RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 NIPBLQ6KC79 2804 aaeCLIP14.06□□□□□ -0.16
RAB3IP-205ENST00000417413 TSTD3H0UI37 97 aa14.05□□□□□ -0.16
RAB3IP-205ENST00000417413 SYT8Q8NBV8 401 aa14.05□□□□□ -0.16
RAB3IP-205ENST00000417413 INSP01308 110 aa14.04□□□□□ -0.16
RAB3IP-205ENST00000417413 HBDP02042 147 aa14.04□□□□□ -0.16
RAB3IP-205ENST00000417413 PRIMA1Q86XR5 153 aa14.04□□□□□ -0.16
RAB3IP-205ENST00000417413 TEP1Q99973 2627 aaKnown RBP14.04□□□□□ -0.16
RAB3IP-205ENST00000417413 KIR2DL5BA0A0G2JN68 375 aa14.04□□□□□ -0.16
RAB3IP-205ENST00000417413 KIR2DL5BA0A0G2JPC4 375 aa14.04□□□□□ -0.16
RAB3IP-205ENST00000417413 KIR2DL5AQ8N109 375 aa14.04□□□□□ -0.16
RAB3IP-205ENST00000417413 PRM2P04554 102 aa14.03□□□□□ -0.16
RAB3IP-205ENST00000417413 SMIM17P0DL12 118 aa14.03□□□□□ -0.16
RAB3IP-205ENST00000417413 C3orf56Q8N813 242 aa14.03□□□□□ -0.16
RAB3IP-205ENST00000417413 RPL39LQ96EH5 51 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-205ENST00000417413 MAP1LC3CQ9BXW4 147 aa14.03□□□□□ -0.16
RAB3IP-205ENST00000417413 A0A087WWL8 130 aa14.02□□□□□ -0.16
RAB3IP-205ENST00000417413 HTN1P15515 57 aa14.02□□□□□ -0.16
RAB3IP-205ENST00000417413 C12orf54Q6X4T0 127 aa14.02□□□□□ -0.16
RAB3IP-205ENST00000417413 LINC01587Q99440 93 aa14.02□□□□□ -0.16
RAB3IP-205ENST00000417413 C20orf78Q9BR46 151 aa14.02□□□□□ -0.16
RAB3IP-205ENST00000417413 VAMP8Q9BV40 100 aa14.02□□□□□ -0.16
RAB3IP-205ENST00000417413 XCL2Q9UBD3 114 aa14.02□□□□□ -0.16
RAB3IP-205ENST00000417413 CRYGDP07320 174 aa14.01□□□□□ -0.17
RAB3IP-205ENST00000417413 FCER1GP30273 86 aa14.01□□□□□ -0.17
RAB3IP-205ENST00000417413 PET117Q6UWS5 81 aa14.01□□□□□ -0.17
RAB3IP-205ENST00000417413 SMIM2Q9BVW6 85 aa14.01□□□□□ -0.17
RAB3IP-205ENST00000417413 SUMO2P61956 95 aaKnown RBP14.01□□□□□ -0.17
RAB3IP-205ENST00000417413 ZNF876PQ49A33 203 aa14.01□□□□□ -0.17
RAB3IP-205ENST00000417413 SUMO4Q6EEV6 95 aa14.01□□□□□ -0.17
RAB3IP-205ENST00000417413 SHISA2Q6UWI4 295 aa14.01□□□□□ -0.17
RAB3IP-205ENST00000417413 C1orf158Q8N1D5 194 aa14.01□□□□□ -0.17
RAB3IP-205ENST00000417413 WFDC10AQ9H1F0 79 aa14.01□□□□□ -0.17
RAB3IP-205ENST00000417413 PPP1R17O96001 155 aa14□□□□□ -0.17
RAB3IP-205ENST00000417413 DDTP30046 118 aa14□□□□□ -0.17
RAB3IP-205ENST00000417413 ZNF415Q09FC8 603 aa14□□□□□ -0.17
RAB3IP-205ENST00000417413 C11orf72Q8NBR9 251 aa14□□□□□ -0.17
RAB3IP-205ENST00000417413 SPATA3Q8NHX4 192 aa14□□□□□ -0.17
RAB3IP-205ENST00000417413 PAM16Q9Y3D7 125 aa14□□□□□ -0.17
RAB3IP-205ENST00000417413 ATOH7Q8N100 152 aa13.99□□□□□ -0.17
RAB3IP-205ENST00000417413 PTH2Q96A98 100 aa13.99□□□□□ -0.17
RAB3IP-205ENST00000417413 INSL3P51460 131 aa13.98□□□□□ -0.17
RAB3IP-205ENST00000417413 NUTF2P61970 127 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-205ENST00000417413 M0R2P5 195 aa13.97□□□□□ -0.17
RAB3IP-205ENST00000417413 TCAPO15273 167 aa13.97□□□□□ -0.17
RAB3IP-205ENST00000417413 GIG44P09565 113 aaPredicted RBP13.97□□□□□ -0.17
RAB3IP-205ENST00000417413 LAGE3Q14657 143 aa13.97□□□□□ -0.17
RAB3IP-205ENST00000417413 LINC01545Q5VT33 79 aa13.97□□□□□ -0.17
RAB3IP-205ENST00000417413 MCRIP2Q9BUT9 160 aaKnown RBP13.97□□□□□ -0.17
RAB3IP-205ENST00000417413 ATRQ13535 2644 aa13.97□□□□□ -0.17
RAB3IP-205ENST00000417413 C20orf202A1L168 122 aa13.97□□□□□ -0.17
RAB3IP-205ENST00000417413 F5H697 171 aa13.97□□□□□ -0.17
RAB3IP-205ENST00000417413 PIK3CD-AS1Q5SR53 167 aa13.97□□□□□ -0.17
RAB3IP-205ENST00000417413 FAM74A4Q5TZK3 123 aa13.97□□□□□ -0.17
RAB3IP-205ENST00000417413 RPL32P62910 135 aaKnown RBP13.96□□□□□ -0.17
RAB3IP-205ENST00000417413 IFI27L1Q96BM0 104 aa13.96□□□□□ -0.17
RAB3IP-205ENST00000417413 TRAV9-2A0A087WT02 112 aa13.95□□□□□ -0.18
RAB3IP-205ENST00000417413 AZU1P20160 251 aa13.95□□□□□ -0.18
RAB3IP-205ENST00000417413 MAJINQ3KP22 176 aa13.95□□□□□ -0.18
RAB3IP-205ENST00000417413 SPATA45Q537H7 98 aa13.95□□□□□ -0.18
RAB3IP-205ENST00000417413 SPXQ9BT56 116 aa13.95□□□□□ -0.18
RAB3IP-205ENST00000417413 NACAE9PAV3 2078 aa13.94□□□□□ -0.18
RAB3IP-205ENST00000417413 H0Y8G0 127 aa13.94□□□□□ -0.18
RAB3IP-205ENST00000417413 K7EMI3 77 aa13.94□□□□□ -0.18
RAB3IP-205ENST00000417413 M0QY20 66 aa13.94□□□□□ -0.18
RAB3IP-205ENST00000417413 C9orf66Q5T8R8 295 aa13.94□□□□□ -0.18
RAB3IP-205ENST00000417413 MORN3Q6PF18 240 aaPredicted RBP13.94□□□□□ -0.18
RAB3IP-205ENST00000417413 TMEM208Q9BTX3 173 aa13.94□□□□□ -0.18
RAB3IP-205ENST00000417413 ST20Q9HBF5 79 aa13.94□□□□□ -0.18
RAB3IP-205ENST00000417413 TRBV6-5A0A0K0K1A5 114 aa13.93□□□□□ -0.18
RAB3IP-205ENST00000417413 POLR2KP53803 58 aaKnown RBP13.93□□□□□ -0.18
RAB3IP-205ENST00000417413 ZNF56Q15929 161 aa13.93□□□□□ -0.18
RAB3IP-205ENST00000417413 UFSP1Q6NVU6 142 aa13.93□□□□□ -0.18
RAB3IP-205ENST00000417413 CSTL1Q9H114 145 aa13.93□□□□□ -0.18
RAB3IP-205ENST00000417413 RPL35AP18077 110 aaKnown RBP13.93□□□□□ -0.18
RAB3IP-205ENST00000417413 IL17DQ8TAD2 202 aa13.93□□□□□ -0.18
RAB3IP-205ENST00000417413 IGHV3OR16-12A0A075B7B8 117 aa13.92□□□□□ -0.18
RAB3IP-205ENST00000417413 ORMDL2Q53FV1 153 aa13.92□□□□□ -0.18
RAB3IP-205ENST00000417413 ZNF705AQ6ZN79 300 aaPredicted RBP13.92□□□□□ -0.18
RAB3IP-205ENST00000417413 C18orf15Q96N68 181 aa13.92□□□□□ -0.18
RAB3IP-205ENST00000417413 A8MWV9 139 aa13.91□□□□□ -0.18
RAB3IP-205ENST00000417413 LGALS9BQ3B8N2 356 aa13.91□□□□□ -0.18
RAB3IP-205ENST00000417413 LGALS9CQ6DKI2 356 aa13.91□□□□□ -0.18
RAB3IP-205ENST00000417413 PMCHL2Q9BQD1 86 aa13.91□□□□□ -0.18
RAB3IP-205ENST00000417413 NDUFAF3Q9BU61 184 aa13.91□□□□□ -0.18
RAB3IP-205ENST00000417413 EDA2RQ9HAV5 297 aa13.91□□□□□ -0.18
RAB3IP-205ENST00000417413 NUDT3O95989 172 aa13.9□□□□□ -0.18
RAB3IP-205ENST00000417413 CSNK1G2-AS1Q8NCQ2 148 aa13.9□□□□□ -0.18
RAB3IP-205ENST00000417413 RNASE8Q8TDE3 154 aaKnown RBP13.9□□□□□ -0.18
RAB3IP-205ENST00000417413 MIEN1Q9BRT3 115 aa13.9□□□□□ -0.18
RAB3IP-205ENST00000417413 IGLL1P15814 213 aa13.9□□□□□ -0.19
RAB3IP-205ENST00000417413 NEGR1Q7Z3B1 354 aa13.9□□□□□ -0.19
RAB3IP-205ENST00000417413 WFDC9Q8NEX5 89 aa13.9□□□□□ -0.19
RAB3IP-205ENST00000417413 MRPL16Q9NX20 251 aaKnown RBP13.9□□□□□ -0.19
RAB3IP-205ENST00000417413 VCYO14598 125 aa13.89□□□□□ -0.19
RAB3IP-205ENST00000417413 CFAP126Q5VTH2 177 aa13.89□□□□□ -0.19
RAB3IP-205ENST00000417413 C14orf144Q96I85 54 aa13.89□□□□□ -0.19
RAB3IP-205ENST00000417413 C1QTNF4Q9BXJ3 329 aa13.89□□□□□ -0.19
RAB3IP-205ENST00000417413 GOLT1BQ9Y3E0 138 aa13.89□□□□□ -0.19
RAB3IP-205ENST00000417413 TRBV27A0A0K0K1C4 114 aa13.88□□□□□ -0.19
RAB3IP-205ENST00000417413 SDHAF1A6NFY7 115 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms