RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 TRBV6-5A0A0K0K1A5 114 aa8.52□□□□□ -1.05
TRAFD1-202ENST00000412615 Q96MF0 132 aa8.52□□□□□ -1.05
TRAFD1-202ENST00000412615 GAGE10A6NGK3 116 aa8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 PRSS29PA6NIE9 313 aa8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 FAM74A4Q5TZK3 123 aa8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 ZFP2Q6ZN57 461 aa8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 NEGR1Q7Z3B1 354 aa8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 MAPKAPK5-AS1Q8N8E1 139 aa8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 SDHAF1A6NFY7 115 aa8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 H3BUT2 72 aa8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 SMIM13P0DJ93 91 aa8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 FBN2P35556 2912 aa8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 AMTNQ6UX39 209 aa8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 GTF2H5Q6ZYL4 71 aa8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 USP9YO00507 2555 aaPredicted RBP8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 ZNF462Q96JM2 2506 aa8.51□□□□□ -1.05
TRAFD1-202ENST00000412615 TRGV11A0A075B6L2 103 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 TRBV27A0A0K0K1C4 114 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 OR11H12B2RN74 326 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 LINC01619G3V211 115 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 SLURP1P55000 103 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 TAL2Q16559 108 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 OR11H1Q8NG94 326 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 OR11H2Q8NH07 326 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 RAB37Q96AX2 223 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 TM2D2Q9BX73 214 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 FXYD2P54710 66 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 CEND1Q8N111 149 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 PEMTQ9UBM1 199 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 TP53TG1Q9Y2A0 90 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 FAM208BQ5VWN6 2430 aa8.5□□□□□ -1.05
TRAFD1-202ENST00000412615 CRYGDP07320 174 aa8.49□□□□□ -1.05
TRAFD1-202ENST00000412615 ZNF56Q15929 161 aa8.49□□□□□ -1.05
TRAFD1-202ENST00000412615 DEFB136Q30KP8 78 aa8.49□□□□□ -1.05
TRAFD1-202ENST00000412615 TMEM141Q96I45 108 aa8.49□□□□□ -1.05
TRAFD1-202ENST00000412615 CSMD2Q7Z408 3487 aa8.49□□□□□ -1.05
TRAFD1-202ENST00000412615 CR1P17927 2039 aa8.49□□□□□ -1.05
TRAFD1-202ENST00000412615 TRAV2A0A0B4J234 112 aa8.49□□□□□ -1.05
TRAFD1-202ENST00000412615 IGIPA6NJ69 53 aa8.49□□□□□ -1.05
TRAFD1-202ENST00000412615 M0QY20 66 aa8.49□□□□□ -1.05
TRAFD1-202ENST00000412615 ZNF876PQ49A33 203 aa8.49□□□□□ -1.05
TRAFD1-202ENST00000412615 USP24Q9UPU5 2620 aa8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 E9PLD3 99 aa8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 RIPPLY3P57055 190 aa8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 DEFB131AP59861 70 aa8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 PAPPA-AS1Q5QFB9 102 aa8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 C18orf65Q6ZTR6 163 aa8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 TRPT1Q86TN4 253 aaKnown RBP8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 RNASE8Q8TDE3 154 aaKnown RBP8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 TIMM17AQ99595 171 aa8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 MYMXA0A1B0GTQ4 84 aa8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 GAGE12BA1L429 117 aa8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 PMVKQ15126 192 aa8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 C4orf3Q8WVX3 66 aa8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 JMJD8Q96S16 334 aa8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 PRRC2AP48634 2157 aaKnown RBP8.48□□□□□ -1.05
TRAFD1-202ENST00000412615 A0A1W2PPM0 123 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 KNCNA6PVL3 124 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 UFSP1Q6NVU6 142 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 POLQO75417 2590 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 K7EP34 96 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 TSHBP01222 138 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 TMEM86BQ8N661 226 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 TEX29Q8N6K0 151 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 NAA38Q9BRA0 125 aaKnown RBP8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 ZNF256Q9Y2P7 627 aaPredicted RBP8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 UBR5O95071 2799 aaPredicted RBP8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 DOPEY2Q9Y3R5 2298 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 A8MTW9 85 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 KHDC1LQ5JSQ8 128 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 HIST1H4GQ99525 98 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 PRADC1Q9BSG0 188 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 CST9LQ9H4G1 147 aa8.47□□□□□ -1.05
TRAFD1-202ENST00000412615 H3BMM0 161 aa8.46□□□□□ -1.06
TRAFD1-202ENST00000412615 RPL39P62891 51 aaKnown RBP8.46□□□□□ -1.06
TRAFD1-202ENST00000412615 RHOHQ15669 191 aa8.46□□□□□ -1.06
TRAFD1-202ENST00000412615 SAMD5Q5TGI4 173 aa8.46□□□□□ -1.06
TRAFD1-202ENST00000412615 MORN3Q6PF18 240 aaPredicted RBP8.46□□□□□ -1.06
TRAFD1-202ENST00000412615 KRTAP1-3Q8IUG1 177 aa8.46□□□□□ -1.06
TRAFD1-202ENST00000412615 DEFB104AQ8WTQ1 72 aa8.46□□□□□ -1.06
TRAFD1-202ENST00000412615 NHP2Q9NX24 153 aaKnown RBP8.46□□□□□ -1.06
TRAFD1-202ENST00000412615 FABP2P12104 132 aa8.46□□□□□ -1.06
TRAFD1-202ENST00000412615 TMEM61Q8N0U2 210 aa8.46□□□□□ -1.06
TRAFD1-202ENST00000412615 ZFYVE26Q68DK2 2539 aa8.46□□□□□ -1.06
TRAFD1-202ENST00000412615 LRRK2Q5S007 2527 aa8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 RBMY1A1P0DJD3 496 aaKnown RBP8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 RBMY1CP0DJD4 496 aa8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 HERVK_113P61574 105 aa8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 RBMY1FQ15415 496 aaKnown RBP8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 DYNLRB2Q8TF09 96 aa8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 SPCS1Q9Y6A9 102 aa8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 ZANQ9Y493 2812 aa8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 IGLV4-69A0A075B6H9 119 aa8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 SCGB2A2Q13296 93 aa8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 NSUN5P1Q3KNT7 163 aa8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 OR5A1Q8NGJ0 315 aa8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 PHLDA1Q8WV24 401 aaPredicted RBP8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 DLX4Q92988 240 aaPredicted RBP8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 CLUHP3Q96NS8 147 aa8.45□□□□□ -1.06
TRAFD1-202ENST00000412615 DUX3Q96PT4 197 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 1631.3 ms