RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ANXA2RQ3ZCQ2 193 aa9.62□□□□□ -0.87
SMARCB1-203ENST00000407082 C18orf65Q6ZTR6 163 aa9.62□□□□□ -0.87
SMARCB1-203ENST00000407082 KLHL30-AS1Q8NEE0 82 aa9.62□□□□□ -0.87
SMARCB1-203ENST00000407082 DCANP1Q8TF63 244 aa9.62□□□□□ -0.87
SMARCB1-203ENST00000407082 PEMTQ9UBM1 199 aa9.62□□□□□ -0.87
SMARCB1-203ENST00000407082 A0A096LNJ9 63 aa9.61□□□□□ -0.87
SMARCB1-203ENST00000407082 hDV102S1A0JD36 115 aa9.61□□□□□ -0.87
SMARCB1-203ENST00000407082 K7EQG2 157 aa9.61□□□□□ -0.87
SMARCB1-203ENST00000407082 SIVA1O15304 175 aa9.61□□□□□ -0.87
SMARCB1-203ENST00000407082 KRTAP10-11P60412 298 aa9.61□□□□□ -0.87
SMARCB1-203ENST00000407082 MAJINQ3KP22 176 aa9.61□□□□□ -0.87
SMARCB1-203ENST00000407082 SYT8Q8NBV8 401 aa9.61□□□□□ -0.87
SMARCB1-203ENST00000407082 C4orf3Q8WVX3 66 aa9.61□□□□□ -0.87
SMARCB1-203ENST00000407082 IGKV3-7A0A075B6H7 116 aa9.6□□□□□ -0.87
SMARCB1-203ENST00000407082 C7orf71A4D174 169 aa9.6□□□□□ -0.87
SMARCB1-203ENST00000407082 PRSS1P07477 247 aa9.6□□□□□ -0.87
SMARCB1-203ENST00000407082 PRR9Q5T870 116 aa9.6□□□□□ -0.87
SMARCB1-203ENST00000407082 WFDC3Q8IUB2 231 aa9.6□□□□□ -0.87
SMARCB1-203ENST00000407082 OR9G4Q8NGQ1 327 aa9.6□□□□□ -0.87
SMARCB1-203ENST00000407082 B9D2Q9BPU9 175 aa9.6□□□□□ -0.87
SMARCB1-203ENST00000407082 J3KRW8 73 aa9.59□□□□□ -0.87
SMARCB1-203ENST00000407082 DLEU1O43261 78 aa9.59□□□□□ -0.87
SMARCB1-203ENST00000407082 NXPH4O95158 308 aa9.59□□□□□ -0.87
SMARCB1-203ENST00000407082 HOXD3P31249 432 aaPredicted RBP9.59□□□□□ -0.87
SMARCB1-203ENST00000407082 RPL32P62910 135 aaKnown RBP9.59□□□□□ -0.87
SMARCB1-203ENST00000407082 KIR3DS1Q14943 382 aa9.59□□□□□ -0.87
SMARCB1-203ENST00000407082 FOXI2Q6ZQN5 318 aa9.59□□□□□ -0.87
SMARCB1-203ENST00000407082 NRACQ8N912 160 aa9.59□□□□□ -0.87
SMARCB1-203ENST00000407082 SMIM2Q9BVW6 85 aa9.59□□□□□ -0.87
SMARCB1-203ENST00000407082 IGLV2-18A0A075B6J9 118 aa9.58□□□□□ -0.88
SMARCB1-203ENST00000407082 A0A0J9YX75 114 aa9.58□□□□□ -0.88
SMARCB1-203ENST00000407082 LINC01619G3V211 115 aa9.58□□□□□ -0.88
SMARCB1-203ENST00000407082 ZNF25P17030 456 aaPredicted RBP9.58□□□□□ -0.88
SMARCB1-203ENST00000407082 DEFB136Q30KP8 78 aa9.58□□□□□ -0.88
SMARCB1-203ENST00000407082 POM121L12Q8N7R1 296 aa9.58□□□□□ -0.88
SMARCB1-203ENST00000407082 DUX3Q96PT4 197 aa9.58□□□□□ -0.88
SMARCB1-203ENST00000407082 TENM2Q9NT68 2774 aa9.58□□□□□ -0.88
SMARCB1-203ENST00000407082 TRGV11A0A075B6L2 103 aa9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 IGHV4OR15-8A0A075B7B6 117 aa9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 A0A087WW49 117 aa9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 C3orf84H3BNL1 204 aa9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 CCL24O00175 119 aa9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 NUDT3O95989 172 aa9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 PF4P02776 101 aa9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 CDKN1BP46527 198 aa9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 HINT1P49773 126 aaPredicted RBP9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 SYNJ2BPP57105 145 aa9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 SUMO2P61956 95 aaKnown RBP9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 WFDC9Q8NEX5 89 aa9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 OR11H1Q8NG94 326 aa9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 ORAOV1Q8WV07 137 aa9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 RAX2Q96IS3 184 aa9.57□□□□□ -0.88
SMARCB1-203ENST00000407082 BIRC6Q9NR09 4857 aa9.56□□□□□ -0.88
SMARCB1-203ENST00000407082 F6UB75 175 aa9.56□□□□□ -0.88
SMARCB1-203ENST00000407082 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.56□□□□□ -0.88
SMARCB1-203ENST00000407082 DPM2O94777 84 aa9.56□□□□□ -0.88
SMARCB1-203ENST00000407082 ZNF688P0C7X2 276 aa9.56□□□□□ -0.88
SMARCB1-203ENST00000407082 ZMAT4Q9H898 229 aa9.56□□□□□ -0.88
SMARCB1-203ENST00000407082 TRAV12-1A0A0B4J245 112 aa9.55□□□□□ -0.88
SMARCB1-203ENST00000407082 GNRH2O43555 120 aa9.55□□□□□ -0.88
SMARCB1-203ENST00000407082 IGKCP01834 107 aa9.55□□□□□ -0.88
SMARCB1-203ENST00000407082 MGPP08493 103 aa9.55□□□□□ -0.88
SMARCB1-203ENST00000407082 CD7P09564 240 aa9.55□□□□□ -0.88
SMARCB1-203ENST00000407082 RNASE3P12724 160 aaKnown RBP9.55□□□□□ -0.88
SMARCB1-203ENST00000407082 HLA-DRB4P13762 266 aa9.55□□□□□ -0.88
SMARCB1-203ENST00000407082 SEC11AP67812 179 aa9.55□□□□□ -0.88
SMARCB1-203ENST00000407082 C14orf178Q8N769 122 aaPredicted RBP9.55□□□□□ -0.88
SMARCB1-203ENST00000407082 KRTAP17-1Q9BYP8 105 aa9.55□□□□□ -0.88
SMARCB1-203ENST00000407082 HLA-DRB4X5D2U9 266 aa9.55□□□□□ -0.88
SMARCB1-203ENST00000407082 EPPK1P58107 5090 aaKnown RBP9.55□□□□□ -0.88
SMARCB1-203ENST00000407082 IGHV1OR15-1A0A075B7D0 117 aa9.54□□□□□ -0.88
SMARCB1-203ENST00000407082 GATA1P15976 413 aaPredicted RBP9.54□□□□□ -0.88
SMARCB1-203ENST00000407082 PLNP26678 52 aa9.54□□□□□ -0.88
SMARCB1-203ENST00000407082 TFPI2P48307 235 aa9.54□□□□□ -0.88
SMARCB1-203ENST00000407082 TMEM97Q5BJF2 176 aa9.54□□□□□ -0.88
SMARCB1-203ENST00000407082 BOD1L2Q8IYS8 172 aa9.54□□□□□ -0.88
SMARCB1-203ENST00000407082 STPG4Q8N801 248 aa9.54□□□□□ -0.88
SMARCB1-203ENST00000407082 A0A087WX48 190 aa9.53□□□□□ -0.88
SMARCB1-203ENST00000407082 TRAV12-3A0A0B4J271 114 aa9.53□□□□□ -0.88
SMARCB1-203ENST00000407082 A6NDN8 102 aa9.53□□□□□ -0.88
SMARCB1-203ENST00000407082 H7C1H1 209 aa9.53□□□□□ -0.88
SMARCB1-203ENST00000407082 VCYO14598 125 aa9.53□□□□□ -0.88
SMARCB1-203ENST00000407082 NHLRC4P0CG21 123 aaPredicted RBP9.53□□□□□ -0.88
SMARCB1-203ENST00000407082 FHL3Q13643 280 aa9.53□□□□□ -0.88
SMARCB1-203ENST00000407082 ODF1Q14990 250 aa9.53□□□□□ -0.88
SMARCB1-203ENST00000407082 RASL10AQ92737 203 aa9.53□□□□□ -0.88
SMARCB1-203ENST00000407082 TOMM6Q96B49 74 aa9.53□□□□□ -0.88
SMARCB1-203ENST00000407082 C18orf15Q96N68 181 aa9.53□□□□□ -0.88
SMARCB1-203ENST00000407082 TMEM208Q9BTX3 173 aa9.53□□□□□ -0.88
SMARCB1-203ENST00000407082 DNAH3Q8TD57 4116 aa9.52□□□□□ -0.88
SMARCB1-203ENST00000407082 TRAV25A0A0B4J276 109 aa9.52□□□□□ -0.89
SMARCB1-203ENST00000407082 SLURP1P55000 103 aa9.52□□□□□ -0.89
SMARCB1-203ENST00000407082 CMC4P56277 68 aaPredicted RBP9.52□□□□□ -0.89
SMARCB1-203ENST00000407082 FXYD7P58549 80 aa9.52□□□□□ -0.89
SMARCB1-203ENST00000407082 PAPPA-AS1Q5QFB9 102 aa9.52□□□□□ -0.89
SMARCB1-203ENST00000407082 BVES-AS1Q5T3Y7 98 aa9.52□□□□□ -0.89
SMARCB1-203ENST00000407082 DYNLRB2Q8TF09 96 aa9.52□□□□□ -0.89
SMARCB1-203ENST00000407082 C9orf85Q96MD7 179 aa9.52□□□□□ -0.89
SMARCB1-203ENST00000407082 SCGB3A1Q96QR1 104 aa9.52□□□□□ -0.89
SMARCB1-203ENST00000407082 KIR2DL4Q99706 377 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms