RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CD7P09564 240 aa10.94□□□□□ -0.66
SEMA3F-202ENST00000413852 SPINK8P0C7L1 97 aa10.94□□□□□ -0.66
SEMA3F-202ENST00000413852 CFC1BP0CG36 223 aa10.94□□□□□ -0.66
SEMA3F-202ENST00000413852 CFC1P0CG37 223 aa10.94□□□□□ -0.66
SEMA3F-202ENST00000413852 TRPT1Q86TN4 253 aaKnown RBP10.94□□□□□ -0.66
SEMA3F-202ENST00000413852 SUMO4Q6EEV6 95 aa10.94□□□□□ -0.66
SEMA3F-202ENST00000413852 UBE2D1P51668 147 aa10.94□□□□□ -0.66
SEMA3F-202ENST00000413852 BLCAPP62952 87 aa10.94□□□□□ -0.66
SEMA3F-202ENST00000413852 NDUFA11Q86Y39 141 aa10.94□□□□□ -0.66
SEMA3F-202ENST00000413852 EIF4EBP3O60516 100 aaPredicted RBP10.93□□□□□ -0.66
SEMA3F-202ENST00000413852 SCGB1C2P0DMR2 95 aa10.93□□□□□ -0.66
SEMA3F-202ENST00000413852 LINC00315P59091 139 aa10.93□□□□□ -0.66
SEMA3F-202ENST00000413852 TMEM95Q3KNT9 176 aa10.93□□□□□ -0.66
SEMA3F-202ENST00000413852 PSMG4Q5JS54 123 aa10.93□□□□□ -0.66
SEMA3F-202ENST00000413852 PF4V1P10720 104 aa10.93□□□□□ -0.66
SEMA3F-202ENST00000413852 K7ENP7 123 aa10.92□□□□□ -0.66
SEMA3F-202ENST00000413852 PRM2P04554 102 aa10.92□□□□□ -0.66
SEMA3F-202ENST00000413852 C9orf139Q6ZV77 190 aa10.92□□□□□ -0.66
SEMA3F-202ENST00000413852 OOSP1A8MZH6 123 aa10.92□□□□□ -0.66
SEMA3F-202ENST00000413852 SOCS3O14543 225 aa10.92□□□□□ -0.66
SEMA3F-202ENST00000413852 ELANEP08246 267 aa10.92□□□□□ -0.66
SEMA3F-202ENST00000413852 CENPEQ02224 2701 aa10.92□□□□□ -0.66
SEMA3F-202ENST00000413852 A0A1B0GV72 72 aa10.92□□□□□ -0.66
SEMA3F-202ENST00000413852 LMO4P61968 165 aa10.92□□□□□ -0.66
SEMA3F-202ENST00000413852 RNASE13Q5GAN3 156 aaKnown RBP10.92□□□□□ -0.66
SEMA3F-202ENST00000413852 BEX4Q9NWD9 120 aaPredicted RBP10.92□□□□□ -0.66
SEMA3F-202ENST00000413852 RHPN1-AS1Q9BWJ2 59 aa10.91□□□□□ -0.66
SEMA3F-202ENST00000413852 MDFICQ9P1T7 246 aa10.91□□□□□ -0.66
SEMA3F-202ENST00000413852 KLK9Q9UKQ9 250 aa10.91□□□□□ -0.66
SEMA3F-202ENST00000413852 ITPR1Q14643 2758 aa10.91□□□□□ -0.66
SEMA3F-202ENST00000413852 IGIPA6NJ69 53 aa10.91□□□□□ -0.66
SEMA3F-202ENST00000413852 C1orf122Q6ZSJ8 110 aa10.91□□□□□ -0.66
SEMA3F-202ENST00000413852 GEMIN7Q9H840 131 aaKnown RBP10.91□□□□□ -0.66
SEMA3F-202ENST00000413852 IGHV3-73A0A0B4J1V6 119 aa10.9□□□□□ -0.66
SEMA3F-202ENST00000413852 SDHAF1A6NFY7 115 aa10.9□□□□□ -0.66
SEMA3F-202ENST00000413852 HTN1P15515 57 aa10.9□□□□□ -0.66
SEMA3F-202ENST00000413852 C10orf99Q6UWK7 81 aa10.9□□□□□ -0.66
SEMA3F-202ENST00000413852 KIF25-AS1Q9Y6Z4 181 aa10.9□□□□□ -0.66
SEMA3F-202ENST00000413852 TRAV2A0A0B4J234 112 aa10.9□□□□□ -0.66
SEMA3F-202ENST00000413852 MRPL53Q96EL3 112 aaKnown RBP10.9□□□□□ -0.66
SEMA3F-202ENST00000413852 IGHV3-30P01768 117 aa10.9□□□□□ -0.67
SEMA3F-202ENST00000413852 IGHV3-30-5P0DP03 117 aa10.9□□□□□ -0.67
SEMA3F-202ENST00000413852 NPC2P61916 151 aa10.9□□□□□ -0.67
SEMA3F-202ENST00000413852 ANKRD29Q8N6D5 301 aa10.9□□□□□ -0.67
SEMA3F-202ENST00000413852 IGHV4-38-2P0DP08 117 aa10.89□□□□□ -0.67
SEMA3F-202ENST00000413852 CRYBA4P53673 196 aa10.89□□□□□ -0.67
SEMA3F-202ENST00000413852 Q6ZUT4 128 aa10.89□□□□□ -0.67
SEMA3F-202ENST00000413852 UBE2D3P61077 147 aa10.88□□□□□ -0.67
SEMA3F-202ENST00000413852 UBE2D2P62837 147 aa10.88□□□□□ -0.67
SEMA3F-202ENST00000413852 CEMP1Q6PRD7 247 aaPredicted RBP10.88□□□□□ -0.67
SEMA3F-202ENST00000413852 Q6ZSV7 163 aa10.88□□□□□ -0.67
SEMA3F-202ENST00000413852 A4D1N5 150 aa10.88□□□□□ -0.67
SEMA3F-202ENST00000413852 ZNF688P0C7X2 276 aa10.88□□□□□ -0.67
SEMA3F-202ENST00000413852 PMVKQ15126 192 aa10.88□□□□□ -0.67
SEMA3F-202ENST00000413852 FBXL19-AS1Q494R0 122 aa10.88□□□□□ -0.67
SEMA3F-202ENST00000413852 TMEM238LA0A1B0GVL6 79 aa10.88□□□□□ -0.67
SEMA3F-202ENST00000413852 A6NJY4 79 aa10.88□□□□□ -0.67
SEMA3F-202ENST00000413852 SCGB1A1P11684 91 aa10.88□□□□□ -0.67
SEMA3F-202ENST00000413852 POLQO75417 2590 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 A8MZ25 164 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 P0DMU3 169 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 FAM231AP0DMU4 169 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 FAM231CP0DMU5 169 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 ZNF56Q15929 161 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 FAM159AQ6UWV7 190 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 AMELXQ99217 191 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 Q9UF83 564 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 NACAE9PAV3 2078 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 C9JAW5 83 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 OVOL1O14753 267 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 RNF183Q96D59 192 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 DUX5Q96PT3 197 aa10.87□□□□□ -0.67
SEMA3F-202ENST00000413852 J3QQQ9 107 aa10.86□□□□□ -0.67
SEMA3F-202ENST00000413852 POLR2KP53803 58 aaKnown RBP10.86□□□□□ -0.67
SEMA3F-202ENST00000413852 IGHV4-39P01824 125 aa10.86□□□□□ -0.67
SEMA3F-202ENST00000413852 PROK1P58294 105 aa10.86□□□□□ -0.67
SEMA3F-202ENST00000413852 MOB4Q9Y3A3 225 aa10.86□□□□□ -0.67
SEMA3F-202ENST00000413852 A0A0J9YXV3 536 aa10.86□□□□□ -0.67
SEMA3F-202ENST00000413852 H3BUX3 64 aa10.86□□□□□ -0.67
SEMA3F-202ENST00000413852 C19orf84I3L1E1 186 aa10.86□□□□□ -0.67
SEMA3F-202ENST00000413852 HIST2H2BDQ6DRA6 164 aa10.86□□□□□ -0.67
SEMA3F-202ENST00000413852 NOTCH3Q9UM47 2321 aa10.86□□□□□ -0.67
SEMA3F-202ENST00000413852 FLNCQ14315 2725 aa10.85□□□□□ -0.67
SEMA3F-202ENST00000413852 LINC01619G3V211 115 aa10.85□□□□□ -0.67
SEMA3F-202ENST00000413852 FAM19A4Q96LR4 140 aa10.85□□□□□ -0.67
SEMA3F-202ENST00000413852 USP9YO00507 2555 aaPredicted RBP10.85□□□□□ -0.67
SEMA3F-202ENST00000413852 MUSTN1Q8IVN3 82 aa10.85□□□□□ -0.67
SEMA3F-202ENST00000413852 LGALS3P17931 250 aaKnown RBP10.84□□□□□ -0.67
SEMA3F-202ENST00000413852 SLC25A29Q8N8R3 303 aa10.84□□□□□ -0.67
SEMA3F-202ENST00000413852 HERVK_113P61574 105 aa10.84□□□□□ -0.67
SEMA3F-202ENST00000413852 SPINK13Q1W4C9 94 aa10.84□□□□□ -0.67
SEMA3F-202ENST00000413852 C19orf54Q5BKX5 351 aa10.84□□□□□ -0.67
SEMA3F-202ENST00000413852 TEN1Q86WV5 123 aa10.84□□□□□ -0.67
SEMA3F-202ENST00000413852 C10orf126Q8N4M7 172 aa10.84□□□□□ -0.67
SEMA3F-202ENST00000413852 A8MWV9 139 aa10.84□□□□□ -0.67
SEMA3F-202ENST00000413852 LY6DQ14210 128 aa10.84□□□□□ -0.67
SEMA3F-202ENST00000413852 PRO1854Q9UHT4 67 aa10.84□□□□□ -0.67
SEMA3F-202ENST00000413852 TRAV8-3A0A0A6YYJ7 113 aa10.83□□□□□ -0.68
SEMA3F-202ENST00000413852 NDUFA4O00483 81 aa10.83□□□□□ -0.68
SEMA3F-202ENST00000413852 Q1RN00 199 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms