RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 BBC3Q96PG8 261 aaPredicted RBP11.43□□□□□ -0.58
SEMA3B-203ENST00000419007 IGHV1-69DA0A0B4J2H0 117 aa11.42□□□□□ -0.58
SEMA3B-203ENST00000419007 RNF223E7ERA6 249 aa11.42□□□□□ -0.58
SEMA3B-203ENST00000419007 SOCS3O14543 225 aa11.42□□□□□ -0.58
SEMA3B-203ENST00000419007 IGHV1-69P01742 117 aa11.42□□□□□ -0.58
SEMA3B-203ENST00000419007 TRAV12-3A0A0B4J271 114 aa11.42□□□□□ -0.58
SEMA3B-203ENST00000419007 C11orf86A6NJI1 115 aa11.42□□□□□ -0.58
SEMA3B-203ENST00000419007 CD7P09564 240 aa11.42□□□□□ -0.58
SEMA3B-203ENST00000419007 IGHV4-38-2P0DP08 117 aa11.42□□□□□ -0.58
SEMA3B-203ENST00000419007 TMEM170BQ5T4T1 132 aa11.42□□□□□ -0.58
SEMA3B-203ENST00000419007 MORN3Q6PF18 240 aaPredicted RBP11.42□□□□□ -0.58
SEMA3B-203ENST00000419007 Q6ZS46 218 aa11.41□□□□□ -0.58
SEMA3B-203ENST00000419007 PSMB2P49721 201 aa11.41□□□□□ -0.58
SEMA3B-203ENST00000419007 ZNF418Q8TF45 676 aaPredicted RBP11.41□□□□□ -0.58
SEMA3B-203ENST00000419007 ZNF256Q9Y2P7 627 aaPredicted RBP11.41□□□□□ -0.58
SEMA3B-203ENST00000419007 TGFAP01135 160 aa11.4□□□□□ -0.58
SEMA3B-203ENST00000419007 PPP1R17O96001 155 aa11.4□□□□□ -0.58
SEMA3B-203ENST00000419007 KIR2DL4Q99706 377 aa11.4□□□□□ -0.58
SEMA3B-203ENST00000419007 IGHV4-39P01824 125 aa11.4□□□□□ -0.59
SEMA3B-203ENST00000419007 C19orf54Q5BKX5 351 aa11.4□□□□□ -0.59
SEMA3B-203ENST00000419007 C19orf84I3L1E1 186 aa11.39□□□□□ -0.59
SEMA3B-203ENST00000419007 CRYGDP07320 174 aa11.39□□□□□ -0.59
SEMA3B-203ENST00000419007 HERVK_113P61574 105 aa11.39□□□□□ -0.59
SEMA3B-203ENST00000419007 SUMO4Q6EEV6 95 aa11.39□□□□□ -0.59
SEMA3B-203ENST00000419007 USP9YO00507 2555 aaPredicted RBP11.39□□□□□ -0.59
SEMA3B-203ENST00000419007 CELSR2Q9HCU4 2923 aa11.39□□□□□ -0.59
SEMA3B-203ENST00000419007 ZFP2Q6ZN57 461 aa11.39□□□□□ -0.59
SEMA3B-203ENST00000419007 IGHV4-61A0A0C4DH41 118 aa11.38□□□□□ -0.59
SEMA3B-203ENST00000419007 SDHAF1A6NFY7 115 aa11.38□□□□□ -0.59
SEMA3B-203ENST00000419007 TSHBP01222 138 aa11.38□□□□□ -0.59
SEMA3B-203ENST00000419007 USMG5Q96IX5 58 aa11.38□□□□□ -0.59
SEMA3B-203ENST00000419007 DAZ1Q9NQZ3 744 aaKnown RBP11.38□□□□□ -0.59
SEMA3B-203ENST00000419007 TRAV12-2A0A075B6T6 113 aa11.38□□□□□ -0.59
SEMA3B-203ENST00000419007 ZNF688P0C7X2 276 aa11.37□□□□□ -0.59
SEMA3B-203ENST00000419007 PMVKQ15126 192 aa11.37□□□□□ -0.59
SEMA3B-203ENST00000419007 DLX4Q92988 240 aaPredicted RBP11.37□□□□□ -0.59
SEMA3B-203ENST00000419007 PRO0461Q9UI25 63 aa11.37□□□□□ -0.59
SEMA3B-203ENST00000419007 POLQO75417 2590 aa11.37□□□□□ -0.59
SEMA3B-203ENST00000419007 ATP6V0BQ99437 205 aa11.37□□□□□ -0.59
SEMA3B-203ENST00000419007 DOPEY1Q5JWR5 2465 aa11.37□□□□□ -0.59
SEMA3B-203ENST00000419007 ZNF56Q15929 161 aa11.36□□□□□ -0.59
SEMA3B-203ENST00000419007 IGLV4-69A0A075B6H9 119 aa11.36□□□□□ -0.59
SEMA3B-203ENST00000419007 LINC01619G3V211 115 aa11.36□□□□□ -0.59
SEMA3B-203ENST00000419007 VCYO14598 125 aa11.36□□□□□ -0.59
SEMA3B-203ENST00000419007 TSPAN13O95857 204 aa11.36□□□□□ -0.59
SEMA3B-203ENST00000419007 MED14OSP0DP75 135 aa11.36□□□□□ -0.59
SEMA3B-203ENST00000419007 LINC00315P59091 139 aa11.36□□□□□ -0.59
SEMA3B-203ENST00000419007 OPRPNQ99935 248 aaPredicted RBP11.36□□□□□ -0.59
SEMA3B-203ENST00000419007 IGHV3-64A0A075B6Q5 118 aa11.36□□□□□ -0.59
SEMA3B-203ENST00000419007 COX6B1P14854 86 aa11.36□□□□□ -0.59
SEMA3B-203ENST00000419007 PTH2Q96A98 100 aa11.36□□□□□ -0.59
SEMA3B-203ENST00000419007 FAM19A4Q96LR4 140 aa11.36□□□□□ -0.59
SEMA3B-203ENST00000419007 KIF25-AS1Q9Y6Z4 181 aa11.36□□□□□ -0.59
SEMA3B-203ENST00000419007 IGHG2P01859 326 aa11.35□□□□□ -0.59
SEMA3B-203ENST00000419007 IGIPA6NJ69 53 aa11.35□□□□□ -0.59
SEMA3B-203ENST00000419007 ID1P41134 155 aa11.35□□□□□ -0.59
SEMA3B-203ENST00000419007 FASNP49327 2511 aaKnown RBP11.35□□□□□ -0.59
SEMA3B-203ENST00000419007 A0A0J9YY99 117 aa11.34□□□□□ -0.59
SEMA3B-203ENST00000419007 SCGB1C2P0DMR2 95 aa11.34□□□□□ -0.59
SEMA3B-203ENST00000419007 POLR2KP53803 58 aaKnown RBP11.34□□□□□ -0.59
SEMA3B-203ENST00000419007 TSPEAR-AS2P59090 65 aa11.34□□□□□ -0.59
SEMA3B-203ENST00000419007 CRIP2P52943 208 aaPredicted RBP11.34□□□□□ -0.59
SEMA3B-203ENST00000419007 MDFICQ9P1T7 246 aa11.34□□□□□ -0.59
SEMA3B-203ENST00000419007 ABCA12Q86UK0 2595 aa11.33□□□□□ -0.59
SEMA3B-203ENST00000419007 HTN1P15515 57 aa11.33□□□□□ -0.6
SEMA3B-203ENST00000419007 PAPPA-AS1Q5QFB9 102 aa11.33□□□□□ -0.6
SEMA3B-203ENST00000419007 KLLNB2CW77 178 aa11.33□□□□□ -0.6
SEMA3B-203ENST00000419007 H7C2G1 150 aa11.33□□□□□ -0.6
SEMA3B-203ENST00000419007 UBE2D1P51668 147 aa11.33□□□□□ -0.6
SEMA3B-203ENST00000419007 ZNRF2Q8NHG8 242 aa11.33□□□□□ -0.6
SEMA3B-203ENST00000419007 PIMREGQ9BSJ6 248 aa11.33□□□□□ -0.6
SEMA3B-203ENST00000419007 HELZ2Q9BYK8 2649 aaKnown RBP11.33□□□□□ -0.6
SEMA3B-203ENST00000419007 IGHV4OR15-8A0A075B7B6 117 aa11.33□□□□□ -0.6
SEMA3B-203ENST00000419007 A0A087WW49 117 aa11.33□□□□□ -0.6
SEMA3B-203ENST00000419007 LGALS3P17931 250 aaKnown RBP11.33□□□□□ -0.6
SEMA3B-203ENST00000419007 SYT8Q8NBV8 401 aa11.33□□□□□ -0.6
SEMA3B-203ENST00000419007 SMCPP49901 116 aaPredicted RBP11.32□□□□□ -0.6
SEMA3B-203ENST00000419007 FOXI1Q12951 378 aa11.32□□□□□ -0.6
SEMA3B-203ENST00000419007 CFAP126Q5VTH2 177 aa11.32□□□□□ -0.6
SEMA3B-203ENST00000419007 NDUFA11Q86Y39 141 aa11.32□□□□□ -0.6
SEMA3B-203ENST00000419007 APRG1Q8IVJ8 170 aa11.32□□□□□ -0.6
SEMA3B-203ENST00000419007 PTPN13Q12923 2485 aa11.32□□□□□ -0.6
SEMA3B-203ENST00000419007 SPATA25Q9BR10 227 aa11.31□□□□□ -0.6
SEMA3B-203ENST00000419007 SPINK13Q1W4C9 94 aa11.31□□□□□ -0.6
SEMA3B-203ENST00000419007 TMEM141Q96I45 108 aa11.31□□□□□ -0.6
SEMA3B-203ENST00000419007 C1QTNF4Q9BXJ3 329 aa11.31□□□□□ -0.6
SEMA3B-203ENST00000419007 NOTCH3Q9UM47 2321 aa11.31□□□□□ -0.6
SEMA3B-203ENST00000419007 A6NDX4 124 aa11.31□□□□□ -0.6
SEMA3B-203ENST00000419007 J3QQQ9 107 aa11.31□□□□□ -0.6
SEMA3B-203ENST00000419007 NXPH4O95158 308 aa11.31□□□□□ -0.6
SEMA3B-203ENST00000419007 C10orf99Q6UWK7 81 aa11.31□□□□□ -0.6
SEMA3B-203ENST00000419007 RAX2Q96IS3 184 aa11.31□□□□□ -0.6
SEMA3B-203ENST00000419007 NFE4Q86UQ8 179 aa11.3□□□□□ -0.6
SEMA3B-203ENST00000419007 DCANP1Q8TF63 244 aa11.3□□□□□ -0.6
SEMA3B-203ENST00000419007 H3BUA1 57 aa11.3□□□□□ -0.6
SEMA3B-203ENST00000419007 Q8N1Y9 231 aa11.3□□□□□ -0.6
SEMA3B-203ENST00000419007 TRBV7-9A0A0J9YWB2 115 aa11.29□□□□□ -0.6
SEMA3B-203ENST00000419007 CFC1BP0CG36 223 aa11.29□□□□□ -0.6
SEMA3B-203ENST00000419007 CFC1P0CG37 223 aa11.29□□□□□ -0.6
SEMA3B-203ENST00000419007 ATP5J2P56134 94 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms