RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 UCNP55089 124 aa10.78□□□□□ -0.68
ERCC3-202ENST00000426778 FOXI2Q6ZQN5 318 aa10.78□□□□□ -0.68
ERCC3-202ENST00000426778 MAPK1IP1LQ8NDC0 245 aa10.78□□□□□ -0.68
ERCC3-202ENST00000426778 APOMO95445 188 aa10.78□□□□□ -0.68
ERCC3-202ENST00000426778 KLK9Q2XQG4 91 aa10.78□□□□□ -0.68
ERCC3-202ENST00000426778 KLK9Q9UKQ9 250 aa10.78□□□□□ -0.68
ERCC3-202ENST00000426778 C11orf86A6NJI1 115 aa10.78□□□□□ -0.68
ERCC3-202ENST00000426778 TSHBP01222 138 aa10.78□□□□□ -0.68
ERCC3-202ENST00000426778 CRYGDP07320 174 aa10.78□□□□□ -0.68
ERCC3-202ENST00000426778 HTN1P15515 57 aa10.78□□□□□ -0.68
ERCC3-202ENST00000426778 SRSF9Q13242 221 aaKnown RBP eCLIP10.77□□□□□ -0.69
ERCC3-202ENST00000426778 PGPEP1Q9NXJ5 209 aa10.77□□□□□ -0.69
ERCC3-202ENST00000426778 IGHV3-64A0A075B6Q5 118 aa10.77□□□□□ -0.69
ERCC3-202ENST00000426778 HIST2H2BDQ6DRA6 164 aa10.77□□□□□ -0.69
ERCC3-202ENST00000426778 FAM159AQ6UWV7 190 aa10.77□□□□□ -0.69
ERCC3-202ENST00000426778 MDFICQ9P1T7 246 aa10.77□□□□□ -0.69
ERCC3-202ENST00000426778 TSSC4Q9Y5U2 329 aaPredicted RBP10.77□□□□□ -0.69
ERCC3-202ENST00000426778 AKAP9Q99996 3911 aa10.76□□□□□ -0.69
ERCC3-202ENST00000426778 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
ERCC3-202ENST00000426778 TRAV12-1A0A0B4J245 112 aa10.76□□□□□ -0.69
ERCC3-202ENST00000426778 SMAGPQ0VAQ4 97 aa10.76□□□□□ -0.69
ERCC3-202ENST00000426778 PSMG4Q5JS54 123 aa10.76□□□□□ -0.69
ERCC3-202ENST00000426778 LOC107984156A0A0G2JMH3 177 aa10.75□□□□□ -0.69
ERCC3-202ENST00000426778 LINC01549A6NIU2 74 aa10.75□□□□□ -0.69
ERCC3-202ENST00000426778 TMEM238C9JI98 176 aa10.75□□□□□ -0.69
ERCC3-202ENST00000426778 PRM2P04554 102 aa10.75□□□□□ -0.69
ERCC3-202ENST00000426778 LINC00315P59091 139 aa10.75□□□□□ -0.69
ERCC3-202ENST00000426778 ARL17AQ8IVW1 177 aa10.75□□□□□ -0.69
ERCC3-202ENST00000426778 MRPL16Q9NX20 251 aaKnown RBP10.75□□□□□ -0.69
ERCC3-202ENST00000426778 IGHG2P01859 326 aa10.75□□□□□ -0.69
ERCC3-202ENST00000426778 ATP5J2P56134 94 aa10.75□□□□□ -0.69
ERCC3-202ENST00000426778 RRN3P1Q2M238 152 aa10.75□□□□□ -0.69
ERCC3-202ENST00000426778 TMEM170BQ5T4T1 132 aa10.75□□□□□ -0.69
ERCC3-202ENST00000426778 MORN3Q6PF18 240 aaPredicted RBP10.75□□□□□ -0.69
ERCC3-202ENST00000426778 C20orf78Q9BR46 151 aa10.75□□□□□ -0.69
ERCC3-202ENST00000426778 DAZ1Q9NQZ3 744 aaKnown RBP10.75□□□□□ -0.69
ERCC3-202ENST00000426778 LENEPQ9Y5L5 61 aa10.75□□□□□ -0.69
ERCC3-202ENST00000426778 JMJD1CQ15652 2540 aa10.75□□□□□ -0.69
ERCC3-202ENST00000426778 TSPEAR-AS2P59090 65 aa10.74□□□□□ -0.69
ERCC3-202ENST00000426778 ZFP2Q6ZN57 461 aa10.74□□□□□ -0.69
ERCC3-202ENST00000426778 CCL19Q99731 98 aa10.74□□□□□ -0.69
ERCC3-202ENST00000426778 SPANXB1Q9NS25 103 aaPredicted RBP10.74□□□□□ -0.69
ERCC3-202ENST00000426778 ZNF469Q96JG9 3925 aaPredicted RBP10.74□□□□□ -0.69
ERCC3-202ENST00000426778 SDHAF1A6NFY7 115 aa10.74□□□□□ -0.69
ERCC3-202ENST00000426778 HOXA3O43365 443 aaPredicted RBP10.74□□□□□ -0.69
ERCC3-202ENST00000426778 FAM19A4Q96LR4 140 aa10.74□□□□□ -0.69
ERCC3-202ENST00000426778 PIMREGQ9BSJ6 248 aa10.74□□□□□ -0.69
ERCC3-202ENST00000426778 KIF25-AS1Q9Y6Z4 181 aa10.74□□□□□ -0.69
ERCC3-202ENST00000426778 NAV2Q8IVL1 2488 aa10.73□□□□□ -0.69
ERCC3-202ENST00000426778 CCDC168Q8NDH2 2452 aa10.73□□□□□ -0.69
ERCC3-202ENST00000426778 IGHV3-73A0A0B4J1V6 119 aa10.73□□□□□ -0.69
ERCC3-202ENST00000426778 SPINK13Q1W4C9 94 aa10.73□□□□□ -0.69
ERCC3-202ENST00000426778 ZNF462Q96JM2 2506 aa10.73□□□□□ -0.69
ERCC3-202ENST00000426778 IGLV4-69A0A075B6H9 119 aa10.73□□□□□ -0.69
ERCC3-202ENST00000426778 ZNF56Q15929 161 aa10.73□□□□□ -0.69
ERCC3-202ENST00000426778 GAGE13Q4V321 117 aa10.73□□□□□ -0.69
ERCC3-202ENST00000426778 CLEC2AQ6UVW9 174 aa10.73□□□□□ -0.69
ERCC3-202ENST00000426778 ZNF418Q8TF45 676 aaPredicted RBP10.73□□□□□ -0.69
ERCC3-202ENST00000426778 SPAG8Q99932 426 aaPredicted RBP10.73□□□□□ -0.69
ERCC3-202ENST00000426778 A6NDX4 124 aa10.72□□□□□ -0.69
ERCC3-202ENST00000426778 IGHV4-59P01825 116 aa10.72□□□□□ -0.69
ERCC3-202ENST00000426778 PTH2Q96A98 100 aa10.72□□□□□ -0.69
ERCC3-202ENST00000426778 A0A1B0GWB2 263 aa10.72□□□□□ -0.69
ERCC3-202ENST00000426778 AZU1P20160 251 aa10.72□□□□□ -0.69
ERCC3-202ENST00000426778 ZNRF2Q8NHG8 242 aa10.71□□□□□ -0.69
ERCC3-202ENST00000426778 DCANP1Q8TF63 244 aa10.71□□□□□ -0.69
ERCC3-202ENST00000426778 USMG5Q96IX5 58 aa10.71□□□□□ -0.69
ERCC3-202ENST00000426778 PSMB2P49721 201 aa10.71□□□□□ -0.69
ERCC3-202ENST00000426778 C10orf105Q8TEF2 133 aa10.71□□□□□ -0.7
ERCC3-202ENST00000426778 ZNF580Q9UK33 172 aa10.71□□□□□ -0.7
ERCC3-202ENST00000426778 TAL2Q16559 108 aa10.7□□□□□ -0.7
ERCC3-202ENST00000426778 Q8N1Y9 231 aa10.7□□□□□ -0.7
ERCC3-202ENST00000426778 KLLNB2CW77 178 aa10.7□□□□□ -0.7
ERCC3-202ENST00000426778 COX6B1P14854 86 aa10.7□□□□□ -0.7
ERCC3-202ENST00000426778 KIR2DL4Q99706 377 aa10.7□□□□□ -0.7
ERCC3-202ENST00000426778 IGIPA6NJ69 53 aa10.69□□□□□ -0.7
ERCC3-202ENST00000426778 CRIP2P52943 208 aaPredicted RBP10.69□□□□□ -0.7
ERCC3-202ENST00000426778 SYNJ2BPP57105 145 aa10.69□□□□□ -0.7
ERCC3-202ENST00000426778 F8W1H4 67 aa10.69□□□□□ -0.7
ERCC3-202ENST00000426778 H7C2G1 150 aa10.69□□□□□ -0.7
ERCC3-202ENST00000426778 P0DMU3 169 aa10.69□□□□□ -0.7
ERCC3-202ENST00000426778 FAM231AP0DMU4 169 aa10.69□□□□□ -0.7
ERCC3-202ENST00000426778 FAM231CP0DMU5 169 aa10.69□□□□□ -0.7
ERCC3-202ENST00000426778 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
ERCC3-202ENST00000426778 RNASE13Q5GAN3 156 aaKnown RBP10.69□□□□□ -0.7
ERCC3-202ENST00000426778 TSPAN13O95857 204 aa10.68□□□□□ -0.7
ERCC3-202ENST00000426778 IGLV1-40P01703 118 aa10.68□□□□□ -0.7
ERCC3-202ENST00000426778 SAMD13Q5VXD3 122 aa10.68□□□□□ -0.7
ERCC3-202ENST00000426778 PRO0461Q9UI25 63 aa10.68□□□□□ -0.7
ERCC3-202ENST00000426778 PRRC2AP48634 2157 aaKnown RBP10.68□□□□□ -0.7
ERCC3-202ENST00000426778 GAGE12HA6NDE8 117 aa10.68□□□□□ -0.7
ERCC3-202ENST00000426778 MSMBP08118 114 aa10.68□□□□□ -0.7
ERCC3-202ENST00000426778 ADARB2-AS1A8MUL3 147 aa10.68□□□□□ -0.7
ERCC3-202ENST00000426778 PROK1P58294 105 aa10.68□□□□□ -0.7
ERCC3-202ENST00000426778 PMVKQ15126 192 aa10.68□□□□□ -0.7
ERCC3-202ENST00000426778 DEFB112Q30KQ8 113 aa10.67□□□□□ -0.7
ERCC3-202ENST00000426778 Q9UF83 564 aa10.67□□□□□ -0.7
ERCC3-202ENST00000426778 A0A0J9YY99 117 aa10.67□□□□□ -0.7
ERCC3-202ENST00000426778 KNCNA6PVL3 124 aa10.67□□□□□ -0.7
ERCC3-202ENST00000426778 SMCPP49901 116 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms