RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 DEFB131BA0A096LNP1 70 aa4.81□□□□□ -1.64
LINC00343-201ENST00000414368 RNASE3P12724 160 aaKnown RBP4.81□□□□□ -1.64
LINC00343-201ENST00000414368 PEA15Q15121 130 aa4.81□□□□□ -1.64
LINC00343-201ENST00000414368 CLLU1Q5K131 121 aa4.81□□□□□ -1.64
LINC00343-201ENST00000414368 IBA57Q5T440 356 aaKnown RBP4.81□□□□□ -1.64
LINC00343-201ENST00000414368 LINC00612Q8N6U2 182 aa4.81□□□□□ -1.64
LINC00343-201ENST00000414368 SMIM7Q9BQ49 75 aa4.81□□□□□ -1.64
LINC00343-201ENST00000414368 TRGV2A0A075B6R0 118 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 TRAV10A0A0B4J240 114 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 TEX48A0A1B0GUV7 120 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 NUPR2A6NF83 97 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 ZNF727A8MUV8 499 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 IGLL5B9A064 214 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 C9JCJ5 164 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 H3BVH4 76 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 M0R2P5 195 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 IGHV3-53P01767 116 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 ARMS2P0C7Q2 107 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 GZMBP10144 247 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 S100A4P26447 101 aaKnown RBP4.8□□□□□ -1.64
LINC00343-201ENST00000414368 LGALS9BQ3B8N2 356 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 C9orf85Q96MD7 179 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 SPXQ9BT56 116 aa4.8□□□□□ -1.64
LINC00343-201ENST00000414368 RNASE7Q9H1E1 156 aaKnown RBP4.8□□□□□ -1.64
LINC00343-201ENST00000414368 DNAH1Q9P2D7 4330 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 MUC21A0A0G2JKD1 596 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 MUC21A0A140T8X8 626 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 C19orf71A6NCJ1 209 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 PRSS47A8MTI9 375 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 F5H768 121 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 NDUFS6O75380 124 aaKnown RBP4.79□□□□□ -1.64
LINC00343-201ENST00000414368 ATP5G1P05496 136 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 IGKV2-30P06310 120 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 SFTA3P0C7M3 94 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 ASIPP42127 132 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 AMTP48728 403 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 SSTP61278 116 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 ZNF876PQ49A33 203 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 CFAP161Q6P656 301 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 POM121L12Q8N7R1 296 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 OR2D3Q8NGH3 330 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 RASL10AQ92737 203 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 SMIM12Q96EX1 92 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 KLK5Q9Y337 293 aaPredicted RBP4.79□□□□□ -1.64
LINC00343-201ENST00000414368 VPS13DQ5THJ4 4388 aa4.79□□□□□ -1.64
LINC00343-201ENST00000414368 KMT2CQ8NEZ4 4911 aaKnown RBP4.78□□□□□ -1.64
LINC00343-201ENST00000414368 IGHV4-4A0A075B6R2 117 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 P01737 135 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 TMEM241Q24JQ0 296 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 SOHLH1Q5JUK2 328 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 DNLZQ5SXM8 178 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 LINC01551Q86U37 167 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 ZNF479Q96JC4 524 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 SMDT1Q9H4I9 107 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 JPT2Q9H910 190 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 SCRT2Q9NQ03 307 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 BIN3Q9NQY0 253 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 IL36BQ9NZH7 164 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 APLNQ9ULZ1 77 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 SACSQ9NZJ4 4579 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 LYSTQ99698 3801 aa4.78□□□□□ -1.64
LINC00343-201ENST00000414368 TRAV26-1A0A087WT03 109 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 IGHV3-73A0A0B4J1V6 119 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 A0A0J9YY99 117 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 M0R381 172 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 VCYO14598 125 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 PRSS2P07478 247 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 ERVFC1-1P60608 527 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 RPL23P62829 140 aaKnown RBP4.77□□□□□ -1.65
LINC00343-201ENST00000414368 ADIRFQ15847 76 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 FAM74A3Q4VXF1 159 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 CFAP126Q5VTH2 177 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 PRR26Q8N8Z3 221 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 OR4C5Q8NGB2 326 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 OR10AG1Q8NH19 301 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 C18orf15Q96N68 181 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 TPPP3Q9BW30 176 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 SAMD10Q9BYL1 202 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 NAT8Q9UHE5 227 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 PHLDA3Q9Y5J5 127 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 LY96Q9Y6Y9 160 aa4.77□□□□□ -1.65
LINC00343-201ENST00000414368 TRAV4A0A0B4J268 109 aa4.76□□□□□ -1.65
LINC00343-201ENST00000414368 TRGV4A0A0C4DH28 118 aa4.76□□□□□ -1.65
LINC00343-201ENST00000414368 RS1O15537 224 aa4.76□□□□□ -1.65
LINC00343-201ENST00000414368 GATCO43716 136 aaKnown RBP4.76□□□□□ -1.65
LINC00343-201ENST00000414368 CXCL1P09341 107 aa4.76□□□□□ -1.65
LINC00343-201ENST00000414368 IGLC6P0CF74 106 aa4.76□□□□□ -1.65
LINC00343-201ENST00000414368 COMMD7Q86VX2 200 aa4.76□□□□□ -1.65
LINC00343-201ENST00000414368 FER1L6-AS1Q8NA97 138 aa4.76□□□□□ -1.65
LINC00343-201ENST00000414368 PTH2Q96A98 100 aa4.76□□□□□ -1.65
LINC00343-201ENST00000414368 ISOC2Q96AB3 205 aa4.76□□□□□ -1.65
LINC00343-201ENST00000414368 VSIG2Q96IQ7 327 aa4.76□□□□□ -1.65
LINC00343-201ENST00000414368 NDUFAF3Q9BU61 184 aa4.76□□□□□ -1.65
LINC00343-201ENST00000414368 RPP21Q9H633 154 aaKnown RBP4.76□□□□□ -1.65
LINC00343-201ENST00000414368 ALMS1Q8TCU4 4167 aa4.76□□□□□ -1.65
LINC00343-201ENST00000414368 hDV102S1A0JD36 115 aa4.75□□□□□ -1.65
LINC00343-201ENST00000414368 XKRY2A2RUG3 117 aa4.75□□□□□ -1.65
LINC00343-201ENST00000414368 LINC00862A6NCI5 91 aa4.75□□□□□ -1.65
LINC00343-201ENST00000414368 SNAI2O43623 268 aa4.75□□□□□ -1.65
LINC00343-201ENST00000414368 OR5AL1P0C617 328 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms