□□ -1.19
HDAC9-210ENST00000428307 ATP5LO75964 103 aa7.6□□□□□ -1.19
HDAC9-210ENST00000428307 INSP01308 110 aa7.6□□□□□ -1.19
HDAC9-210ENST00000428307 IGLV1-51P01701 117 aa7.6□□□□□ -1.19
HDAC9-210ENST00000428307 ODF1Q14990 250 aa7.6□□□□□ -1.19
HDAC9-210ENST00000428307 ANKRD39Q53RE8 183 aa7.6□□□□□ -1.19
HDAC9-210ENST00000428307 VWFP04275 2813 aa7.59□□□□□ -1.19
HDAC9-210ENST00000428307 SLC25A34Q6PIV7 304 aa7.59□□□□□ -1.19
HDAC9-210ENST00000428307 C2orf66Q6UXQ4 117 aa7.59□□□□□ -1.19
HDAC9-210ENST00000428307 SCGB3A1Q96QR1 104 aa7.59□□□□□ -1.19
HDAC9-210ENST00000428307 TENM1Q9UKZ4 2725 aa7.59□□□□□ -1.2
HDAC9-210ENST00000428307 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.59□□□□□ -1.2
HDAC9-210ENST00000428307 PF4P02776 101 aa7.59□□□□□ -1.2
HDAC9-210ENST00000428307 AZU1P20160 251 aa7.59□□□□□ -1.2
HDAC9-210ENST00000428307 HINT1P49773 126 aaPredicted RBP7.59□□□□□ -1.2
HDAC9-210ENST00000428307 POLR2KP53803 58 aaKnown RBP7.59□□□□□ -1.2
HDAC9-210ENST00000428307 TRPT1Q86TN4 253 aaKnown RBP7.59□□□□□ -1.2
HDAC9-210ENST00000428307 VCYO14598 125 aa7.58□□□□□ -1.2
HDAC9-210ENST00000428307 MORN3Q6PF18 240 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-210ENST00000428307 TOMM6Q96B49 74 aa7.58□□□□□ -1.2
HDAC9-210ENST00000428307 KIR2DL4Q99706 377 aa7.58□□□□□ -1.2
HDAC9-210ENST00000428307 MRPL35Q9NZE8 188 aaKnown RBP7.58□□□□□ -1.2
HDAC9-210ENST00000428307 M0R2P5 195 aa7.57□□□□□ -1.2
HDAC9-210ENST00000428307 NUTF2P61970 127 aaKnown RBP7.57□□□□□ -1.2
HDAC9-210ENST00000428307 ZNF415Q09FC8 603 aa7.57□□□□□ -1.2
HDAC9-210ENST00000428307 NDUFA11Q86Y39 141 aa7.57□□□□□ -1.2
HDAC9-210ENST00000428307 C1orf158Q8N1D5 194 aa7.57□□□□□ -1.2
HDAC9-210ENST00000428307 MRPS16Q9Y3D3 137 aaKnown RBP7.57□□□□□ -1.2
HDAC9-210ENST00000428307 ATRQ13535 2644 aa7.57□□□□□ -1.2
HDAC9-210ENST00000428307 K7EMI3 77 aa7.57□□□□□ -1.2
HDAC9-210ENST00000428307 P0DMU3 169 aa7.57□□□□□ -1.2
HDAC9-210ENST00000428307 FAM231AP0DMU4 169 aa7.57□□□□□ -1.2
HDAC9-210ENST00000428307 FAM231CP0DMU5 169 aa7.57□□□□□ -1.2
HDAC9-210ENST00000428307 RPL35AP18077 110 aaKnown RBP7.57□□□□□ -1.2
HDAC9-210ENST00000428307 LCE2DQ5TA82 110 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-210ENST00000428307 C11orf72Q8NBR9 251 aa7.57□□□□□ -1.2
HDAC9-210ENST00000428307 MRPL16Q9NX20 251 aaKnown RBP7.57□□□□□ -1.2
HDAC9-210ENST00000428307 HHLA3Q9XRX5 114 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms