RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 ST20Q9HBF5 79 aa6.65□□□□□ -1.34
LINCMD1-201ENST00000418518 MDFICQ9P1T7 246 aa6.65□□□□□ -1.34
LINCMD1-201ENST00000418518 TIMM8BQ9Y5J9 83 aaPredicted RBP6.65□□□□□ -1.34
LINCMD1-201ENST00000418518 CUBNO60494 3623 aa6.64□□□□□ -1.35
LINCMD1-201ENST00000418518 TRBV6-5A0A0K0K1A5 114 aa6.64□□□□□ -1.35
LINCMD1-201ENST00000418518 SPRY2O43597 315 aa6.64□□□□□ -1.35
LINCMD1-201ENST00000418518 IGLV1-51P01701 117 aa6.64□□□□□ -1.35
LINCMD1-201ENST00000418518 SUMO2P61956 95 aaKnown RBP6.64□□□□□ -1.35
LINCMD1-201ENST00000418518 LAGE3Q14657 143 aa6.64□□□□□ -1.35
LINCMD1-201ENST00000418518 LBHQ53QV2 105 aaPredicted RBP6.64□□□□□ -1.35
LINCMD1-201ENST00000418518 TRPT1Q86TN4 253 aaKnown RBP6.64□□□□□ -1.35
LINCMD1-201ENST00000418518 IFI27L1Q96BM0 104 aa6.64□□□□□ -1.35
LINCMD1-201ENST00000418518 UQCR10Q9UDW1 63 aa6.64□□□□□ -1.35
LINCMD1-201ENST00000418518 CRYGDP07320 174 aa6.63□□□□□ -1.35
LINCMD1-201ENST00000418518 SMIM17P0DL12 118 aa6.63□□□□□ -1.35
LINCMD1-201ENST00000418518 IGLL1P15814 213 aa6.63□□□□□ -1.35
LINCMD1-201ENST00000418518 KRTAP10-3P60369 221 aa6.63□□□□□ -1.35
LINCMD1-201ENST00000418518 ZNF124Q15973 351 aa6.63□□□□□ -1.35
LINCMD1-201ENST00000418518 BEAN1Q3B7T3 259 aa6.63□□□□□ -1.35
LINCMD1-201ENST00000418518 ZNF705AQ6ZN79 300 aaPredicted RBP6.63□□□□□ -1.35
LINCMD1-201ENST00000418518 ATOH7Q8N100 152 aa6.63□□□□□ -1.35
LINCMD1-201ENST00000418518 TMEM158Q8WZ71 300 aa6.63□□□□□ -1.35
LINCMD1-201ENST00000418518 HIVEP1P15822 2718 aa6.63□□□□□ -1.35
LINCMD1-201ENST00000418518 OR11H12B2RN74 326 aa6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 INAFM1C9JVW0 142 aa6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 ATP5LO75964 103 aa6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 INSP01308 110 aa6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 MGPP08493 103 aa6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 POLR2KP53803 58 aaKnown RBP6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 ZNF415Q09FC8 603 aa6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 MAJINQ3KP22 176 aa6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 ORMDL2Q53FV1 153 aa6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 SUMO4Q6EEV6 95 aa6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 RPL39LQ96EH5 51 aaKnown RBP6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 C2orf88Q9BSF0 95 aa6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 ZMAT4Q9H898 229 aa6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 JPT2Q9H910 190 aa6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 C19orf73Q9NVV2 129 aa6.62□□□□□ -1.35
LINCMD1-201ENST00000418518 LINC01549A6NIU2 74 aa6.61□□□□□ -1.35
LINCMD1-201ENST00000418518 CRLF1O75462 422 aa6.61□□□□□ -1.35
LINCMD1-201ENST00000418518 FXYD7P58549 80 aa6.61□□□□□ -1.35
LINCMD1-201ENST00000418518 ODF1Q14990 250 aa6.61□□□□□ -1.35
LINCMD1-201ENST00000418518 LINC00482Q8N8I6 264 aa6.61□□□□□ -1.35
LINCMD1-201ENST00000418518 C11orf72Q8NBR9 251 aa6.61□□□□□ -1.35
LINCMD1-201ENST00000418518 IL17DQ8TAD2 202 aa6.61□□□□□ -1.35
LINCMD1-201ENST00000418518 SPXQ9BT56 116 aa6.61□□□□□ -1.35
LINCMD1-201ENST00000418518 GOLT1BQ9Y3E0 138 aa6.61□□□□□ -1.35
LINCMD1-201ENST00000418518 JMJD1CQ15652 2540 aa6.61□□□□□ -1.35
LINCMD1-201ENST00000418518 CBY3A6NI87 242 aa6.6□□□□□ -1.35
LINCMD1-201ENST00000418518 HSBP1L1C9JCN9 74 aa6.6□□□□□ -1.35
LINCMD1-201ENST00000418518 M0QY20 66 aa6.6□□□□□ -1.35
LINCMD1-201ENST00000418518 M0R2P5 195 aa6.6□□□□□ -1.35
LINCMD1-201ENST00000418518 EREGO14944 169 aa6.6□□□□□ -1.35
LINCMD1-201ENST00000418518 SAP30O75446 220 aa6.6□□□□□ -1.35
LINCMD1-201ENST00000418518 NSUN5P1Q3KNT7 163 aa6.6□□□□□ -1.35
LINCMD1-201ENST00000418518 ZNF876PQ49A33 203 aa6.6□□□□□ -1.35
LINCMD1-201ENST00000418518 UFSP1Q6NVU6 142 aa6.6□□□□□ -1.35
LINCMD1-201ENST00000418518 STHQ8IWL8 128 aa6.6□□□□□ -1.35
LINCMD1-201ENST00000418518 TOMM6Q96B49 74 aa6.6□□□□□ -1.35
LINCMD1-201ENST00000418518 SNHG12Q9BXW3 62 aa6.6□□□□□ -1.35
LINCMD1-201ENST00000418518 MRPS16Q9Y3D3 137 aaKnown RBP6.6□□□□□ -1.35
LINCMD1-201ENST00000418518 A0A087WWL8 130 aa6.59□□□□□ -1.35
LINCMD1-201ENST00000418518 TRAV12-1A0A0B4J245 112 aa6.59□□□□□ -1.35
LINCMD1-201ENST00000418518 TRBV27A0A0K0K1C4 114 aa6.59□□□□□ -1.35
LINCMD1-201ENST00000418518 hDV102S1A0JD36 115 aa6.59□□□□□ -1.35
LINCMD1-201ENST00000418518 A8MWV9 139 aa6.59□□□□□ -1.35
LINCMD1-201ENST00000418518 M0R143 59 aa6.59□□□□□ -1.35
LINCMD1-201ENST00000418518 TCAPO15273 167 aa6.59□□□□□ -1.35
LINCMD1-201ENST00000418518 G0S2P27469 103 aa6.59□□□□□ -1.35
LINCMD1-201ENST00000418518 RIPPLY3P57055 190 aa6.59□□□□□ -1.35
LINCMD1-201ENST00000418518 MORN3Q6PF18 240 aaPredicted RBP6.59□□□□□ -1.35
LINCMD1-201ENST00000418518 C1orf158Q8N1D5 194 aa6.59□□□□□ -1.35
LINCMD1-201ENST00000418518 CSTL1Q9H114 145 aa6.59□□□□□ -1.35
LINCMD1-201ENST00000418518 SDHAF1A6NFY7 115 aa6.58□□□□□ -1.36
LINCMD1-201ENST00000418518 VCYO14598 125 aa6.58□□□□□ -1.36
LINCMD1-201ENST00000418518 NUDT3O95989 172 aa6.58□□□□□ -1.36
LINCMD1-201ENST00000418518 NUTF2P61970 127 aaKnown RBP6.58□□□□□ -1.36
LINCMD1-201ENST00000418518 RHOHQ15669 191 aa6.58□□□□□ -1.36
LINCMD1-201ENST00000418518 PMCHL2Q9BQD1 86 aa6.58□□□□□ -1.36
LINCMD1-201ENST00000418518 MCRIP2Q9BUT9 160 aaKnown RBP6.58□□□□□ -1.36
LINCMD1-201ENST00000418518 F8P00451 2351 aa6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 A0A087WX48 190 aa6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 H0Y8G0 127 aa6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 H7C1H1 209 aa6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 RHODO00212 210 aa6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 RS1O15537 224 aa6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 GIG44P09565 113 aaPredicted RBP6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 COX8AP10176 69 aa6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 INSL3P51460 131 aa6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 HNRNPA3P51991 378 aaKnown RBP6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 ZNF56Q15929 161 aa6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 SLC25A34Q6PIV7 304 aa6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 Q6ZN92 141 aa6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 C18orf15Q96N68 181 aa6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 LINC01587Q99440 93 aa6.57□□□□□ -1.36
LINCMD1-201ENST00000418518 F5H697 171 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 DLEU1O43261 78 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 DPM2O94777 84 aa6.56□□□□□ -1.36
LINCMD1-201ENST00000418518 PF4P02776 101 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms