RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 IGLV1-40P01703 118 aa10.3□□□□□ -0.76
CTCFL-203ENST00000422109 TP53TG1Q9Y2A0 90 aa10.3□□□□□ -0.76
CTCFL-203ENST00000422109 RNF223E7ERA6 249 aa10.3□□□□□ -0.76
CTCFL-203ENST00000422109 PLNP26678 52 aa10.3□□□□□ -0.76
CTCFL-203ENST00000422109 ID1P41134 155 aa10.3□□□□□ -0.76
CTCFL-203ENST00000422109 DEFB136Q30KP8 78 aa10.3□□□□□ -0.76
CTCFL-203ENST00000422109 TOMM6Q96B49 74 aa10.3□□□□□ -0.76
CTCFL-203ENST00000422109 IGHV3-73A0A0B4J1V6 119 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 ZNF56Q15929 161 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 SUMO4Q6EEV6 95 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 DCANP1Q8TF63 244 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 DUX3Q96PT4 197 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 K7ERU9 68 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 HLA-DRB4P13762 266 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 SCGB1D4Q6XE38 83 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 OPRPNQ99935 248 aaPredicted RBP10.29□□□□□ -0.76
CTCFL-203ENST00000422109 HLA-DRB4X5D2U9 266 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 FBN2P35556 2912 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 TEX15Q9BXT5 2789 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 CCDC168Q8NDH2 2452 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 NEXN-AS1Q8NBZ9 246 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 PRADC1Q9BSG0 188 aa10.29□□□□□ -0.76
CTCFL-203ENST00000422109 BEX4Q9NWD9 120 aaPredicted RBP10.29□□□□□ -0.76
CTCFL-203ENST00000422109 SLC25A16P16260 332 aa10.28□□□□□ -0.76
CTCFL-203ENST00000422109 FAM19A4Q96LR4 140 aa10.28□□□□□ -0.76
CTCFL-203ENST00000422109 C20orf78Q9BR46 151 aa10.28□□□□□ -0.76
CTCFL-203ENST00000422109 ZNF815PA8K554 130 aa10.27□□□□□ -0.76
CTCFL-203ENST00000422109 PLEKHB2Q96CS7 222 aa10.27□□□□□ -0.76
CTCFL-203ENST00000422109 HIGD1BQ9P298 99 aa10.27□□□□□ -0.76
CTCFL-203ENST00000422109 H3BUA1 57 aa10.27□□□□□ -0.77
CTCFL-203ENST00000422109 KHDC1LQ5JSQ8 128 aa10.27□□□□□ -0.77
CTCFL-203ENST00000422109 C18orf65Q6ZTR6 163 aa10.27□□□□□ -0.77
CTCFL-203ENST00000422109 IGHV3-64A0A075B6Q5 118 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 MYMXA0A1B0GTQ4 84 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 SDHAF1A6NFY7 115 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 C12orf74Q32Q52 190 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 Q8N1Y9 231 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 ATP6V0BQ99437 205 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 IGHV4OR15-8A0A075B7B6 117 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 A0A087WW49 117 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 PSMB8P28062 276 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 TMEM170BQ5T4T1 132 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 KLLNB2CW77 178 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 H3BMG7 143 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 LINC00315P59091 139 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 SRSF9Q13242 221 aaKnown RBP eCLIP10.26□□□□□ -0.77
CTCFL-203ENST00000422109 ZNF479Q96JC4 524 aa10.26□□□□□ -0.77
CTCFL-203ENST00000422109 EPG5Q9HCE0 2579 aa10.25□□□□□ -0.77
CTCFL-203ENST00000422109 C11orf86A6NJI1 115 aa10.25□□□□□ -0.77
CTCFL-203ENST00000422109 CFHR3Q02985 330 aa10.25□□□□□ -0.77
CTCFL-203ENST00000422109 ZFP2Q6ZN57 461 aa10.25□□□□□ -0.77
CTCFL-203ENST00000422109 KNCNA6PVL3 124 aa10.25□□□□□ -0.77
CTCFL-203ENST00000422109 IGLL5B9A064 214 aa10.25□□□□□ -0.77
CTCFL-203ENST00000422109 LGALS1P09382 135 aaKnown RBP10.25□□□□□ -0.77
CTCFL-203ENST00000422109 PHLDA1Q8WV24 401 aaPredicted RBP10.25□□□□□ -0.77
CTCFL-203ENST00000422109 KIF25-AS1Q9Y6Z4 181 aa10.25□□□□□ -0.77
CTCFL-203ENST00000422109 TSHBP01222 138 aa10.24□□□□□ -0.77
CTCFL-203ENST00000422109 SNRPD3P62318 126 aaKnown RBP10.24□□□□□ -0.77
CTCFL-203ENST00000422109 KIR2DL4Q99706 377 aa10.24□□□□□ -0.77
CTCFL-203ENST00000422109 PRRC2AP48634 2157 aaKnown RBP10.24□□□□□ -0.77
CTCFL-203ENST00000422109 TRAV12-1A0A0B4J245 112 aa10.24□□□□□ -0.77
CTCFL-203ENST00000422109 CRYGDP07320 174 aa10.24□□□□□ -0.77
CTCFL-203ENST00000422109 TM2D2Q9BX73 214 aa10.24□□□□□ -0.77
CTCFL-203ENST00000422109 APOMO95445 188 aa10.23□□□□□ -0.77
CTCFL-203ENST00000422109 WFDC2Q14508 124 aa10.23□□□□□ -0.77
CTCFL-203ENST00000422109 C2CD3Q4AC94 2353 aa10.23□□□□□ -0.77
CTCFL-203ENST00000422109 P0DMU3 169 aa10.23□□□□□ -0.77
CTCFL-203ENST00000422109 FAM231AP0DMU4 169 aa10.23□□□□□ -0.77
CTCFL-203ENST00000422109 FAM231CP0DMU5 169 aa10.23□□□□□ -0.77
CTCFL-203ENST00000422109 SLURP1P55000 103 aa10.23□□□□□ -0.77
CTCFL-203ENST00000422109 ZNF876PQ49A33 203 aa10.23□□□□□ -0.77
CTCFL-203ENST00000422109 A0A0J9YX75 114 aa10.22□□□□□ -0.77
CTCFL-203ENST00000422109 TEX48A0A1B0GUV7 120 aa10.22□□□□□ -0.77
CTCFL-203ENST00000422109 HOXD3P31249 432 aaPredicted RBP10.22□□□□□ -0.77
CTCFL-203ENST00000422109 LINC01356Q8N9X3 169 aa10.22□□□□□ -0.77
CTCFL-203ENST00000422109 OR5A1Q8NGJ0 315 aa10.22□□□□□ -0.77
CTCFL-203ENST00000422109 IGHV3-16A0A0C4DH30 117 aa10.22□□□□□ -0.77
CTCFL-203ENST00000422109 HOXA3O43365 443 aaPredicted RBP10.22□□□□□ -0.77
CTCFL-203ENST00000422109 PROK1P58294 105 aa10.22□□□□□ -0.77
CTCFL-203ENST00000422109 SH2D6Q7Z4S9 175 aa10.22□□□□□ -0.77
CTCFL-203ENST00000422109 APRG1Q8IVJ8 170 aa10.21□□□□□ -0.77
CTCFL-203ENST00000422109 C11orf44Q8N8P7 122 aa10.21□□□□□ -0.77
CTCFL-203ENST00000422109 TRBV7-3A0A075B6L6 115 aa10.21□□□□□ -0.78
CTCFL-203ENST00000422109 K7EMT4 169 aa10.21□□□□□ -0.78
CTCFL-203ENST00000422109 VCYO14598 125 aa10.21□□□□□ -0.78
CTCFL-203ENST00000422109 KRTAP10-9P60411 292 aa10.21□□□□□ -0.78
CTCFL-203ENST00000422109 RNASE13Q5GAN3 156 aaKnown RBP10.21□□□□□ -0.78
CTCFL-203ENST00000422109 POLR2KP53803 58 aaKnown RBP10.2□□□□□ -0.78
CTCFL-203ENST00000422109 IGHV1OR15-1A0A075B7D0 117 aa10.2□□□□□ -0.78
CTCFL-203ENST00000422109 LOC107984156A0A0G2JMH3 177 aa10.2□□□□□ -0.78
CTCFL-203ENST00000422109 E9PLD3 99 aa10.2□□□□□ -0.78
CTCFL-203ENST00000422109 MED14OSP0DP75 135 aa10.2□□□□□ -0.78
CTCFL-203ENST00000422109 DEFB131AP59861 70 aa10.2□□□□□ -0.78
CTCFL-203ENST00000422109 TCTEX1D4Q5JR98 221 aa10.2□□□□□ -0.78
CTCFL-203ENST00000422109 ARL17AQ8IVW1 177 aa10.2□□□□□ -0.78
CTCFL-203ENST00000422109 PGPEP1Q9NXJ5 209 aa10.2□□□□□ -0.78
CTCFL-203ENST00000422109 IGLV4-69A0A075B6H9 119 aa10.2□□□□□ -0.78
CTCFL-203ENST00000422109 K7EQG2 157 aa10.2□□□□□ -0.78
CTCFL-203ENST00000422109 MRPL16Q9NX20 251 aaKnown RBP10.2□□□□□ -0.78
CTCFL-203ENST00000422109 CHD6Q8TD26 2715 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms