RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 C10orf99Q6UWK7 81 aa5.84□□□□□ -1.47
HDAC9-201ENST00000401921 IGKV2D-26A0A0A0MRZ7 120 aa5.84□□□□□ -1.47
HDAC9-201ENST00000401921 IGHV7-4-1A0A0J9YVY3 117 aa5.84□□□□□ -1.47
HDAC9-201ENST00000401921 IGHG2P01859 326 aa5.84□□□□□ -1.47
HDAC9-201ENST00000401921 PRB1P04280 392 aa5.84□□□□□ -1.47
HDAC9-201ENST00000401921 SRSF9Q13242 221 aaKnown RBP eCLIP5.84□□□□□ -1.47
HDAC9-201ENST00000401921 DEFB112Q30KQ8 113 aa5.84□□□□□ -1.47
HDAC9-201ENST00000401921 AMTNQ6UX39 209 aa5.84□□□□□ -1.47
HDAC9-201ENST00000401921 PIFOQ8TCI5 191 aa5.84□□□□□ -1.47
HDAC9-201ENST00000401921 MRPL53Q96EL3 112 aaKnown RBP5.84□□□□□ -1.47
HDAC9-201ENST00000401921 SMIM2Q9BVW6 85 aa5.84□□□□□ -1.47
HDAC9-201ENST00000401921 AVPP01185 164 aa5.84□□□□□ -1.48
HDAC9-201ENST00000401921 SNRPD3P62318 126 aaKnown RBP5.84□□□□□ -1.48
HDAC9-201ENST00000401921 SPXQ9BT56 116 aa5.84□□□□□ -1.48
HDAC9-201ENST00000401921 CHAC1Q9BUX1 264 aa5.84□□□□□ -1.48
HDAC9-201ENST00000401921 JPT2Q9H910 190 aa5.84□□□□□ -1.48
HDAC9-201ENST00000401921 NOTCH2Q04721 2471 aa5.83□□□□□ -1.48
HDAC9-201ENST00000401921 ORMDL2Q53FV1 153 aa5.83□□□□□ -1.48
HDAC9-201ENST00000401921 Q6ZUT4 128 aa5.83□□□□□ -1.48
HDAC9-201ENST00000401921 SPINK13Q1W4C9 94 aa5.83□□□□□ -1.48
HDAC9-201ENST00000401921 SFTA2Q6UW10 78 aa5.83□□□□□ -1.48
HDAC9-201ENST00000401921 C2orf66Q6UXQ4 117 aa5.83□□□□□ -1.48
HDAC9-201ENST00000401921 COX8CQ7Z4L0 72 aa5.83□□□□□ -1.48
HDAC9-201ENST00000401921 KIR2DL4Q99706 377 aa5.83□□□□□ -1.48
HDAC9-201ENST00000401921 BEX4Q9NWD9 120 aaPredicted RBP5.83□□□□□ -1.48
HDAC9-201ENST00000401921 KLK9Q9UKQ9 250 aa5.83□□□□□ -1.48
HDAC9-201ENST00000401921 A6NDX4 124 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 GAGE12JA6NER3 117 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 PRSS29PA6NIE9 313 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 RNF223E7ERA6 249 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 GAGE7O76087 117 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 GAGE12FP0CL80 117 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 GAGE12GP0CL81 117 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 GAGE12IP0CL82 117 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 COX6B1P14854 86 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 SRSF2Q01130 221 aaKnown RBP5.82□□□□□ -1.48
HDAC9-201ENST00000401921 GAGE4Q13068 117 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 ZFAND2AQ8N6M9 145 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 RAX2Q96IS3 184 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 PRRC2AP48634 2157 aaKnown RBP5.82□□□□□ -1.48
HDAC9-201ENST00000401921 EPG5Q9HCE0 2579 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 FXYD2P54710 66 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 XGP55808 180 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 TMEM170BQ5T4T1 132 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 U3KQE9 123 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 TRBV25-1A0A075B6N4 114 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 IGHV3-73A0A0B4J1V6 119 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 H7C1H1 209 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 FGF6P10767 208 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 CNFNQ9BYD5 112 aa5.82□□□□□ -1.48
HDAC9-201ENST00000401921 M0QXV9 152 aa5.81□□□□□ -1.48
HDAC9-201ENST00000401921 FOXI1Q12951 378 aa5.81□□□□□ -1.48
HDAC9-201ENST00000401921 C11orf44Q8N8P7 122 aa5.81□□□□□ -1.48
HDAC9-201ENST00000401921 LENEPQ9Y5L5 61 aa5.81□□□□□ -1.48
HDAC9-201ENST00000401921 TRBV20-1A0A075B6N2 111 aa5.81□□□□□ -1.48
HDAC9-201ENST00000401921 TTC32Q5I0X7 151 aa5.81□□□□□ -1.48
HDAC9-201ENST00000401921 NRACQ8N912 160 aa5.81□□□□□ -1.48
HDAC9-201ENST00000401921 A0A087WX48 190 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 DUX3Q96PT4 197 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 TM2D2Q9BX73 214 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 CDIP1Q9H305 208 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 ZNF815PA8K554 130 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 F8VRH5 84 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 PLNP26678 52 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 DEFB136Q30KP8 78 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 GPHB5Q86YW7 130 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 LINC01356Q8N9X3 169 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 RASL10AQ92737 203 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 TP53TG1Q9Y2A0 90 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 MTORP42345 2549 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 IGHV3OR16-12A0A075B7B8 117 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 HIST2H2BDQ6DRA6 164 aa5.8□□□□□ -1.48
HDAC9-201ENST00000401921 IGHV3-64A0A075B6Q5 118 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 CCDC179H3BU77 68 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 H3BUA1 57 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 DUSP14O95147 198 aaKnown RBP5.79□□□□□ -1.48
HDAC9-201ENST00000401921 PPP1R17O96001 155 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 HERVK_113P61574 105 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 CFAP46Q8IYW2 2715 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 ACANP16112 2415 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 UTP20O75691 2785 aaKnown RBP5.79□□□□□ -1.48
HDAC9-201ENST00000401921 LOC107984156A0A0G2JMH3 177 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 SDHAF1A6NFY7 115 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 IGLL5B9A064 214 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 ZNF575Q86XF7 245 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 ARL17AQ8IVW1 177 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 MAPKAPK5-AS1Q8N8E1 139 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 DYNLRB2Q8TF09 96 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 HHLA3Q9XRX5 114 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 ZANQ9Y493 2812 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 KNCNA6PVL3 124 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 RPL39P62891 51 aaKnown RBP5.79□□□□□ -1.48
HDAC9-201ENST00000401921 GAGE2BQ13066 116 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 ZNF876PQ49A33 203 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 GAGE2EQ4V326 116 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 GAGE2DQ9UEU5 116 aa5.79□□□□□ -1.48
HDAC9-201ENST00000401921 ITPR1Q14643 2758 aa5.78□□□□□ -1.48
HDAC9-201ENST00000401921 E9PLD3 99 aa5.78□□□□□ -1.48
HDAC9-201ENST00000401921 RNASE3P12724 160 aaKnown RBP5.78□□□□□ -1.48
HDAC9-201ENST00000401921 HLA-DRB4P13762 266 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 310 ms