RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 H0Y8X5 98 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 PATE4P0C8F1 98 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 EGR2P11161 476 aaPredicted RBP3.85□□□□□ -1.79
HERC4-205ENST00000412272 C1orf229Q6ZS94 237 aaPredicted RBP3.85□□□□□ -1.79
HERC4-205ENST00000412272 PRNTQ86SH4 94 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 DEFB127Q9H1M4 99 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 A0A087WZ39 114 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 TRAV8-3A0A0A6YYJ7 113 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 IGHV3-15A0A0B4J1V0 119 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 C11orf86A6NJI1 115 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 NDUFB3O43676 98 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 ERHP84090 104 aaKnown RBP3.85□□□□□ -1.79
HERC4-205ENST00000412272 MLANAQ16655 118 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 RMI2Q96E14 147 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 DSCAML1Q8TD84 2053 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 TMEM256-PLSCR3K7ERE1 68 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 GRPP07492 148 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 MUSTN1Q8IVN3 82 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 TMEM167AQ8TBQ9 72 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 LAMA2P24043 3122 aaKnown RBP3.85□□□□□ -1.79
HERC4-205ENST00000412272 IGHV1-69DA0A0B4J2H0 117 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 SDHAF1A6NFY7 115 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 A8MU10 97 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 NTN3O00634 580 aaPredicted RBP3.84□□□□□ -1.79
HERC4-205ENST00000412272 NXPH4O95158 308 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 PLGLAQ15195 96 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 TIMM17AQ99595 171 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 SPRR3Q9UBC9 169 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 IGLV3-19P01714 112 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 ZNF80P51504 273 aaPredicted RBP3.84□□□□□ -1.79
HERC4-205ENST00000412272 RPL39P5Q59GN2 51 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 FAM222AQ5U5X8 452 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 PHF5AQ7RTV0 110 aaKnown RBP3.84□□□□□ -1.79
HERC4-205ENST00000412272 PRRC2AP48634 2157 aaKnown RBP3.84□□□□□ -1.79
HERC4-205ENST00000412272 E7EQL1 145 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 I3L3M4 83 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 ECSCRQ19T08 205 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 Q6ZVQ6 151 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 UBALD1Q8TB05 177 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 NACAE9PAV3 2078 aa3.84□□□□□ -1.79
HERC4-205ENST00000412272 H3BRN7 92 aa3.84□□□□□ -1.8
HERC4-205ENST00000412272 SAA2P0DJI9 122 aaPredicted RBP3.84□□□□□ -1.8
HERC4-205ENST00000412272 ZNF833PQ6ZTB9 187 aa3.84□□□□□ -1.8
HERC4-205ENST00000412272 LINC00846Q9NV44 126 aa3.84□□□□□ -1.8
HERC4-205ENST00000412272 MED13Q9UHV7 2174 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 IGLV4-69A0A075B6H9 119 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 ZNF503-AS2A6NEH8 195 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 A8MUN3 132 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 LHBP01229 141 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 Q1T7F1 81 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 ESRGQ1W209 222 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 USF3Q68DE3 2245 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 TRAV7A0A075B6U4 112 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 EPOPA6NHQ4 379 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 M0R381 172 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 DSCAMO60469 2012 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 FREM1Q5H8C1 2179 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 PLXNB1O43157 2135 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 TRAV23DV6A0A075B6W5 121 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 NDUFS5O43920 106 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 BCE1O60756 84 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 COX6CP09669 75 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 C17orf58Q2M2W7 97 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 OVOL2Q9BRP0 275 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 SNURFQ9Y675 71 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 ZNF407Q9C0G0 2248 aa3.83□□□□□ -1.8
HERC4-205ENST00000412272 SPENQ96T58 3664 aaKnown RBP3.82□□□□□ -1.8
HERC4-205ENST00000412272 IGHV1OR21-1A0A087WYE8 117 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 IGIPA6NJ69 53 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 FAM19A3Q7Z5A8 133 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 Q9H8V8 135 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 NDUFC1O43677 76 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 SAA1P0DJI8 122 aaPredicted RBP3.82□□□□□ -1.8
HERC4-205ENST00000412272 SMIM2Q9BVW6 85 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 ESM1Q9NQ30 184 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 PRR14LQ5THK1 2151 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 IGHV3-43A0A0B4J1X8 118 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 TRBV12-3P01733 135 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 IGHV3-43DP0DP04 118 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 CD59P13987 128 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 RNASE4P34096 147 aaKnown RBP3.82□□□□□ -1.8
HERC4-205ENST00000412272 HOXA4Q00056 320 aaPredicted RBP3.82□□□□□ -1.8
HERC4-205ENST00000412272 WT1-ASQ06250 92 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 Q6ZRP5 223 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 SEM1Q6ZVN7 128 aa3.82□□□□□ -1.8
HERC4-205ENST00000412272 MRPL36Q9P0J6 103 aaKnown RBP3.82□□□□□ -1.8
HERC4-205ENST00000412272 RNF223E7ERA6 249 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 MRGPRG-AS1Q2M3A8 158 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 VMO1Q7Z5L0 202 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 C8orf49Q96NF6 230 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 IGHV3-20A0A0C4DH32 117 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 LEPROTO15243 131 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 IGHV4-34P06331 123 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 MIFP14174 115 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 Q6ZSV7 163 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 TMEM141Q96I45 108 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 HTTP42858 3142 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 RTTNQ86VV8 2226 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 A6NN06 94 aa3.81□□□□□ -1.8
HERC4-205ENST00000412272 DEFB108AA8MXU0 73 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms