RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ZNF674Q2M3X9 581 aa10.08□□□□□ -0.8
UBXN4-203ENST00000416538 FAM162BQ5T6X4 162 aa10.08□□□□□ -0.8
UBXN4-203ENST00000416538 CST9LP1Q5W188 147 aa10.08□□□□□ -0.8
UBXN4-203ENST00000416538 ZFP30Q9Y2G7 519 aa10.08□□□□□ -0.8
UBXN4-203ENST00000416538 SCO2A0A1W2PP80 73 aa10.07□□□□□ -0.8
UBXN4-203ENST00000416538 AKR1C3P42330 323 aa10.07□□□□□ -0.8
UBXN4-203ENST00000416538 UBE2G1P62253 170 aa10.07□□□□□ -0.8
UBXN4-203ENST00000416538 HAMPP81172 84 aa10.07□□□□□ -0.8
UBXN4-203ENST00000416538 FAM213BQ8TBF2 198 aa10.07□□□□□ -0.8
UBXN4-203ENST00000416538 A0A087WWL8 130 aa10.06□□□□□ -0.8
UBXN4-203ENST00000416538 RPL19P84098 196 aaKnown RBP10.06□□□□□ -0.8
UBXN4-203ENST00000416538 FAM74A4Q5TZK3 123 aa10.06□□□□□ -0.8
UBXN4-203ENST00000416538 STOML3Q8TAV4 291 aa10.06□□□□□ -0.8
UBXN4-203ENST00000416538 MBD3L1Q8WWY6 194 aa10.06□□□□□ -0.8
UBXN4-203ENST00000416538 A0A0D9SG52 128 aa10.05□□□□□ -0.8
UBXN4-203ENST00000416538 HMSDA8MTL9 139 aa10.05□□□□□ -0.8
UBXN4-203ENST00000416538 BCL2L11O43521 198 aa10.05□□□□□ -0.8
UBXN4-203ENST00000416538 SEC11BP0C7V7 166 aa10.05□□□□□ -0.8
UBXN4-203ENST00000416538 DNAJC30Q96LL9 226 aa10.05□□□□□ -0.8
UBXN4-203ENST00000416538 TCEAL7Q9BRU2 100 aa10.05□□□□□ -0.8
UBXN4-203ENST00000416538 DNAH8Q96JB1 4490 aa10.04□□□□□ -0.8
UBXN4-203ENST00000416538 KANTRA0A1W2PQU2 76 aa10.04□□□□□ -0.8
UBXN4-203ENST00000416538 M0R381 172 aa10.04□□□□□ -0.8
UBXN4-203ENST00000416538 DAZ4Q86SG3 579 aaKnown RBP10.04□□□□□ -0.8
UBXN4-203ENST00000416538 SFT2D1Q8WV19 159 aa10.04□□□□□ -0.8
UBXN4-203ENST00000416538 SFRP2Q96HF1 295 aa10.04□□□□□ -0.8
UBXN4-203ENST00000416538 ZNF471Q9BX82 626 aaPredicted RBP10.04□□□□□ -0.8
UBXN4-203ENST00000416538 DAZ3Q9NR90 486 aaKnown RBP10.04□□□□□ -0.8
UBXN4-203ENST00000416538 RHODO00212 210 aa10.03□□□□□ -0.8
UBXN4-203ENST00000416538 PSCAO43653 123 aa10.03□□□□□ -0.8
UBXN4-203ENST00000416538 LAGE3Q14657 143 aa10.03□□□□□ -0.8
UBXN4-203ENST00000416538 Q8N814 137 aa10.03□□□□□ -0.8
UBXN4-203ENST00000416538 SYT8Q8NBV8 401 aa10.03□□□□□ -0.8
UBXN4-203ENST00000416538 MLST8Q9BVC4 326 aa10.03□□□□□ -0.8
UBXN4-203ENST00000416538 PHLDA3Q9Y5J5 127 aa10.03□□□□□ -0.8
UBXN4-203ENST00000416538 VPS13BQ7Z7G8 4022 aa10.03□□□□□ -0.8
UBXN4-203ENST00000416538 FLG2Q5D862 2391 aaPredicted RBP10.02□□□□□ -0.8
UBXN4-203ENST00000416538 UMAD1C9J7I0 102 aa10.02□□□□□ -0.81
UBXN4-203ENST00000416538 TPT1P13693 172 aaKnown RBP10.02□□□□□ -0.81
UBXN4-203ENST00000416538 GCSHP23434 173 aa10.02□□□□□ -0.81
UBXN4-203ENST00000416538 EIF5AP63241 154 aaKnown RBP10.02□□□□□ -0.81
UBXN4-203ENST00000416538 OR10AG1Q8NH19 301 aa10.02□□□□□ -0.81
UBXN4-203ENST00000416538 IGLV5-52A0A0A0MRZ9 124 aa10.01□□□□□ -0.81
UBXN4-203ENST00000416538 EPM2AB3EWF7 344 aa10.01□□□□□ -0.81
UBXN4-203ENST00000416538 XP32Q5T750 250 aa10.01□□□□□ -0.81
UBXN4-203ENST00000416538 ZFP82Q8N141 532 aa10.01□□□□□ -0.81
UBXN4-203ENST00000416538 DERL1Q9BUN8 251 aa10.01□□□□□ -0.81
UBXN4-203ENST00000416538 PFDN1O60925 122 aa10□□□□□ -0.81
UBXN4-203ENST00000416538 CCL20P78556 96 aa10□□□□□ -0.81
UBXN4-203ENST00000416538 Q5VSD8 79 aa10□□□□□ -0.81
UBXN4-203ENST00000416538 TMUB2Q71RG4 321 aa10□□□□□ -0.81
UBXN4-203ENST00000416538 FAM30AQ9NZY2 134 aa10□□□□□ -0.81
UBXN4-203ENST00000416538 MUC21A0A0G2JKD1 596 aa9.99□□□□□ -0.81
UBXN4-203ENST00000416538 MUC21A0A140T8X8 626 aa9.99□□□□□ -0.81
UBXN4-203ENST00000416538 LECT2O14960 151 aa9.99□□□□□ -0.81
UBXN4-203ENST00000416538 SMR3BP02814 79 aaPredicted RBP9.99□□□□□ -0.81
UBXN4-203ENST00000416538 UBE2D3P61077 147 aa9.99□□□□□ -0.81
UBXN4-203ENST00000416538 UBE2D2P62837 147 aa9.99□□□□□ -0.81
UBXN4-203ENST00000416538 NIT1Q86X76 327 aa9.99□□□□□ -0.81
UBXN4-203ENST00000416538 NTN5Q8WTR8 489 aaPredicted RBP9.99□□□□□ -0.81
UBXN4-203ENST00000416538 SNAI2O43623 268 aa9.98□□□□□ -0.81
UBXN4-203ENST00000416538 CXCL1P09341 107 aa9.98□□□□□ -0.81
UBXN4-203ENST00000416538 H2AFB1P0C5Y9 115 aa9.98□□□□□ -0.81
UBXN4-203ENST00000416538 BAGE2Q86Y30 109 aa9.98□□□□□ -0.81
UBXN4-203ENST00000416538 C11orf52Q96A22 123 aa9.98□□□□□ -0.81
UBXN4-203ENST00000416538 A0A087WWC5 75 aa9.97□□□□□ -0.81
UBXN4-203ENST00000416538 RPL35P42766 123 aaKnown RBP9.97□□□□□ -0.81
UBXN4-203ENST00000416538 PRR27Q6MZM9 219 aa9.97□□□□□ -0.81
UBXN4-203ENST00000416538 NEXN-AS1Q8NBZ9 246 aa9.97□□□□□ -0.81
UBXN4-203ENST00000416538 SSBP4Q9BWG4 385 aaPredicted RBP9.97□□□□□ -0.81
UBXN4-203ENST00000416538 TRBV10-1A0A0K0K1A3 114 aa9.96□□□□□ -0.82
UBXN4-203ENST00000416538 IGLV2-8P01709 118 aa9.96□□□□□ -0.82
UBXN4-203ENST00000416538 OR10G8Q8NGN5 311 aa9.96□□□□□ -0.82
UBXN4-203ENST00000416538 TMEM70Q9BUB7 260 aa9.96□□□□□ -0.82
UBXN4-203ENST00000416538 GNG13Q9P2W3 67 aa9.96□□□□□ -0.82
UBXN4-203ENST00000416538 TRBV7-3A0A075B6L6 115 aa9.95□□□□□ -0.82
UBXN4-203ENST00000416538 TRAV8-3A0A0A6YYJ7 113 aa9.95□□□□□ -0.82
UBXN4-203ENST00000416538 S100A9P06702 114 aaKnown RBP9.95□□□□□ -0.82
UBXN4-203ENST00000416538 EIF5AL1Q6IS14 154 aaKnown RBP9.95□□□□□ -0.82
UBXN4-203ENST00000416538 KLK12Q9UKR0 248 aa9.95□□□□□ -0.82
UBXN4-203ENST00000416538 KIF25-AS1Q9Y6Z4 181 aa9.95□□□□□ -0.82
UBXN4-203ENST00000416538 DMBT1Q9UGM3 2413 aaPredicted RBP9.95□□□□□ -0.82
UBXN4-203ENST00000416538 MYCBP2O75592 4640 aa9.94□□□□□ -0.82
UBXN4-203ENST00000416538 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.94□□□□□ -0.82
UBXN4-203ENST00000416538 TRAV1-1A0A0B4J248 108 aa9.94□□□□□ -0.82
UBXN4-203ENST00000416538 OR5AL1P0C617 328 aa9.94□□□□□ -0.82
UBXN4-203ENST00000416538 GZMBP10144 247 aa9.94□□□□□ -0.82
UBXN4-203ENST00000416538 RPL36AP83881 106 aaKnown RBP9.94□□□□□ -0.82
UBXN4-203ENST00000416538 ZNF56Q15929 161 aa9.94□□□□□ -0.82
UBXN4-203ENST00000416538 LINC01620Q4KN68 170 aa9.94□□□□□ -0.82
UBXN4-203ENST00000416538 CENPWQ5EE01 88 aa9.94□□□□□ -0.82
UBXN4-203ENST00000416538 Q6ZSA8 131 aa9.94□□□□□ -0.82
UBXN4-203ENST00000416538 BAALCQ8WXS3 180 aa9.94□□□□□ -0.82
UBXN4-203ENST00000416538 RPL36ALQ969Q0 106 aaKnown RBP9.94□□□□□ -0.82
UBXN4-203ENST00000416538 TM2D2Q9BX73 214 aa9.94□□□□□ -0.82
UBXN4-203ENST00000416538 TRBV20OR9-2A0A075B6H5 130 aa9.93□□□□□ -0.82
UBXN4-203ENST00000416538 RBFOX3A6NFN3 312 aa9.93□□□□□ -0.82
UBXN4-203ENST00000416538 INAFM2P0DMQ5 153 aa9.93□□□□□ -0.82
UBXN4-203ENST00000416538 RAB5CP51148 216 aa9.93□□□□□ -0.82
UBXN4-203ENST00000416538 RAB4BP61018 213 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms