RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 C7orf71A4D174 169 aa11.75□□□□□ -0.53
TVP23C-203ENST00000428082 CBY3A6NI87 242 aa11.75□□□□□ -0.53
TVP23C-203ENST00000428082 A0A1W2PRX2 142 aa11.74□□□□□ -0.53
TVP23C-203ENST00000428082 DEFB136Q30KP8 78 aa11.74□□□□□ -0.53
TVP23C-203ENST00000428082 TM4SF20Q53R12 229 aa11.74□□□□□ -0.53
TVP23C-203ENST00000428082 KLHL30-AS1Q8NEE0 82 aa11.74□□□□□ -0.53
TVP23C-203ENST00000428082 C4orf3Q8WVX3 66 aa11.74□□□□□ -0.53
TVP23C-203ENST00000428082 WFDC12Q8WWY7 111 aa11.74□□□□□ -0.53
TVP23C-203ENST00000428082 HHLA3Q9XRX5 114 aa11.74□□□□□ -0.53
TVP23C-203ENST00000428082 TENM1Q9UKZ4 2725 aa11.74□□□□□ -0.53
TVP23C-203ENST00000428082 FBN1P35555 2871 aaKnown RBP11.74□□□□□ -0.53
TVP23C-203ENST00000428082 RNASE4P34096 147 aaKnown RBP11.74□□□□□ -0.53
TVP23C-203ENST00000428082 ANXA2RQ3ZCQ2 193 aa11.74□□□□□ -0.53
TVP23C-203ENST00000428082 ADAMTSL5Q6ZMM2 481 aa11.74□□□□□ -0.53
TVP23C-203ENST00000428082 TSSC4Q9Y5U2 329 aaPredicted RBP11.74□□□□□ -0.53
TVP23C-203ENST00000428082 IGHV4OR15-8A0A075B7B6 117 aa11.73□□□□□ -0.53
TVP23C-203ENST00000428082 A0A087WW49 117 aa11.73□□□□□ -0.53
TVP23C-203ENST00000428082 TRAV12-1A0A0B4J245 112 aa11.73□□□□□ -0.53
TVP23C-203ENST00000428082 TRAV26-2A0A0B4J265 109 aa11.73□□□□□ -0.53
TVP23C-203ENST00000428082 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.73□□□□□ -0.53
TVP23C-203ENST00000428082 PLNP26678 52 aa11.73□□□□□ -0.53
TVP23C-203ENST00000428082 SUMO2P61956 95 aaKnown RBP11.73□□□□□ -0.53
TVP23C-203ENST00000428082 A0A087WX48 190 aa11.72□□□□□ -0.53
TVP23C-203ENST00000428082 LINC01549A6NIU2 74 aa11.72□□□□□ -0.53
TVP23C-203ENST00000428082 J3KRW8 73 aa11.72□□□□□ -0.53
TVP23C-203ENST00000428082 Q6ZQT7 251 aa11.72□□□□□ -0.53
TVP23C-203ENST00000428082 PCP2Q8IVA1 136 aa11.72□□□□□ -0.53
TVP23C-203ENST00000428082 DUX3Q96PT4 197 aa11.72□□□□□ -0.53
TVP23C-203ENST00000428082 C9orf118A6NHY6 69 aa11.71□□□□□ -0.53
TVP23C-203ENST00000428082 AMMECR1LQ6DCA0 310 aa11.71□□□□□ -0.53
TVP23C-203ENST00000428082 GTF2H5Q6ZYL4 71 aa11.71□□□□□ -0.53
TVP23C-203ENST00000428082 POM121L12Q8N7R1 296 aa11.71□□□□□ -0.53
TVP23C-203ENST00000428082 OR11H1Q8NG94 326 aa11.71□□□□□ -0.53
TVP23C-203ENST00000428082 ODF3Q96PU9 254 aa11.71□□□□□ -0.53
TVP23C-203ENST00000428082 ADARB2-AS1A8MUL3 147 aa11.7□□□□□ -0.54
TVP23C-203ENST00000428082 KLLNB2CW77 178 aa11.7□□□□□ -0.54
TVP23C-203ENST00000428082 NXPH4O95158 308 aa11.7□□□□□ -0.54
TVP23C-203ENST00000428082 H7C1H1 209 aa11.7□□□□□ -0.54
TVP23C-203ENST00000428082 ZC2HC1BQ5TFG8 222 aa11.7□□□□□ -0.54
TVP23C-203ENST00000428082 FAM159AQ6UWV7 190 aa11.7□□□□□ -0.54
TVP23C-203ENST00000428082 RASL10AQ92737 203 aa11.7□□□□□ -0.54
TVP23C-203ENST00000428082 TOMM6Q96B49 74 aa11.7□□□□□ -0.54
TVP23C-203ENST00000428082 HOXD3P31249 432 aaPredicted RBP11.69□□□□□ -0.54
TVP23C-203ENST00000428082 RPL32P62910 135 aaKnown RBP11.69□□□□□ -0.54
TVP23C-203ENST00000428082 NSUN5P1Q3KNT7 163 aa11.69□□□□□ -0.54
TVP23C-203ENST00000428082 C14orf178Q8N769 122 aaPredicted RBP11.69□□□□□ -0.54
TVP23C-203ENST00000428082 RAX2Q96IS3 184 aa11.69□□□□□ -0.54
TVP23C-203ENST00000428082 LINC01619G3V211 115 aa11.68□□□□□ -0.54
TVP23C-203ENST00000428082 MGPP08493 103 aa11.68□□□□□ -0.54
TVP23C-203ENST00000428082 SCGB3A1Q96QR1 104 aa11.68□□□□□ -0.54
TVP23C-203ENST00000428082 MRPL35Q9NZE8 188 aaKnown RBP11.68□□□□□ -0.54
TVP23C-203ENST00000428082 IGKV3-7A0A075B6H7 116 aa11.68□□□□□ -0.54
TVP23C-203ENST00000428082 F6UB75 175 aa11.68□□□□□ -0.54
TVP23C-203ENST00000428082 F8VRH5 84 aa11.68□□□□□ -0.54
TVP23C-203ENST00000428082 RNASE3P12724 160 aaKnown RBP11.68□□□□□ -0.54
TVP23C-203ENST00000428082 SLURP1P55000 103 aa11.68□□□□□ -0.54
TVP23C-203ENST00000428082 GTSCR1Q86UQ5 136 aa11.68□□□□□ -0.54
TVP23C-203ENST00000428082 DCANP1Q8TF63 244 aa11.68□□□□□ -0.54
TVP23C-203ENST00000428082 CITED1Q99966 193 aa11.68□□□□□ -0.54
TVP23C-203ENST00000428082 TRAV8-6A0A0B4J262 113 aa11.67□□□□□ -0.54
TVP23C-203ENST00000428082 GAGE10A6NGK3 116 aa11.67□□□□□ -0.54
TVP23C-203ENST00000428082 TCTAP57738 103 aa11.67□□□□□ -0.54
TVP23C-203ENST00000428082 SNRPD3P62318 126 aaKnown RBP11.67□□□□□ -0.54
TVP23C-203ENST00000428082 TAL2Q16559 108 aa11.67□□□□□ -0.54
TVP23C-203ENST00000428082 NDUFA11Q86Y39 141 aa11.67□□□□□ -0.54
TVP23C-203ENST00000428082 GNRH2O43555 120 aa11.66□□□□□ -0.54
TVP23C-203ENST00000428082 SYNJ2BPP57105 145 aa11.66□□□□□ -0.54
TVP23C-203ENST00000428082 CHAC1Q9BUX1 264 aa11.66□□□□□ -0.54
TVP23C-203ENST00000428082 WNK1Q9H4A3 2382 aa11.66□□□□□ -0.54
TVP23C-203ENST00000428082 IGKV2D-26A0A0A0MRZ7 120 aa11.66□□□□□ -0.54
TVP23C-203ENST00000428082 CCL24O00175 119 aa11.66□□□□□ -0.54
TVP23C-203ENST00000428082 SMIM13P0DJ93 91 aa11.66□□□□□ -0.54
TVP23C-203ENST00000428082 FHL3Q13643 280 aa11.66□□□□□ -0.54
TVP23C-203ENST00000428082 CHTOPQ9Y3Y2 248 aaKnown RBP11.66□□□□□ -0.54
TVP23C-203ENST00000428082 ERASQ7Z444 233 aa11.65□□□□□ -0.54
TVP23C-203ENST00000428082 TRBV25-1A0A075B6N4 114 aa11.64□□□□□ -0.55
TVP23C-203ENST00000428082 LGALS9O00182 355 aa11.64□□□□□ -0.55
TVP23C-203ENST00000428082 EDN2P20800 178 aa11.64□□□□□ -0.55
TVP23C-203ENST00000428082 DEFB1P60022 68 aa11.64□□□□□ -0.55
TVP23C-203ENST00000428082 DLX4Q92988 240 aaPredicted RBP11.64□□□□□ -0.55
TVP23C-203ENST00000428082 DUSP14O95147 198 aaKnown RBP11.64□□□□□ -0.55
TVP23C-203ENST00000428082 C2orf66Q6UXQ4 117 aa11.64□□□□□ -0.55
TVP23C-203ENST00000428082 SYT8Q8NBV8 401 aa11.64□□□□□ -0.55
TVP23C-203ENST00000428082 NEXN-AS1Q8NBZ9 246 aa11.64□□□□□ -0.55
TVP23C-203ENST00000428082 RPL39LQ96EH5 51 aaKnown RBP11.64□□□□□ -0.55
TVP23C-203ENST00000428082 GCSHP23434 173 aa11.63□□□□□ -0.55
TVP23C-203ENST00000428082 TM2D2Q9BX73 214 aa11.63□□□□□ -0.55
TVP23C-203ENST00000428082 KIF25-AS1Q9Y6Z4 181 aa11.63□□□□□ -0.55
TVP23C-203ENST00000428082 COL6A5A8TX70 2615 aa11.63□□□□□ -0.55
TVP23C-203ENST00000428082 H3BUT2 72 aa11.62□□□□□ -0.55
TVP23C-203ENST00000428082 OR5A1Q8NGJ0 315 aa11.62□□□□□ -0.55
TVP23C-203ENST00000428082 RNASE8Q8TDE3 154 aaKnown RBP11.62□□□□□ -0.55
TVP23C-203ENST00000428082 CSTL1Q9H114 145 aa11.62□□□□□ -0.55
TVP23C-203ENST00000428082 A0A0J9YX75 114 aa11.62□□□□□ -0.55
TVP23C-203ENST00000428082 GAGE12BA1L429 117 aa11.62□□□□□ -0.55
TVP23C-203ENST00000428082 K7EP34 96 aa11.62□□□□□ -0.55
TVP23C-203ENST00000428082 K7EQG2 157 aa11.62□□□□□ -0.55
TVP23C-203ENST00000428082 VCYO14598 125 aa11.62□□□□□ -0.55
TVP23C-203ENST00000428082 CD7P09564 240 aa11.62□□□□□ -0.55
TVP23C-203ENST00000428082 PAPPA-AS1Q5QFB9 102 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms