RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 KIR2DL4Q99706 377 aa12.48□□□□□ -0.41
NUP50-203ENST00000407019 ANKRD17O75179 2603 aaKnown RBP12.48□□□□□ -0.41
NUP50-203ENST00000407019 MYO18BQ8IUG5 2567 aa12.48□□□□□ -0.41
NUP50-203ENST00000407019 MAP1AP78559 2803 aaPredicted RBP12.48□□□□□ -0.41
NUP50-203ENST00000407019 CSMD2Q7Z408 3487 aa12.47□□□□□ -0.41
NUP50-203ENST00000407019 SMIM13P0DJ93 91 aa12.47□□□□□ -0.41
NUP50-203ENST00000407019 SLURP1P55000 103 aa12.47□□□□□ -0.41
NUP50-203ENST00000407019 AMTNQ6UX39 209 aa12.47□□□□□ -0.41
NUP50-203ENST00000407019 GTF2H5Q6ZYL4 71 aa12.47□□□□□ -0.41
NUP50-203ENST00000407019 CEND1Q8N111 149 aa12.47□□□□□ -0.41
NUP50-203ENST00000407019 Q96MF0 132 aa12.47□□□□□ -0.41
NUP50-203ENST00000407019 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
NUP50-203ENST00000407019 TRBV6-5A0A0K0K1A5 114 aa12.47□□□□□ -0.41
NUP50-203ENST00000407019 OR11H12B2RN74 326 aa12.47□□□□□ -0.41
NUP50-203ENST00000407019 C18orf65Q6ZTR6 163 aa12.47□□□□□ -0.41
NUP50-203ENST00000407019 OR11H1Q8NG94 326 aa12.47□□□□□ -0.41
NUP50-203ENST00000407019 OR11H2Q8NH07 326 aa12.47□□□□□ -0.41
NUP50-203ENST00000407019 NAA38Q9BRA0 125 aaKnown RBP12.47□□□□□ -0.41
NUP50-203ENST00000407019 SDHAF1A6NFY7 115 aa12.46□□□□□ -0.41
NUP50-203ENST00000407019 ZNF56Q15929 161 aa12.46□□□□□ -0.41
NUP50-203ENST00000407019 TAL2Q16559 108 aa12.46□□□□□ -0.41
NUP50-203ENST00000407019 DEFB136Q30KP8 78 aa12.46□□□□□ -0.41
NUP50-203ENST00000407019 TM2D2Q9BX73 214 aa12.46□□□□□ -0.41
NUP50-203ENST00000407019 TRGV11A0A075B6L2 103 aa12.46□□□□□ -0.42
NUP50-203ENST00000407019 UFSP1Q6NVU6 142 aa12.46□□□□□ -0.42
NUP50-203ENST00000407019 TRBV27A0A0K0K1C4 114 aa12.45□□□□□ -0.42
NUP50-203ENST00000407019 CRYGDP07320 174 aa12.45□□□□□ -0.42
NUP50-203ENST00000407019 CBY1Q9Y3M2 126 aa12.45□□□□□ -0.42
NUP50-203ENST00000407019 MYMXA0A1B0GTQ4 84 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 IGIPA6NJ69 53 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 LINC01619G3V211 115 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 K7EP34 96 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 RIPPLY3P57055 190 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 USP24Q9UPU5 2620 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 A0A1W2PPM0 123 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 GAGE12BA1L429 117 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 KNCNA6PVL3 124 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 E9PLD3 99 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 M0QY20 66 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 TSHBP01222 138 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 DEFB104AQ8WTQ1 72 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 TMEM141Q96I45 108 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 CST9LQ9H4G1 147 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 ZNF462Q96JM2 2506 aa12.44□□□□□ -0.42
NUP50-203ENST00000407019 DEFB131AP59861 70 aa12.43□□□□□ -0.42
NUP50-203ENST00000407019 MORN3Q6PF18 240 aaPredicted RBP12.43□□□□□ -0.42
NUP50-203ENST00000407019 TRPT1Q86TN4 253 aaKnown RBP12.43□□□□□ -0.42
NUP50-203ENST00000407019 TIMM17AQ99595 171 aa12.43□□□□□ -0.42
NUP50-203ENST00000407019 PEMTQ9UBM1 199 aa12.43□□□□□ -0.42
NUP50-203ENST00000407019 PRRC2AP48634 2157 aaKnown RBP12.43□□□□□ -0.42
NUP50-203ENST00000407019 RPL39P62891 51 aaKnown RBP12.42□□□□□ -0.42
NUP50-203ENST00000407019 ZNF876PQ49A33 203 aa12.42□□□□□ -0.42
NUP50-203ENST00000407019 C4orf3Q8WVX3 66 aa12.42□□□□□ -0.42
NUP50-203ENST00000407019 PRADC1Q9BSG0 188 aa12.42□□□□□ -0.42
NUP50-203ENST00000407019 NHP2Q9NX24 153 aaKnown RBP12.42□□□□□ -0.42
NUP50-203ENST00000407019 TRAV2A0A0B4J234 112 aa12.42□□□□□ -0.42
NUP50-203ENST00000407019 PMVKQ15126 192 aa12.42□□□□□ -0.42
NUP50-203ENST00000407019 ZNF256Q9Y2P7 627 aaPredicted RBP12.42□□□□□ -0.42
NUP50-203ENST00000407019 USP9YO00507 2555 aaPredicted RBP12.41□□□□□ -0.42
NUP50-203ENST00000407019 K7ERJ3 54 aa12.41□□□□□ -0.42
NUP50-203ENST00000407019 RBMY1A1P0DJD3 496 aaKnown RBP12.41□□□□□ -0.42
NUP50-203ENST00000407019 RBMY1CP0DJD4 496 aa12.41□□□□□ -0.42
NUP50-203ENST00000407019 RBMY1FQ15415 496 aaKnown RBP12.41□□□□□ -0.42
NUP50-203ENST00000407019 PAPPA-AS1Q5QFB9 102 aa12.41□□□□□ -0.42
NUP50-203ENST00000407019 SAMD5Q5TGI4 173 aa12.41□□□□□ -0.42
NUP50-203ENST00000407019 KRTAP1-3Q8IUG1 177 aa12.41□□□□□ -0.42
NUP50-203ENST00000407019 HIST1H4GQ99525 98 aa12.41□□□□□ -0.42
NUP50-203ENST00000407019 FAM208BQ5VWN6 2430 aa12.41□□□□□ -0.42
NUP50-203ENST00000407019 UBR5O95071 2799 aaPredicted RBP12.41□□□□□ -0.42
NUP50-203ENST00000407019 IGLV4-69A0A075B6H9 119 aa12.41□□□□□ -0.42
NUP50-203ENST00000407019 A8MTW9 85 aa12.41□□□□□ -0.42
NUP50-203ENST00000407019 FABP2P12104 132 aa12.41□□□□□ -0.42
NUP50-203ENST00000407019 RBX1P62877 108 aa12.41□□□□□ -0.42
NUP50-203ENST00000407019 KHDC1LQ5JSQ8 128 aa12.41□□□□□ -0.42
NUP50-203ENST00000407019 PHLDA1Q8WV24 401 aaPredicted RBP12.41□□□□□ -0.42
NUP50-203ENST00000407019 SPCS1Q9Y6A9 102 aa12.41□□□□□ -0.42
NUP50-203ENST00000407019 RHOHQ15669 191 aa12.4□□□□□ -0.42
NUP50-203ENST00000407019 POLQO75417 2590 aa12.4□□□□□ -0.43
NUP50-203ENST00000407019 C11orf86A6NJI1 115 aa12.39□□□□□ -0.43
NUP50-203ENST00000407019 H3BMM0 161 aa12.39□□□□□ -0.43
NUP50-203ENST00000407019 NSUN5P1Q3KNT7 163 aa12.39□□□□□ -0.43
NUP50-203ENST00000407019 TMEM61Q8N0U2 210 aa12.39□□□□□ -0.43
NUP50-203ENST00000407019 DUX3Q96PT4 197 aa12.39□□□□□ -0.43
NUP50-203ENST00000407019 TRBV7-3A0A075B6L6 115 aa12.39□□□□□ -0.43
NUP50-203ENST00000407019 HERVK_113P61574 105 aa12.39□□□□□ -0.43
NUP50-203ENST00000407019 OCIAD2Q56VL3 154 aa12.39□□□□□ -0.43
NUP50-203ENST00000407019 OR5A1Q8NGJ0 315 aa12.39□□□□□ -0.43
NUP50-203ENST00000407019 AGRNO00468 2067 aa12.38□□□□□ -0.43
NUP50-203ENST00000407019 DYNLRB2Q8TF09 96 aa12.38□□□□□ -0.43
NUP50-203ENST00000407019 ZANQ9Y493 2812 aa12.38□□□□□ -0.43
NUP50-203ENST00000407019 RBMY1BA6NDE4 496 aaKnown RBP12.38□□□□□ -0.43
NUP50-203ENST00000407019 RBMY1EA6NEQ0 496 aaKnown RBP12.38□□□□□ -0.43
NUP50-203ENST00000407019 ZNF815PA8K554 130 aa12.38□□□□□ -0.43
NUP50-203ENST00000407019 RBMY1DP0C7P1 496 aaKnown RBP12.38□□□□□ -0.43
NUP50-203ENST00000407019 SCGB2A2Q13296 93 aa12.38□□□□□ -0.43
NUP50-203ENST00000407019 TMEM86BQ8N661 226 aa12.38□□□□□ -0.43
NUP50-203ENST00000407019 KLHL30-AS1Q8NEE0 82 aa12.38□□□□□ -0.43
NUP50-203ENST00000407019 DOPEY2Q9Y3R5 2298 aa12.37□□□□□ -0.43
NUP50-203ENST00000407019 HTN1P15515 57 aa12.37□□□□□ -0.43
NUP50-203ENST00000407019 EMP1P54849 157 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms