RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 C14orf178Q8N769 122 aaPredicted RBP11.47□□□□□ -0.57
DDR1-235ENST00000428153 FMC1Q96HJ9 113 aa11.47□□□□□ -0.57
DDR1-235ENST00000428153 JPT2Q9H910 190 aa11.47□□□□□ -0.57
DDR1-235ENST00000428153 Q9UF83 564 aa11.47□□□□□ -0.57
DDR1-235ENST00000428153 TRBV6-1A0A0K0K1D8 114 aa11.46□□□□□ -0.57
DDR1-235ENST00000428153 RNF222A6NCQ9 220 aa11.46□□□□□ -0.57
DDR1-235ENST00000428153 J3QL48 77 aa11.46□□□□□ -0.57
DDR1-235ENST00000428153 CRIP1P50238 77 aa11.46□□□□□ -0.57
DDR1-235ENST00000428153 FAM162BQ5T6X4 162 aa11.46□□□□□ -0.57
DDR1-235ENST00000428153 DEFB104AQ8WTQ1 72 aa11.46□□□□□ -0.57
DDR1-235ENST00000428153 ZC2HC1AQ96GY0 325 aa11.46□□□□□ -0.57
DDR1-235ENST00000428153 SFRP2Q96HF1 295 aa11.46□□□□□ -0.57
DDR1-235ENST00000428153 PHLDA3Q9Y5J5 127 aa11.46□□□□□ -0.57
DDR1-235ENST00000428153 KRTAP29-1A8MX34 341 aaPredicted RBP11.45□□□□□ -0.58
DDR1-235ENST00000428153 FHITP49789 147 aa11.45□□□□□ -0.58
DDR1-235ENST00000428153 ZNF674Q2M3X9 581 aa11.45□□□□□ -0.58
DDR1-235ENST00000428153 LINC01559Q495D7 138 aa11.45□□□□□ -0.58
DDR1-235ENST00000428153 Q5BKY6 102 aa11.45□□□□□ -0.58
DDR1-235ENST00000428153 ATRAIDQ6UW56 229 aa11.45□□□□□ -0.58
DDR1-235ENST00000428153 LINC00528Q8N1L1 170 aa11.45□□□□□ -0.58
DDR1-235ENST00000428153 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.44□□□□□ -0.58
DDR1-235ENST00000428153 LECT2O14960 151 aa11.44□□□□□ -0.58
DDR1-235ENST00000428153 SH2D1AO60880 128 aa11.44□□□□□ -0.58
DDR1-235ENST00000428153 TPT1P13693 172 aaKnown RBP11.44□□□□□ -0.58
DDR1-235ENST00000428153 UBE2G2P60604 165 aa11.44□□□□□ -0.58
DDR1-235ENST00000428153 AKR1C8PQ5T2L2 129 aa11.44□□□□□ -0.58
DDR1-235ENST00000428153 ZFP82Q8N141 532 aa11.44□□□□□ -0.58
DDR1-235ENST00000428153 BAALCQ8WXS3 180 aa11.44□□□□□ -0.58
DDR1-235ENST00000428153 A0A087WX48 190 aa11.43□□□□□ -0.58
DDR1-235ENST00000428153 M0R036 132 aa11.43□□□□□ -0.58
DDR1-235ENST00000428153 UBE2G1P62253 170 aa11.43□□□□□ -0.58
DDR1-235ENST00000428153 RPL36AP83881 106 aaKnown RBP11.43□□□□□ -0.58
DDR1-235ENST00000428153 Q0VG73 95 aa11.43□□□□□ -0.58
DDR1-235ENST00000428153 FAM74A4Q5TZK3 123 aa11.43□□□□□ -0.58
DDR1-235ENST00000428153 KCNIP4Q6PIL6 250 aa11.43□□□□□ -0.58
DDR1-235ENST00000428153 RPL36ALQ969Q0 106 aaKnown RBP11.43□□□□□ -0.58
DDR1-235ENST00000428153 TRBV7-3A0A075B6L6 115 aa11.42□□□□□ -0.58
DDR1-235ENST00000428153 IGKV2D-24A0A075B6R9 120 aa11.42□□□□□ -0.58
DDR1-235ENST00000428153 RBFOX3A6NFN3 312 aa11.42□□□□□ -0.58
DDR1-235ENST00000428153 LTAP01374 205 aa11.42□□□□□ -0.58
DDR1-235ENST00000428153 OR10G8Q8NGN5 311 aa11.42□□□□□ -0.58
DDR1-235ENST00000428153 KLK12Q9UKR0 248 aa11.42□□□□□ -0.58
DDR1-235ENST00000428153 FXYD6-FXYD2A0A087WZ82 144 aa11.41□□□□□ -0.58
DDR1-235ENST00000428153 UBE2D3P61077 147 aa11.41□□□□□ -0.58
DDR1-235ENST00000428153 UBE2D2P62837 147 aa11.41□□□□□ -0.58
DDR1-235ENST00000428153 C14orf177Q52M58 125 aa11.41□□□□□ -0.58
DDR1-235ENST00000428153 SCXQ7RTU7 201 aa11.41□□□□□ -0.58
DDR1-235ENST00000428153 CHAC1Q9BUX1 264 aa11.41□□□□□ -0.58
DDR1-235ENST00000428153 A0A087WWL8 130 aa11.4□□□□□ -0.58
DDR1-235ENST00000428153 GRIFINA4D1Z8 144 aa11.4□□□□□ -0.58
DDR1-235ENST00000428153 MAP1LC3B2A6NCE7 125 aa11.4□□□□□ -0.58
DDR1-235ENST00000428153 M0R381 172 aa11.4□□□□□ -0.58
DDR1-235ENST00000428153 CXCL1P09341 107 aa11.4□□□□□ -0.58
DDR1-235ENST00000428153 STOML3Q8TAV4 291 aa11.4□□□□□ -0.58
DDR1-235ENST00000428153 UBE2WQ96B02 151 aa11.4□□□□□ -0.58
DDR1-235ENST00000428153 MAP1LC3BQ9GZQ8 125 aa11.4□□□□□ -0.58
DDR1-235ENST00000428153 S100A9P06702 114 aaKnown RBP11.38□□□□□ -0.59
DDR1-235ENST00000428153 RAB4BP61018 213 aa11.38□□□□□ -0.59
DDR1-235ENST00000428153 PKIAP61925 76 aa11.38□□□□□ -0.59
DDR1-235ENST00000428153 TRBV6-8A0A0A6YYG3 113 aa11.37□□□□□ -0.59
DDR1-235ENST00000428153 AKR1C3P42330 323 aa11.37□□□□□ -0.59
DDR1-235ENST00000428153 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.37□□□□□ -0.59
DDR1-235ENST00000428153 C1orf43Q9BWL3 253 aa11.37□□□□□ -0.59
DDR1-235ENST00000428153 LRP1Q07954 4544 aaKnown RBP11.36□□□□□ -0.59
DDR1-235ENST00000428153 LINC01620Q4KN68 170 aa11.36□□□□□ -0.59
DDR1-235ENST00000428153 CST9LP1Q5W188 147 aa11.36□□□□□ -0.59
DDR1-235ENST00000428153 PRR27Q6MZM9 219 aa11.36□□□□□ -0.59
DDR1-235ENST00000428153 DNAJC30Q96LL9 226 aa11.36□□□□□ -0.59
DDR1-235ENST00000428153 CYTL1Q9NRR1 136 aa11.36□□□□□ -0.59
DDR1-235ENST00000428153 TMSB15BA0A087X1C1 80 aa11.35□□□□□ -0.59
DDR1-235ENST00000428153 G3V3Q6 166 aa11.35□□□□□ -0.59
DDR1-235ENST00000428153 IGLV2-8P01709 118 aa11.35□□□□□ -0.59
DDR1-235ENST00000428153 KRTAP10-4P60372 401 aaPredicted RBP11.35□□□□□ -0.59
DDR1-235ENST00000428153 TMEM97Q5BJF2 176 aa11.35□□□□□ -0.59
DDR1-235ENST00000428153 CIRBP-AS1Q8TBR5 109 aa11.35□□□□□ -0.59
DDR1-235ENST00000428153 SSBP4Q9BWG4 385 aaPredicted RBP11.35□□□□□ -0.59
DDR1-235ENST00000428153 SNAI2O43623 268 aa11.34□□□□□ -0.59
DDR1-235ENST00000428153 CRPP02741 224 aa11.34□□□□□ -0.59
DDR1-235ENST00000428153 OR5AL1P0C617 328 aa11.34□□□□□ -0.59
DDR1-235ENST00000428153 NEXN-AS1Q8NBZ9 246 aa11.34□□□□□ -0.59
DDR1-235ENST00000428153 MLST8Q9BVC4 326 aa11.34□□□□□ -0.59
DDR1-235ENST00000428153 ZNF471Q9BX82 626 aaPredicted RBP11.34□□□□□ -0.59
DDR1-235ENST00000428153 TMEM262E9PQX1 116 aa11.33□□□□□ -0.6
DDR1-235ENST00000428153 OXTP01178 125 aa11.33□□□□□ -0.6
DDR1-235ENST00000428153 MIAQ16674 131 aa11.33□□□□□ -0.6
DDR1-235ENST00000428153 SERTAD4-AS1Q5TG53 156 aa11.33□□□□□ -0.6
DDR1-235ENST00000428153 ENHOQ6UWT2 76 aa11.33□□□□□ -0.6
DDR1-235ENST00000428153 VAX2Q9UIW0 290 aa11.33□□□□□ -0.6
DDR1-235ENST00000428153 UMAD1C9J7I0 102 aa11.32□□□□□ -0.6
DDR1-235ENST00000428153 ARPC5O15511 151 aa11.32□□□□□ -0.6
DDR1-235ENST00000428153 ZNF56Q15929 161 aa11.32□□□□□ -0.6
DDR1-235ENST00000428153 OR10AG1Q8NH19 301 aa11.32□□□□□ -0.6
DDR1-235ENST00000428153 MBD3L1Q8WWY6 194 aa11.32□□□□□ -0.6
DDR1-235ENST00000428153 PAGE4O60829 102 aa11.31□□□□□ -0.6
DDR1-235ENST00000428153 ZNF345Q14585 488 aa11.31□□□□□ -0.6
DDR1-235ENST00000428153 MPV17L2Q567V2 206 aa11.31□□□□□ -0.6
DDR1-235ENST00000428153 DGAT2L7PQ6IED9 249 aa11.31□□□□□ -0.6
DDR1-235ENST00000428153 C15orf54Q8N8G6 183 aa11.31□□□□□ -0.6
DDR1-235ENST00000428153 FAT3Q8TDW7 4589 aa11.31□□□□□ -0.6
DDR1-235ENST00000428153 ANGP03950 147 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms