RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 PMVKQ15126 192 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 TMEM241Q24JQ0 296 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 ACOT6Q3I5F7 207 aaPredicted RBP4.12□□□□□ -1.75
EPHA4-204ENST00000415749 RPL39P5Q59GN2 51 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 CLEC19AQ6UXS0 136 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 HIST3H2BBQ8N257 126 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 LEAP2Q969E1 77 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 MGST2Q99735 147 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 GGTLC1Q9BX51 225 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 TMEM14BQ9NUH8 114 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 IDI2-AS1Q9NZ38 188 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 ZNF729A6NN14 1252 aaPredicted RBP4.11□□□□□ -1.75
EPHA4-204ENST00000415749 C17orf112F2Z3M2 114 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 INS-IGF2F8WCM5 200 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 HMGB3O15347 200 aaKnown RBP4.11□□□□□ -1.75
EPHA4-204ENST00000415749 FABP1P07148 127 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 LINC00869P0C866 280 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 DEFA4P12838 97 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 REG1BP48304 166 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 NDUFA6P56556 154 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 ERCC8Q13216 396 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 SPINK9Q5DT21 86 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 PYY3Q5JQD4 70 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 TMEM144Q7Z5S9 345 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 DEFB125Q8N687 156 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 OR10X1Q8NGY0 326 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 OR4X1Q8NH49 305 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 KCNS1Q96KK3 526 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 SMIM7Q9BQ49 75 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 TXNDC17Q9BRA2 123 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 KCNIP2Q9NS61 270 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 PRO0628Q9UI54 55 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 DNAH11Q96DT5 4516 aa4.11□□□□□ -1.75
EPHA4-204ENST00000415749 TRAV41A0A0B4J266 112 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 IZUMO1RA6ND01 250 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 ZNF705GA8MUZ8 300 aaPredicted RBP4.1□□□□□ -1.75
EPHA4-204ENST00000415749 OR11H12B2RN74 326 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 F6UZH7 168 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 UPK2O00526 184 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 PDE6DO43924 150 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 HRASP01112 189 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 IGHV3-11P01762 117 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 C8orf88P0DMB2 117 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 S100PP25815 95 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 GNG10P50151 68 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 HSPE1P61604 102 aaKnown RBP4.1□□□□□ -1.75
EPHA4-204ENST00000415749 ADIRFQ15847 76 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 LTC4SQ16873 150 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 C4orf26Q17RF5 130 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 MIC13Q5XKP0 118 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 ZNF833PQ6ZTB9 187 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 LINC01551Q86U37 167 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 FMC1Q96HJ9 113 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 IMMP2LQ96T52 175 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 NIT2Q9NQR4 276 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 PXMP4Q9Y6I8 212 aa4.1□□□□□ -1.75
EPHA4-204ENST00000415749 TRBV20OR9-2A0A075B6H5 130 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 C11orf94C9JXX5 98 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 CXorf1O96002 111 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 CA2P00918 260 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 CD7P09564 240 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 LGALS7P47929 136 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 ATP5G3P48201 142 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 UBE2AP49459 152 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 PRCDQ00LT1 54 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 C2orf83Q53S99 150 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 LINC00311Q8N616 119 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 ZNF709Q8N972 641 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 HIST1H2BLQ99880 126 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 DERL1Q9BUN8 251 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 CHAC1Q9BUX1 264 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 NPVFQ9HCQ7 196 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 BET1LQ9NYM9 111 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 TP53TG1Q9Y2A0 90 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 YTHDF2Q9Y5A9 579 aaKnown RBP4.09□□□□□ -1.75
EPHA4-204ENST00000415749 LY96Q9Y6Y9 160 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 ARL2-SNX15V9GYD0 113 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 DNAH17Q9UFH2 4485 aa4.09□□□□□ -1.75
EPHA4-204ENST00000415749 HERC1Q15751 4861 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 TRAV9-1A0A075B6T8 112 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 IGKV1OR2-108A0A075B7D4 117 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 TEX50A0A1B0GTY4 177 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 A0A1B0GXF2 115 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 C9JCJ5 164 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 H7BYZ3 331 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 IFNA10P01566 189 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 OR5G3P0C626 314 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 ARL14EPLP0DKL9 152 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 RNASE2P10153 161 aaKnown RBP4.08□□□□□ -1.76
EPHA4-204ENST00000415749 HIST1H1BP16401 226 aaKnown RBP4.08□□□□□ -1.76
EPHA4-204ENST00000415749 NPY1RP25929 384 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 GCHFRP30047 84 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 ZNF137PP52743 207 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 YPEL3P61236 119 aaPredicted RBP4.08□□□□□ -1.76
EPHA4-204ENST00000415749 DAZ2Q13117 558 aaKnown RBP4.08□□□□□ -1.76
EPHA4-204ENST00000415749 SPATA31B1PQ5VZV4 182 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 FAM19A5Q7Z5A7 132 aaPredicted RBP4.08□□□□□ -1.76
EPHA4-204ENST00000415749 OR10D4PQ8NGN7 298 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 OR1L8Q8NGR8 309 aa4.08□□□□□ -1.76
EPHA4-204ENST00000415749 OR1P1Q8NH06 330 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms