RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 CRYGDP07320 174 aa12.59□□□□□ -0.39
ITGA6-204ENST00000412899 GATA1P15976 413 aaPredicted RBP12.59□□□□□ -0.39
ITGA6-204ENST00000412899 BLOC1S1P78537 153 aa12.59□□□□□ -0.39
ITGA6-204ENST00000412899 PRR27Q6MZM9 219 aa12.59□□□□□ -0.39
ITGA6-204ENST00000412899 C10orf126Q8N4M7 172 aa12.59□□□□□ -0.39
ITGA6-204ENST00000412899 TAGLN2P37802 199 aaKnown RBP12.58□□□□□ -0.4
ITGA6-204ENST00000412899 PIK3CD-AS1Q5SR53 167 aa12.58□□□□□ -0.4
ITGA6-204ENST00000412899 MED9Q9NWA0 146 aa12.58□□□□□ -0.4
ITGA6-204ENST00000412899 A8MWV9 139 aa12.57□□□□□ -0.4
ITGA6-204ENST00000412899 PSCAO43653 123 aa12.57□□□□□ -0.4
ITGA6-204ENST00000412899 CENPWQ5EE01 88 aa12.57□□□□□ -0.4
ITGA6-204ENST00000412899 DMRTA1Q5VZB9 504 aa12.57□□□□□ -0.4
ITGA6-204ENST00000412899 SYT8Q8NBV8 401 aa12.57□□□□□ -0.4
ITGA6-204ENST00000412899 PHLDA3Q9Y5J5 127 aa12.57□□□□□ -0.4
ITGA6-204ENST00000412899 LOC100131303A0A0U1RQF7 123 aa12.56□□□□□ -0.4
ITGA6-204ENST00000412899 RAB19A4D1S5 217 aa12.56□□□□□ -0.4
ITGA6-204ENST00000412899 SLC25A29Q8N8R3 303 aa12.56□□□□□ -0.4
ITGA6-204ENST00000412899 PRADC1Q9BSG0 188 aa12.56□□□□□ -0.4
ITGA6-204ENST00000412899 IGLV5-52A0A0A0MRZ9 124 aa12.55□□□□□ -0.4
ITGA6-204ENST00000412899 FAM229AH3BQW9 127 aa12.55□□□□□ -0.4
ITGA6-204ENST00000412899 MGST1P10620 155 aaKnown RBP12.55□□□□□ -0.4
ITGA6-204ENST00000412899 GNG4P50150 75 aa12.55□□□□□ -0.4
ITGA6-204ENST00000412899 RPL19P84098 196 aaKnown RBP12.55□□□□□ -0.4
ITGA6-204ENST00000412899 SH2D6Q7Z4S9 175 aa12.55□□□□□ -0.4
ITGA6-204ENST00000412899 PARLQ9H300 379 aa12.55□□□□□ -0.4
ITGA6-204ENST00000412899 JPT2Q9H910 190 aa12.55□□□□□ -0.4
ITGA6-204ENST00000412899 IGHV3-38A0A0C4DH36 116 aa12.54□□□□□ -0.4
ITGA6-204ENST00000412899 TRBV6-4A0A1B0GX49 114 aa12.54□□□□□ -0.4
ITGA6-204ENST00000412899 M0R381 172 aa12.54□□□□□ -0.4
ITGA6-204ENST00000412899 RHOHQ15669 191 aa12.54□□□□□ -0.4
ITGA6-204ENST00000412899 ZFP2Q6ZN57 461 aa12.54□□□□□ -0.4
ITGA6-204ENST00000412899 HAMPP81172 84 aa12.53□□□□□ -0.4
ITGA6-204ENST00000412899 ZFP82Q8N141 532 aa12.53□□□□□ -0.4
ITGA6-204ENST00000412899 DAZAP1Q96EP5 407 aaKnown RBP12.53□□□□□ -0.4
ITGA6-204ENST00000412899 SAMD10Q9BYL1 202 aa12.53□□□□□ -0.4
ITGA6-204ENST00000412899 RBFOX3A6NFN3 312 aa12.52□□□□□ -0.41
ITGA6-204ENST00000412899 IGLV2-8P01709 118 aa12.52□□□□□ -0.41
ITGA6-204ENST00000412899 LYPD6BQ8NI32 183 aa12.52□□□□□ -0.41
ITGA6-204ENST00000412899 SMIM12Q96EX1 92 aa12.52□□□□□ -0.41
ITGA6-204ENST00000412899 CXCL1P09341 107 aa12.51□□□□□ -0.41
ITGA6-204ENST00000412899 TIRAPP58753 221 aa12.51□□□□□ -0.41
ITGA6-204ENST00000412899 Q6ZSN1 163 aa12.51□□□□□ -0.41
ITGA6-204ENST00000412899 NTN5Q8WTR8 489 aaPredicted RBP12.51□□□□□ -0.41
ITGA6-204ENST00000412899 SFRP2Q96HF1 295 aa12.51□□□□□ -0.41
ITGA6-204ENST00000412899 TMEM70Q9BUB7 260 aa12.51□□□□□ -0.41
ITGA6-204ENST00000412899 TRBV20OR9-2A0A075B6H5 130 aa12.5□□□□□ -0.41
ITGA6-204ENST00000412899 A0A087WWL8 130 aa12.5□□□□□ -0.41
ITGA6-204ENST00000412899 TRAV8-6A0A0B4J262 113 aa12.5□□□□□ -0.41
ITGA6-204ENST00000412899 LRCOL1A6NCL2 159 aa12.5□□□□□ -0.41
ITGA6-204ENST00000412899 RHODO00212 210 aa12.5□□□□□ -0.41
ITGA6-204ENST00000412899 LINC01556Q5JQF7 62 aa12.5□□□□□ -0.41
ITGA6-204ENST00000412899 FAM74A4Q5TZK3 123 aa12.5□□□□□ -0.41
ITGA6-204ENST00000412899 UFSP1Q6NVU6 142 aa12.5□□□□□ -0.41
ITGA6-204ENST00000412899 Q9HAA7 133 aa12.5□□□□□ -0.41
ITGA6-204ENST00000412899 BIN3Q9NQY0 253 aa12.5□□□□□ -0.41
ITGA6-204ENST00000412899 IBA57-AS1B1ANH7 110 aa12.49□□□□□ -0.41
ITGA6-204ENST00000412899 OR10J3Q5JRS4 329 aa12.49□□□□□ -0.41
ITGA6-204ENST00000412899 OR2D3Q8NGH3 330 aa12.49□□□□□ -0.41
ITGA6-204ENST00000412899 DMBT1Q9UGM3 2413 aaPredicted RBP12.48□□□□□ -0.41
ITGA6-204ENST00000412899 MUC21A0A0G2JKD1 596 aa12.48□□□□□ -0.41
ITGA6-204ENST00000412899 MUC21A0A140T8X8 626 aa12.48□□□□□ -0.41
ITGA6-204ENST00000412899 SSTP61278 116 aa12.48□□□□□ -0.41
ITGA6-204ENST00000412899 Q8N814 137 aa12.48□□□□□ -0.41
ITGA6-204ENST00000412899 OR10AG1Q8NH19 301 aa12.48□□□□□ -0.41
ITGA6-204ENST00000412899 SSBP4Q9BWG4 385 aaPredicted RBP12.48□□□□□ -0.41
ITGA6-204ENST00000412899 C19orf71A6NCJ1 209 aa12.47□□□□□ -0.41
ITGA6-204ENST00000412899 SNAI2O43623 268 aa12.47□□□□□ -0.41
ITGA6-204ENST00000412899 P01737 135 aa12.47□□□□□ -0.41
ITGA6-204ENST00000412899 IGHV3-30P01768 117 aa12.47□□□□□ -0.41
ITGA6-204ENST00000412899 IGHV3-33P01772 117 aa12.47□□□□□ -0.41
ITGA6-204ENST00000412899 OR5AL1P0C617 328 aa12.47□□□□□ -0.41
ITGA6-204ENST00000412899 IGHV3-30-3P0DP02 117 aa12.47□□□□□ -0.41
ITGA6-204ENST00000412899 IGHV3-30-5P0DP03 117 aa12.47□□□□□ -0.41
ITGA6-204ENST00000412899 RPS20P60866 119 aaKnown RBP12.47□□□□□ -0.41
ITGA6-204ENST00000412899 SPANXN1Q5VSR9 72 aa12.47□□□□□ -0.41
ITGA6-204ENST00000412899 C14orf178Q8N769 122 aaPredicted RBP12.47□□□□□ -0.41
ITGA6-204ENST00000412899 EIF5A2Q9GZV4 153 aaKnown RBP12.47□□□□□ -0.41
ITGA6-204ENST00000412899 HERC1Q15751 4861 aa12.46□□□□□ -0.41
ITGA6-204ENST00000412899 GAGE12JA6NER3 117 aa12.46□□□□□ -0.41
ITGA6-204ENST00000412899 TMEM250H0YL14 139 aa12.46□□□□□ -0.41
ITGA6-204ENST00000412899 GZMBP10144 247 aa12.46□□□□□ -0.41
ITGA6-204ENST00000412899 CEBPGP53567 150 aa12.46□□□□□ -0.41
ITGA6-204ENST00000412899 GAGE1Q13065 139 aa12.46□□□□□ -0.41
ITGA6-204ENST00000412899 GAGE4Q13068 117 aa12.46□□□□□ -0.41
ITGA6-204ENST00000412899 GAGE5Q13069 117 aa12.46□□□□□ -0.41
ITGA6-204ENST00000412899 GAGE13Q4V321 117 aa12.46□□□□□ -0.41
ITGA6-204ENST00000412899 TOR2AQ5JU69 321 aa12.46□□□□□ -0.41
ITGA6-204ENST00000412899 ATP6V0E2Q8NHE4 81 aa12.46□□□□□ -0.41
ITGA6-204ENST00000412899 TPPP3Q9BW30 176 aa12.46□□□□□ -0.41
ITGA6-204ENST00000412899 XKRY2A2RUG3 117 aa12.45□□□□□ -0.42
ITGA6-204ENST00000412899 OCC1Q8TAD7 63 aa12.45□□□□□ -0.42
ITGA6-204ENST00000412899 LELP1Q5T871 98 aa12.44□□□□□ -0.42
ITGA6-204ENST00000412899 FER1L6-AS1Q8NA97 138 aa12.44□□□□□ -0.42
ITGA6-204ENST00000412899 GTSF1LQ9H1H1 148 aa12.44□□□□□ -0.42
ITGA6-204ENST00000412899 Q9UF83 564 aa12.44□□□□□ -0.42
ITGA6-204ENST00000412899 TEX261Q6UWH6 196 aa12.43□□□□□ -0.42
ITGA6-204ENST00000412899 NUDT10Q8NFP7 164 aa12.43□□□□□ -0.42
ITGA6-204ENST00000412899 NUDT11Q96G61 164 aa12.43□□□□□ -0.42
ITGA6-204ENST00000412899 FAM210AQ96ND0 272 aa12.43□□□□□ -0.42
ITGA6-204ENST00000412899 FAM30AQ9NZY2 134 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms