RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 SIGMAR1Q99720 223 aa6.81□□□□□ -1.32
CHRNA1-206ENST00000416004 SPAG8Q99932 426 aaPredicted RBP6.81□□□□□ -1.32
CHRNA1-206ENST00000416004 C19orf73Q9NVV2 129 aa6.81□□□□□ -1.32
CHRNA1-206ENST00000416004 A0A0J9YX75 114 aa6.8□□□□□ -1.32
CHRNA1-206ENST00000416004 TMEM189A5PLL7 270 aa6.8□□□□□ -1.32
CHRNA1-206ENST00000416004 SH2D1AO60880 128 aa6.8□□□□□ -1.32
CHRNA1-206ENST00000416004 KIR3DS1Q14943 382 aa6.8□□□□□ -1.32
CHRNA1-206ENST00000416004 ZFAND2AQ8N6M9 145 aa6.8□□□□□ -1.32
CHRNA1-206ENST00000416004 CHCHD1Q96BP2 118 aaKnown RBP6.8□□□□□ -1.32
CHRNA1-206ENST00000416004 FAM19A4Q96LR4 140 aa6.8□□□□□ -1.32
CHRNA1-206ENST00000416004 LINC00477Q96M19 166 aa6.8□□□□□ -1.32
CHRNA1-206ENST00000416004 MAP6D1Q9H9H5 199 aa6.8□□□□□ -1.32
CHRNA1-206ENST00000416004 KNCNA6PVL3 124 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 C3orf84H3BNL1 204 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 IGKV3-20P01619 116 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 ODF3L2Q3SX64 289 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 NDFIP1Q9BT67 221 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 FAM231BA6NCW3 169 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 SYS1-DBNDD2H3BUS1 97 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 J3KRW8 73 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 J3QR89 54 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 P01737 135 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 CD7P09564 240 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 TCL1AP56279 114 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 ATP5L2Q7Z4Y8 100 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 ZNF575Q86XF7 245 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 APRG1Q8IVJ8 170 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 TM2D3Q9BRN9 247 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 RPP21Q9H633 154 aaKnown RBP6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 C11orf21Q9P2W6 132 aa6.79□□□□□ -1.32
CHRNA1-206ENST00000416004 LOC102724200A0A096LPH7 203 aaPredicted RBP6.78□□□□□ -1.32
CHRNA1-206ENST00000416004 KIAA1644Q3SXP7 199 aa6.78□□□□□ -1.32
CHRNA1-206ENST00000416004 FOXI2Q6ZQN5 318 aa6.78□□□□□ -1.32
CHRNA1-206ENST00000416004 FA2HQ7L5A8 372 aa6.78□□□□□ -1.32
CHRNA1-206ENST00000416004 IL17DQ8TAD2 202 aa6.78□□□□□ -1.32
CHRNA1-206ENST00000416004 DAZAP1Q96EP5 407 aaKnown RBP6.78□□□□□ -1.32
CHRNA1-206ENST00000416004 LENEPQ9Y5L5 61 aa6.78□□□□□ -1.32
CHRNA1-206ENST00000416004 RBMY1BA6NDE4 496 aaKnown RBP6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 RBMY1EA6NEQ0 496 aaKnown RBP6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 RBMY1DP0C7P1 496 aaKnown RBP6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 COX8AP10176 69 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 AZU1P20160 251 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 APOC4P55056 127 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 AMTNQ6UX39 209 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 MUC7Q8TAX7 377 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 GTSF1Q8WW33 167 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 COL7A1Q02388 2944 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 TMSB15BA0A087X1C1 80 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 H3BMM0 161 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 HSD52Q0P140 79 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 TMEM97Q5BJF2 176 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 ERASQ7Z444 233 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 OR10AG1Q8NH19 301 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 WFDC10AQ9H1F0 79 aa6.77□□□□□ -1.33
CHRNA1-206ENST00000416004 A8MTW9 85 aa6.76□□□□□ -1.33
CHRNA1-206ENST00000416004 FABP5P3A8MUU1 101 aa6.76□□□□□ -1.33
CHRNA1-206ENST00000416004 KLLNB2CW77 178 aa6.76□□□□□ -1.33
CHRNA1-206ENST00000416004 SPINK4O60575 86 aa6.76□□□□□ -1.33
CHRNA1-206ENST00000416004 HLA-DRB4P13762 266 aa6.76□□□□□ -1.33
CHRNA1-206ENST00000416004 RNASE4P34096 147 aaKnown RBP6.76□□□□□ -1.33
CHRNA1-206ENST00000416004 SLAQ13239 276 aa6.76□□□□□ -1.33
CHRNA1-206ENST00000416004 CT83Q5H943 113 aa6.76□□□□□ -1.33
CHRNA1-206ENST00000416004 RNASEKQ6P5S7 137 aaKnown RBP6.76□□□□□ -1.33
CHRNA1-206ENST00000416004 HLA-DRB4X5D2U9 266 aa6.76□□□□□ -1.33
CHRNA1-206ENST00000416004 IGKV3D-20A0A0C4DH25 116 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 TRBV7-9A0A0J9YWB2 115 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 HIGD1CA8MV81 97 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 SIVA1O15304 175 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 SPINK13Q1W4C9 94 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 SPATA12Q7Z6I5 190 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 NUP35Q8NFH5 326 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 ODF3Q96PU9 254 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 FAM110AQ9BQ89 295 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 MAP1LC3CQ9BXW4 147 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 HSPB8Q9UJY1 196 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 TRAV12-2A0A075B6T6 113 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 A8MWL6 223 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 DUSP14O95147 198 aaKnown RBP6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 LEPROTL1O95214 131 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 ORM1P02763 201 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 FXYD7P58549 80 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 C2orf91Q6ZV80 131 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 MRAP2Q96G30 205 aa6.75□□□□□ -1.33
CHRNA1-206ENST00000416004 AGRNO00468 2067 aa6.74□□□□□ -1.33
CHRNA1-206ENST00000416004 A0A1W2PPM0 123 aa6.74□□□□□ -1.33
CHRNA1-206ENST00000416004 hDV102S1A0JD36 115 aa6.74□□□□□ -1.33
CHRNA1-206ENST00000416004 CKS1BP61024 79 aa6.74□□□□□ -1.33
CHRNA1-206ENST00000416004 LINC01559Q495D7 138 aa6.74□□□□□ -1.33
CHRNA1-206ENST00000416004 LINC01545Q5VT33 79 aa6.74□□□□□ -1.33
CHRNA1-206ENST00000416004 PGLYRP4Q96LB8 373 aa6.74□□□□□ -1.33
CHRNA1-206ENST00000416004 TRAV12-3A0A0B4J271 114 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 IGHV1-24A0A0C4DH33 117 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 FABP2P12104 132 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 LEPP41159 167 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 Q6AWC8 147 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 GFRA4Q9GZZ7 299 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 SPCS1Q9Y6A9 102 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 TRAV21A0A0B4J279 112 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 A0A1B0GXF2 115 aa6.73□□□□□ -1.33
CHRNA1-206ENST00000416004 GAGE12HA6NDE8 117 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms