RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 KIF25-AS1Q9Y6Z4 181 aa10.08□□□□□ -0.8
LIMS1-205ENST00000410093 SIVA1O15304 175 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 GATA1P15976 413 aaPredicted RBP10.07□□□□□ -0.8
LIMS1-205ENST00000410093 FHL3Q13643 280 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 KRTAP24-1Q3LI83 254 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 RASL10AQ92737 203 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 PTH2Q96A98 100 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 JMJD8Q96S16 334 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 LINC00467Q9BRT7 94 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 ZMAT4Q9H898 229 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 FBN1P35555 2871 aaKnown RBP10.07□□□□□ -0.8
LIMS1-205ENST00000410093 COL6A5A8TX70 2615 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 GAS8-AS1O95177 125 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 NUDT3O95989 172 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 PRSS1P07477 247 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 DEFB114Q30KQ6 69 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 KHDC1LQ5JSQ8 128 aa10.07□□□□□ -0.8
LIMS1-205ENST00000410093 TSSC4Q9Y5U2 329 aaPredicted RBP10.07□□□□□ -0.8
LIMS1-205ENST00000410093 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
LIMS1-205ENST00000410093 TRAV26-2A0A0B4J265 109 aa10.06□□□□□ -0.8
LIMS1-205ENST00000410093 TRBV6-5A0A0K0K1A5 114 aa10.06□□□□□ -0.8
LIMS1-205ENST00000410093 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.06□□□□□ -0.8
LIMS1-205ENST00000410093 MGPP08493 103 aa10.06□□□□□ -0.8
LIMS1-205ENST00000410093 TOMM6Q96B49 74 aa10.06□□□□□ -0.8
LIMS1-205ENST00000410093 H3BMM0 161 aa10.05□□□□□ -0.8
LIMS1-205ENST00000410093 VCYO14598 125 aa10.05□□□□□ -0.8
LIMS1-205ENST00000410093 LINC00315P59091 139 aa10.05□□□□□ -0.8
LIMS1-205ENST00000410093 ODF1Q14990 250 aa10.05□□□□□ -0.8
LIMS1-205ENST00000410093 SPINK13Q1W4C9 94 aa10.05□□□□□ -0.8
LIMS1-205ENST00000410093 DEFB136Q30KP8 78 aa10.05□□□□□ -0.8
LIMS1-205ENST00000410093 DLX4Q92988 240 aaPredicted RBP10.05□□□□□ -0.8
LIMS1-205ENST00000410093 EDA2RQ9HAV5 297 aa10.05□□□□□ -0.8
LIMS1-205ENST00000410093 DNHD1Q96M86 4753 aa10.05□□□□□ -0.8
LIMS1-205ENST00000410093 DPM2O94777 84 aa10.04□□□□□ -0.8
LIMS1-205ENST00000410093 PLNP26678 52 aa10.04□□□□□ -0.8
LIMS1-205ENST00000410093 DEFB131AP59861 70 aa10.04□□□□□ -0.8
LIMS1-205ENST00000410093 TMEM61Q8N0U2 210 aa10.04□□□□□ -0.8
LIMS1-205ENST00000410093 Q8N1Y9 231 aa10.04□□□□□ -0.8
LIMS1-205ENST00000410093 ZNF256Q9Y2P7 627 aaPredicted RBP10.04□□□□□ -0.8
LIMS1-205ENST00000410093 MUC4Q99102 2169 aa10.04□□□□□ -0.8
LIMS1-205ENST00000410093 MXRA5Q9NR99 2828 aa10.03□□□□□ -0.8
LIMS1-205ENST00000410093 H7C1H1 209 aa10.03□□□□□ -0.8
LIMS1-205ENST00000410093 NDUFA7O95182 113 aa10.03□□□□□ -0.8
LIMS1-205ENST00000410093 IGKCP01834 107 aa10.03□□□□□ -0.8
LIMS1-205ENST00000410093 C18orf65Q6ZTR6 163 aa10.03□□□□□ -0.8
LIMS1-205ENST00000410093 LINC00469Q8N7U9 141 aa10.03□□□□□ -0.8
LIMS1-205ENST00000410093 RAX2Q96IS3 184 aa10.03□□□□□ -0.8
LIMS1-205ENST00000410093 KIR2DL4Q99706 377 aa10.03□□□□□ -0.8
LIMS1-205ENST00000410093 A0A087WX48 190 aa10.02□□□□□ -0.8
LIMS1-205ENST00000410093 CCL24O00175 119 aa10.02□□□□□ -0.8
LIMS1-205ENST00000410093 BOD1L2Q8IYS8 172 aa10.02□□□□□ -0.8
LIMS1-205ENST00000410093 C18orf15Q96N68 181 aa10.02□□□□□ -0.8
LIMS1-205ENST00000410093 MAP6D1Q9H9H5 199 aa10.02□□□□□ -0.8
LIMS1-205ENST00000410093 TRAV12-2A0A075B6T6 113 aa10.02□□□□□ -0.81
LIMS1-205ENST00000410093 IGKV3-20P01619 116 aa10.02□□□□□ -0.81
LIMS1-205ENST00000410093 POLR2KP53803 58 aaKnown RBP10.02□□□□□ -0.81
LIMS1-205ENST00000410093 FXYD7P58549 80 aa10.02□□□□□ -0.81
LIMS1-205ENST00000410093 HILS1P60008 231 aa10.02□□□□□ -0.81
LIMS1-205ENST00000410093 GAGE1Q13065 139 aa10.02□□□□□ -0.81
LIMS1-205ENST00000410093 BATFQ16520 125 aa10.02□□□□□ -0.81
LIMS1-205ENST00000410093 ERASQ7Z444 233 aa10.02□□□□□ -0.81
LIMS1-205ENST00000410093 TRPT1Q86TN4 253 aaKnown RBP10.02□□□□□ -0.81
LIMS1-205ENST00000410093 CSTL1Q9H114 145 aa10.02□□□□□ -0.81
LIMS1-205ENST00000410093 ESM1Q9NQ30 184 aa10.02□□□□□ -0.81
LIMS1-205ENST00000410093 TRBV27A0A0K0K1C4 114 aa10.01□□□□□ -0.81
LIMS1-205ENST00000410093 CBY3A6NI87 242 aa10.01□□□□□ -0.81
LIMS1-205ENST00000410093 A8MWV9 139 aa10.01□□□□□ -0.81
LIMS1-205ENST00000410093 ZNF415Q09FC8 603 aa10.01□□□□□ -0.81
LIMS1-205ENST00000410093 SUMO4Q6EEV6 95 aa10.01□□□□□ -0.81
LIMS1-205ENST00000410093 RPL39LQ96EH5 51 aaKnown RBP10.01□□□□□ -0.81
LIMS1-205ENST00000410093 SCGB3A1Q96QR1 104 aa10.01□□□□□ -0.81
LIMS1-205ENST00000410093 FAM110AQ9BQ89 295 aa10.01□□□□□ -0.81
LIMS1-205ENST00000410093 SPXQ9BT56 116 aa10.01□□□□□ -0.81
LIMS1-205ENST00000410093 MCRIP2Q9BUT9 160 aaKnown RBP10.01□□□□□ -0.81
LIMS1-205ENST00000410093 SELENOKQ9Y6D0 94 aa10.01□□□□□ -0.81
LIMS1-205ENST00000410093 F5H697 171 aa10□□□□□ -0.81
LIMS1-205ENST00000410093 RHOHQ15669 191 aa10□□□□□ -0.81
LIMS1-205ENST00000410093 ZNF876PQ49A33 203 aa10□□□□□ -0.81
LIMS1-205ENST00000410093 PAPPA-AS1Q5QFB9 102 aa10□□□□□ -0.81
LIMS1-205ENST00000410093 LINC01006Q8NI28 216 aa10□□□□□ -0.81
LIMS1-205ENST00000410093 TMEM141Q96I45 108 aa10□□□□□ -0.81
LIMS1-205ENST00000410093 MDFICQ9P1T7 246 aa10□□□□□ -0.81
LIMS1-205ENST00000410093 DKK2Q9UBU2 259 aa10□□□□□ -0.81
LIMS1-205ENST00000410093 CYSLTR1Q9Y271 337 aa10□□□□□ -0.81
LIMS1-205ENST00000410093 KNCNA6PVL3 124 aa9.99□□□□□ -0.81
LIMS1-205ENST00000410093 F8VRH5 84 aa9.99□□□□□ -0.81
LIMS1-205ENST00000410093 INSP01308 110 aa9.99□□□□□ -0.81
LIMS1-205ENST00000410093 CRYGDP07320 174 aa9.99□□□□□ -0.81
LIMS1-205ENST00000410093 CD300EQ496F6 205 aaPredicted RBP9.99□□□□□ -0.81
LIMS1-205ENST00000410093 ANKRD39Q53RE8 183 aa9.99□□□□□ -0.81
LIMS1-205ENST00000410093 C2orf66Q6UXQ4 117 aa9.99□□□□□ -0.81
LIMS1-205ENST00000410093 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.99□□□□□ -0.81
LIMS1-205ENST00000410093 HHLA3Q9XRX5 114 aa9.99□□□□□ -0.81
LIMS1-205ENST00000410093 M0R2P5 195 aa9.98□□□□□ -0.81
LIMS1-205ENST00000410093 FGF6P10767 208 aa9.98□□□□□ -0.81
LIMS1-205ENST00000410093 HINT1P49773 126 aaPredicted RBP9.98□□□□□ -0.81
LIMS1-205ENST00000410093 SEC11AP67812 179 aa9.98□□□□□ -0.81
LIMS1-205ENST00000410093 STPG4Q8N801 248 aa9.98□□□□□ -0.81
LIMS1-205ENST00000410093 ORAOV1Q8WV07 137 aa9.98□□□□□ -0.81
LIMS1-205ENST00000410093 HIGD1BQ9P298 99 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 340.8 ms