RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 AHCTF1Q8WYP5 2266 aa7.46□□□□□ -1.21
SMAD9-203ENST00000399275 GATA3P23771 443 aa7.46□□□□□ -1.21
SMAD9-203ENST00000399275 RPS28P62857 69 aaKnown RBP7.46□□□□□ -1.21
SMAD9-203ENST00000399275 MINOS1Q5TGZ0 78 aa7.46□□□□□ -1.21
SMAD9-203ENST00000399275 MINOS1-NBL1R4GNA1 71 aa7.46□□□□□ -1.21
SMAD9-203ENST00000399275 NUP210Q8TEM1 1887 aaPredicted RBP7.46□□□□□ -1.22
SMAD9-203ENST00000399275 C11orf53Q8IXP5 236 aa7.46□□□□□ -1.22
SMAD9-203ENST00000399275 TRBV6-1A0A0K0K1D8 114 aa7.46□□□□□ -1.22
SMAD9-203ENST00000399275 A0A1B0GXF2 115 aa7.46□□□□□ -1.22
SMAD9-203ENST00000399275 GP9P14770 177 aa7.46□□□□□ -1.22
SMAD9-203ENST00000399275 Q6ZQT7 251 aa7.46□□□□□ -1.22
SMAD9-203ENST00000399275 SCXQ7RTU7 201 aa7.46□□□□□ -1.22
SMAD9-203ENST00000399275 KIAA1549LQ6ZVL6 1849 aa7.45□□□□□ -1.22
SMAD9-203ENST00000399275 IGKV4-1P06312 121 aa7.45□□□□□ -1.22
SMAD9-203ENST00000399275 ZNRF2Q8NHG8 242 aa7.45□□□□□ -1.22
SMAD9-203ENST00000399275 MRPL36Q9P0J6 103 aaKnown RBP7.45□□□□□ -1.22
SMAD9-203ENST00000399275 TRAV7A0A075B6U4 112 aa7.45□□□□□ -1.22
SMAD9-203ENST00000399275 ARFGEF3Q5TH69 2177 aa7.45□□□□□ -1.22
SMAD9-203ENST00000399275 TRBV30A0A0K0K1B3 111 aa7.45□□□□□ -1.22
SMAD9-203ENST00000399275 DEFB112Q30KQ8 113 aa7.45□□□□□ -1.22
SMAD9-203ENST00000399275 MRPL53Q96EL3 112 aaKnown RBP7.45□□□□□ -1.22
SMAD9-203ENST00000399275 ZNRD1Q9P1U0 126 aa7.45□□□□□ -1.22
SMAD9-203ENST00000399275 IGLV1-44P01699 117 aa7.45□□□□□ -1.22
SMAD9-203ENST00000399275 SP5Q6BEB4 398 aaPredicted RBP7.45□□□□□ -1.22
SMAD9-203ENST00000399275 C5orf38Q86SI9 138 aa7.45□□□□□ -1.22
SMAD9-203ENST00000399275 TEX22C9J3V5 150 aa7.44□□□□□ -1.22
SMAD9-203ENST00000399275 Q6JHZ5 121 aa7.44□□□□□ -1.22
SMAD9-203ENST00000399275 IGHV3-16A0A0C4DH30 117 aa7.44□□□□□ -1.22
SMAD9-203ENST00000399275 Q6ZPA2 131 aa7.44□□□□□ -1.22
SMAD9-203ENST00000399275 Q8N976 141 aa7.44□□□□□ -1.22
SMAD9-203ENST00000399275 ZFAND3Q9H8U3 227 aa7.44□□□□□ -1.22
SMAD9-203ENST00000399275 PYGO1Q9Y3Y4 419 aa7.44□□□□□ -1.22
SMAD9-203ENST00000399275 IGHV3OR16-10A0A075B7F0 116 aa7.43□□□□□ -1.22
SMAD9-203ENST00000399275 TRIAP1O43715 76 aa7.43□□□□□ -1.22
SMAD9-203ENST00000399275 PATE2Q6UY27 113 aa7.43□□□□□ -1.22
SMAD9-203ENST00000399275 IGLV2-8P01709 118 aa7.43□□□□□ -1.22
SMAD9-203ENST00000399275 EBI3Q14213 229 aa7.43□□□□□ -1.22
SMAD9-203ENST00000399275 LINC01560Q8TB33 94 aa7.43□□□□□ -1.22
SMAD9-203ENST00000399275 OBSL1O75147 1896 aa7.43□□□□□ -1.22
SMAD9-203ENST00000399275 C19orf71A6NCJ1 209 aa7.43□□□□□ -1.22
SMAD9-203ENST00000399275 MIAQ16674 131 aa7.43□□□□□ -1.22
SMAD9-203ENST00000399275 TOMM6Q96B49 74 aa7.43□□□□□ -1.22
SMAD9-203ENST00000399275 LYPD2Q6UXB3 125 aa7.43□□□□□ -1.22
SMAD9-203ENST00000399275 ZMAT4Q9H898 229 aa7.43□□□□□ -1.22
SMAD9-203ENST00000399275 DYSFO75923 2080 aa7.43□□□□□ -1.22
SMAD9-203ENST00000399275 XCL1P47992 114 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 XCL2Q9UBD3 114 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 KMT2EQ8IZD2 1858 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 TRBV7-6A0A0J9YX20 115 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 FAM223BA6NKX1 122 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 FAM223AQ8IWN6 122 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 LY6G6EA0A0G2JKS1 128 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 C2orf91Q6ZV80 131 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 ZNF491Q8N8L2 437 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 U3KQA8 63 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 TMEM223A0PJW6 202 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 IGHV3-33P01772 117 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 CXCL6P80162 114 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 SPAG11BQ08648 103 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 VMO1Q7Z5L0 202 aa7.42□□□□□ -1.22
SMAD9-203ENST00000399275 IGHV4-30-2A0A087WSY4 118 aa7.41□□□□□ -1.22
SMAD9-203ENST00000399275 IGHV4-59P01825 116 aa7.41□□□□□ -1.22
SMAD9-203ENST00000399275 IGLV3-9A0A075B6K5 115 aa7.41□□□□□ -1.22
SMAD9-203ENST00000399275 TRBV7-3A0A075B6L6 115 aa7.41□□□□□ -1.22
SMAD9-203ENST00000399275 NCR3O14931 201 aa7.41□□□□□ -1.22
SMAD9-203ENST00000399275 FAM110DQ8TAY7 271 aaPredicted RBP7.41□□□□□ -1.22
SMAD9-203ENST00000399275 MBD6Q96DN6 1003 aa7.41□□□□□ -1.22
SMAD9-203ENST00000399275 RPL39LQ96EH5 51 aaKnown RBP7.41□□□□□ -1.22
SMAD9-203ENST00000399275 PRSS22Q9GZN4 317 aa7.41□□□□□ -1.22
SMAD9-203ENST00000399275 TPSG1Q9NRR2 321 aa7.41□□□□□ -1.22
SMAD9-203ENST00000399275 NOTCH4Q99466 2003 aa7.41□□□□□ -1.22
SMAD9-203ENST00000399275 ATRXP46100 2492 aa7.41□□□□□ -1.22
SMAD9-203ENST00000399275 TMEM105Q8N8V8 129 aa7.41□□□□□ -1.22
SMAD9-203ENST00000399275 TICRRQ7Z2Z1 1910 aa7.41□□□□□ -1.22
SMAD9-203ENST00000399275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.41□□□□□ -1.22
SMAD9-203ENST00000399275 IGKV2-29A2NJV5 120 aaPredicted RBP7.41□□□□□ -1.22
SMAD9-203ENST00000399275 ETDCA0A1B0GVM5 59 aa7.4□□□□□ -1.22
SMAD9-203ENST00000399275 A8MZ25 164 aa7.4□□□□□ -1.22
SMAD9-203ENST00000399275 KIR2DL5BQ8NHK3 375 aa7.4□□□□□ -1.22
SMAD9-203ENST00000399275 SDK2Q58EX2 2172 aa7.4□□□□□ -1.22
SMAD9-203ENST00000399275 SPRY2O43597 315 aa7.4□□□□□ -1.22
SMAD9-203ENST00000399275 CD164Q04900 197 aa7.4□□□□□ -1.22
SMAD9-203ENST00000399275 HOXB4P17483 251 aaPredicted RBP7.4□□□□□ -1.23
SMAD9-203ENST00000399275 ZNF672Q499Z4 452 aaPredicted RBP7.4□□□□□ -1.23
SMAD9-203ENST00000399275 GDF5OSQ5U4N7 250 aa7.4□□□□□ -1.23
SMAD9-203ENST00000399275 IGKV1OR2-108A0A075B7D4 117 aa7.4□□□□□ -1.23
SMAD9-203ENST00000399275 IGHV1-58A0A0C4DH39 117 aa7.4□□□□□ -1.23
SMAD9-203ENST00000399275 TIRAPP58753 221 aa7.4□□□□□ -1.23
SMAD9-203ENST00000399275 RHPN1-AS1Q9BWJ2 59 aa7.4□□□□□ -1.23
SMAD9-203ENST00000399275 KLK9Q9UKQ9 250 aa7.4□□□□□ -1.23
SMAD9-203ENST00000399275 APC2O95996 2303 aa7.39□□□□□ -1.23
SMAD9-203ENST00000399275 LYNX1G3V0Z9 82 aa7.39□□□□□ -1.23
SMAD9-203ENST00000399275 LYNX1P0DP58 116 aa7.39□□□□□ -1.23
SMAD9-203ENST00000399275 C9orf85Q96MD7 179 aa7.39□□□□□ -1.23
SMAD9-203ENST00000399275 H0Y9J4 135 aa7.39□□□□□ -1.23
SMAD9-203ENST00000399275 LHBP01229 141 aa7.39□□□□□ -1.23
SMAD9-203ENST00000399275 MSRB1Q9NZV6 116 aa7.39□□□□□ -1.23
SMAD9-203ENST00000399275 UTRNP46939 3433 aa7.39□□□□□ -1.23
SMAD9-203ENST00000399275 EDN2P20800 178 aa7.39□□□□□ -1.23
SMAD9-203ENST00000399275 USMG5Q96IX5 58 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms