RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ATP7BP35670 1465 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 TRAV14DV4A0A0A6YYC5 116 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.54□□□□□ -2
HMGB1P13-201ENST00000406019 A0A0G2JND7 137 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 CCL16O15467 120 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 C3orf79P0CE67 100 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 CCL3P10147 92 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 CCL5P13501 91 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 DSCR4P56555 118 aaPredicted RBP2.54□□□□□ -2
HMGB1P13-201ENST00000406019 CCL8P80075 99 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 DEFB134Q4QY38 66 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 RPL7L1Q6DKI1 246 aaKnown RBP2.54□□□□□ -2
HMGB1P13-201ENST00000406019 NOXRED1Q6NXP6 359 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 LYPD5Q6UWN5 251 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 DEFB107AQ8IZN7 70 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 SERP2Q8N6R1 65 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 MANBALQ9NQG1 85 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 SIPA1L3O60292 1781 aaPredicted RBP2.54□□□□□ -2
HMGB1P13-201ENST00000406019 RGPD2P0DJD1 1756 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 UBR1Q8IWV7 1749 aa2.54□□□□□ -2
HMGB1P13-201ENST00000406019 MAP3K4Q9Y6R4 1608 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 PTPRMP28827 1452 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 TRPM6Q9BX84 2022 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 C19orf71A6NCJ1 209 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 C17orf51A8MQB3 221 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 C17orf98A8MV24 154 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 ZNF736B4DX44 427 aaPredicted RBP2.53□□□□□ -2
HMGB1P13-201ENST00000406019 E7EQL1 145 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 C3orf84H3BNL1 204 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 PSCAO43653 123 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 LY6HO94772 140 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 DYNLT1P63172 113 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 FAM229BQ4G0N7 80 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 CCL4L1Q8NHW4 92 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 NXT2Q9NPJ8 142 aaKnown RBP2.53□□□□□ -2
HMGB1P13-201ENST00000406019 OSTCQ9NRP0 149 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 LY96Q9Y6Y9 160 aa2.53□□□□□ -2
HMGB1P13-201ENST00000406019 LAMB1P07942 1786 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 CRYBG1Q9Y4K1 1723 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 A0A1W2PNN7 141 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 PIRTP0C851 137 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 SMIM13P0DJ93 91 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 RHOHQ15669 191 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 COMMD6Q7Z4G1 85 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 FAM216BQ8N7L0 139 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 SPTSSAQ969W0 71 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 TVP23CQ96ET8 276 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 SLC50A1Q9BRV3 221 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 HIGD2AQ9BW72 106 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 ADCY10Q96PN6 1610 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 EML6Q6ZMW3 1958 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 ZMYM4Q5VZL5 1548 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 ZNF407Q9C0G0 2248 aa2.52□□□□□ -2.01
HMGB1P13-201ENST00000406019 NUP188Q5SRE5 1749 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 PHRF1Q9P1Y6 1649 aaKnown RBP2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 SNRPGP15A8MWD9 76 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 ATP5EP56381 51 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 UBE2G1P62253 170 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 ATP11AUNQ6ZP68 121 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 MIR17HGQ75NE6 70 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 LINC00304Q8N9R0 145 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 LINC01600Q96MT4 127 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 CST11Q9H112 138 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 TAS2R4Q9NYW5 299 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 NWD1Q149M9 1564 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 CDC42BPGQ6DT37 1551 aa2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 NKTRP30414 1462 aaKnown RBP2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 ARHGEF28Q8N1W1 1705 aaKnown RBP2.51□□□□□ -2.01
HMGB1P13-201ENST00000406019 MYOM1P52179 1685 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 SNRNP200O75643 2136 aaKnown RBP2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 NUP98P52948 1817 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 A0A1W2PNM2 257 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 H7BZZ5 65 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGLV1-51P01701 117 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 PRB4P10163 310 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 COX8AP10176 69 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 PEBP1P30086 187 aaKnown RBP2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 SNRPFP62306 86 aaKnown RBP2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 ZNF117Q03924 483 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 FAM223AQ8IWN6 122 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 FAM19A2Q8N3H0 131 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 MGST2Q99735 147 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 BPESC1Q9GZL8 116 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 SCN9AQ15858 1988 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 ANAPC1Q9H1A4 1944 aa2.5□□□□□ -2.01
HMGB1P13-201ENST00000406019 BTAF1O14981 1849 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 AGLP35573 1532 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGKV2D-26A0A0A0MRZ7 120 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGHV3-73A0A0B4J1V6 119 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 CRYM-AS1A6NIL9 109 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 F2Z2F3 143 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 J3QLW9 94 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGKV1-17P01599 117 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 IGLV6-57P01721 117 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 CKS2P33552 79 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 SUPT4H1P63272 117 aaKnown RBP2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 Q1T7F1 81 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 ZCCHC23Q6ZST2 131 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 Q8IYB0 196 aa2.49□□□□□ -2.01
HMGB1P13-201ENST00000406019 TRGV9Q99603 122 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms