RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 U3KQK5 164 aa9□□□□□ -0.97
CHMP3-204ENST00000409727 IGHV3-73A0A0B4J1V6 119 aa8.99□□□□□ -0.97
CHMP3-204ENST00000409727 IFITM10A6NMD0 228 aa8.99□□□□□ -0.97
CHMP3-204ENST00000409727 F5H697 171 aa8.99□□□□□ -0.97
CHMP3-204ENST00000409727 NPYP01303 97 aa8.99□□□□□ -0.97
CHMP3-204ENST00000409727 AKR1D1P51857 326 aa8.99□□□□□ -0.97
CHMP3-204ENST00000409727 EMP1P54849 157 aa8.99□□□□□ -0.97
CHMP3-204ENST00000409727 COA6Q5JTJ3 125 aaKnown RBP8.99□□□□□ -0.97
CHMP3-204ENST00000409727 TRGV1A0A0A0MS02 117 aa8.98□□□□□ -0.97
CHMP3-204ENST00000409727 PRB2P02812 416 aaPredicted RBP8.98□□□□□ -0.97
CHMP3-204ENST00000409727 NOP10Q9NPE3 64 aaKnown RBP8.98□□□□□ -0.97
CHMP3-204ENST00000409727 PKD1L1Q8TDX9 2849 aa8.98□□□□□ -0.97
CHMP3-204ENST00000409727 KIR2DL5BA0A0G2JN68 375 aa8.98□□□□□ -0.97
CHMP3-204ENST00000409727 KIR2DL5BA0A0G2JPC4 375 aa8.98□□□□□ -0.97
CHMP3-204ENST00000409727 FABP4P15090 132 aa8.98□□□□□ -0.97
CHMP3-204ENST00000409727 ZNF56Q15929 161 aa8.98□□□□□ -0.97
CHMP3-204ENST00000409727 SAMD5Q5TGI4 173 aa8.98□□□□□ -0.97
CHMP3-204ENST00000409727 KIR2DL5AQ8N109 375 aa8.98□□□□□ -0.97
CHMP3-204ENST00000409727 KIR2DL5BQ8NHK3 375 aa8.98□□□□□ -0.97
CHMP3-204ENST00000409727 C16orf74Q96GX8 76 aa8.98□□□□□ -0.97
CHMP3-204ENST00000409727 SPXQ9BT56 116 aa8.98□□□□□ -0.97
CHMP3-204ENST00000409727 KIF25-AS1Q9Y6Z4 181 aa8.98□□□□□ -0.97
CHMP3-204ENST00000409727 TNFRSF6BO95407 300 aa8.97□□□□□ -0.97
CHMP3-204ENST00000409727 PPBPP02775 128 aa8.97□□□□□ -0.97
CHMP3-204ENST00000409727 CRYGDP07320 174 aa8.97□□□□□ -0.97
CHMP3-204ENST00000409727 NIT1Q86X76 327 aa8.97□□□□□ -0.97
CHMP3-204ENST00000409727 ZMAT5Q9UDW3 170 aaKnown RBP8.97□□□□□ -0.97
CHMP3-204ENST00000409727 PLAC8L1A1L4L8 177 aa8.96□□□□□ -0.97
CHMP3-204ENST00000409727 PMCHP20382 165 aa8.96□□□□□ -0.97
CHMP3-204ENST00000409727 IFI27P40305 119 aaPredicted RBP8.96□□□□□ -0.97
CHMP3-204ENST00000409727 LINC00315P59091 139 aa8.96□□□□□ -0.97
CHMP3-204ENST00000409727 Q6ZTI0 123 aa8.96□□□□□ -0.97
CHMP3-204ENST00000409727 PRSS3P2Q8NHM4 247 aa8.96□□□□□ -0.97
CHMP3-204ENST00000409727 IL17DQ8TAD2 202 aa8.96□□□□□ -0.97
CHMP3-204ENST00000409727 RPL39LQ96EH5 51 aaKnown RBP8.96□□□□□ -0.97
CHMP3-204ENST00000409727 MRAP2Q96G30 205 aa8.96□□□□□ -0.97
CHMP3-204ENST00000409727 URB1-AS1Q96HZ7 61 aa8.96□□□□□ -0.97
CHMP3-204ENST00000409727 PMCHL1Q16048 86 aa8.96□□□□□ -0.98
CHMP3-204ENST00000409727 SUMO4Q6EEV6 95 aa8.96□□□□□ -0.98
CHMP3-204ENST00000409727 FAM19A2Q8N3H0 131 aa8.96□□□□□ -0.98
CHMP3-204ENST00000409727 HIST1H2BLQ99880 126 aa8.96□□□□□ -0.98
CHMP3-204ENST00000409727 NRACQ8N912 160 aa8.95□□□□□ -0.98
CHMP3-204ENST00000409727 OR11H2Q8NH07 326 aa8.95□□□□□ -0.98
CHMP3-204ENST00000409727 RASL10AQ92737 203 aa8.95□□□□□ -0.98
CHMP3-204ENST00000409727 MAP1LC3AQ9H492 121 aa8.95□□□□□ -0.98
CHMP3-204ENST00000409727 X6R8D5 127 aa8.95□□□□□ -0.98
CHMP3-204ENST00000409727 GAGE12BA1L429 117 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 A8MWV9 139 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 DEFB4AO15263 64 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 HSBP1O75506 76 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 GAGE7O76087 117 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 IGHV3-53P01767 116 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 LINC00614P0C842 121 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 GAGE12FP0CL80 117 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 GAGE12GP0CL81 117 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 GAGE12IP0CL82 117 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 CFAP126Q5VTH2 177 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 AMTP48728 403 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 FA2HQ7L5A8 372 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 OR10D4PQ8NGN7 298 aa8.94□□□□□ -0.98
CHMP3-204ENST00000409727 DAZ2Q13117 558 aaKnown RBP8.93□□□□□ -0.98
CHMP3-204ENST00000409727 POM121L12Q8N7R1 296 aa8.93□□□□□ -0.98
CHMP3-204ENST00000409727 PTH2Q96A98 100 aa8.93□□□□□ -0.98
CHMP3-204ENST00000409727 TMEM18Q96B42 140 aa8.93□□□□□ -0.98
CHMP3-204ENST00000409727 PACRGQ96M98 296 aaPredicted RBP8.93□□□□□ -0.98
CHMP3-204ENST00000409727 LAMTOR2Q9Y2Q5 125 aa8.93□□□□□ -0.98
CHMP3-204ENST00000409727 TRGV2A0A075B6R0 118 aa8.92□□□□□ -0.98
CHMP3-204ENST00000409727 ESDP10768 282 aa8.92□□□□□ -0.98
CHMP3-204ENST00000409727 OR4C5Q8NGB2 326 aa8.92□□□□□ -0.98
CHMP3-204ENST00000409727 DEFB104AQ8WTQ1 72 aa8.92□□□□□ -0.98
CHMP3-204ENST00000409727 RS1O15537 224 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 LGALS9BQ3B8N2 356 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 PIK3CD-AS1Q5SR53 167 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 Q6ZSN1 163 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 CHCHD1Q96BP2 118 aaKnown RBP8.91□□□□□ -0.98
CHMP3-204ENST00000409727 RETNQ9HD89 108 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 AP5S1Q9NUS5 200 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 ANK2Q01484 3957 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 CMYA5Q8N3K9 4069 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 SMIM9A6NGZ8 99 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 M0QY20 66 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 P0DMU3 169 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 FAM231AP0DMU4 169 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 FAM231CP0DMU5 169 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 DEFB130BP0DP73 79 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 DEFB130AP0DP74 79 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 SUMO2P61956 95 aaKnown RBP8.91□□□□□ -0.98
CHMP3-204ENST00000409727 UFSP1Q6NVU6 142 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 Q6ZWC4 215 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 NEGR1Q7Z3B1 354 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 RNF183Q96D59 192 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 ZNF479Q96JC4 524 aa8.91□□□□□ -0.98
CHMP3-204ENST00000409727 IGHV1-24A0A0C4DH33 117 aa8.9□□□□□ -0.98
CHMP3-204ENST00000409727 IGHV4-28A0A0C4DH34 117 aa8.9□□□□□ -0.98
CHMP3-204ENST00000409727 OVOL2Q9BRP0 275 aa8.9□□□□□ -0.98
CHMP3-204ENST00000409727 NACAE9PAV3 2078 aa8.9□□□□□ -0.99
CHMP3-204ENST00000409727 NBEAL2Q6ZNJ1 2754 aa8.89□□□□□ -0.99
CHMP3-204ENST00000409727 A8MZ25 164 aa8.89□□□□□ -0.99
CHMP3-204ENST00000409727 TCAPO15273 167 aa8.89□□□□□ -0.99
CHMP3-204ENST00000409727 RIPPLY3P57055 190 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms