RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 NPYP01303 97 aa4.5□□□□□ -1.69
RAPGEF4-203ENST00000397087 HIST2H2BDQ6DRA6 164 aa4.5□□□□□ -1.69
RAPGEF4-203ENST00000397087 DNAJC30Q96LL9 226 aa4.5□□□□□ -1.69
RAPGEF4-203ENST00000397087 LINC01548A6NM66 108 aa4.5□□□□□ -1.69
RAPGEF4-203ENST00000397087 SMAD7O15105 426 aaKnown RBP4.5□□□□□ -1.69
RAPGEF4-203ENST00000397087 CCL25O15444 150 aa4.5□□□□□ -1.69
RAPGEF4-203ENST00000397087 ODF1Q14990 250 aa4.5□□□□□ -1.69
RAPGEF4-203ENST00000397087 ANKRD39Q53RE8 183 aa4.5□□□□□ -1.69
RAPGEF4-203ENST00000397087 PEMTQ9UBM1 199 aa4.5□□□□□ -1.69
RAPGEF4-203ENST00000397087 ANKRD17O75179 2603 aaKnown RBP4.5□□□□□ -1.69
RAPGEF4-203ENST00000397087 TRBV27A0A0K0K1C4 114 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 A0A1B0GWB2 263 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 F6UB75 175 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 SYT8Q8NBV8 401 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 RHPN1-AS1Q9BWJ2 59 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 COX11Q9Y6N1 276 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 RNASE3P12724 160 aaKnown RBP4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 SNRPD3P62318 126 aaKnown RBP4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 UFSP1Q6NVU6 142 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 AMTNQ6UX39 209 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 C2orf91Q6ZV80 131 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 RNASE8Q8TDE3 154 aaKnown RBP4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 NRGNQ92686 78 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 LINC01600Q96MT4 127 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 PYGO1Q9Y3Y4 419 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 RNASE4P34096 147 aaKnown RBP4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 POLR2KP53803 58 aaKnown RBP4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 SCGB1D4Q6XE38 83 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 Q6ZQT7 251 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 C11orf44Q8N8P7 122 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 RNF183Q96D59 192 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 DKK2Q9UBU2 259 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 CR1P17927 2039 aa4.49□□□□□ -1.69
RAPGEF4-203ENST00000397087 H3BRM9 83 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 GAS8-AS1O95177 125 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 BEAN1Q3B7T3 259 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 BVES-AS1Q5T3Y7 98 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 ZFP2Q6ZN57 461 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 PCP2Q8IVA1 136 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 TM2D2Q9BX73 214 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 NHP2Q9NX24 153 aaKnown RBP4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 CRYBG3Q68DQ2 2970 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 CELSR1Q9NYQ6 3014 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 IGHV3-64A0A075B6Q5 118 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 IGHV3-16A0A0C4DH30 117 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 K7ERJ3 54 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 SPXQ9BT56 116 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 HHLA3Q9XRX5 114 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 DPM2O94777 84 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 DEFB112Q30KQ8 113 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 TMEM95Q3KNT9 176 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 UNQ9165/PRO28630Q6UXU0 137 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 ADAMTSL5Q6ZMM2 481 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 NEXN-AS1Q8NBZ9 246 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 TIMM21Q9BVV7 248 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 PHLDA3Q9Y5J5 127 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 AGRNO00468 2067 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 H7C1H1 209 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 M0QXV9 152 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 PRR9Q5T870 116 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 NFE4Q86UQ8 179 aa4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 SPANXB1Q9NS25 103 aaPredicted RBP4.48□□□□□ -1.69
RAPGEF4-203ENST00000397087 FASNP49327 2511 aaKnown RBP4.47□□□□□ -1.69
RAPGEF4-203ENST00000397087 SMIM17P0DL12 118 aa4.47□□□□□ -1.69
RAPGEF4-203ENST00000397087 SUMO2P61956 95 aaKnown RBP4.47□□□□□ -1.69
RAPGEF4-203ENST00000397087 C14orf178Q8N769 122 aaPredicted RBP4.47□□□□□ -1.69
RAPGEF4-203ENST00000397087 RASL10AQ92737 203 aa4.47□□□□□ -1.69
RAPGEF4-203ENST00000397087 IGHV3OR16-12A0A075B7B8 117 aa4.47□□□□□ -1.69
RAPGEF4-203ENST00000397087 IGKCP01834 107 aa4.47□□□□□ -1.69
RAPGEF4-203ENST00000397087 TMEM158Q8WZ71 300 aa4.47□□□□□ -1.69
RAPGEF4-203ENST00000397087 MDFICQ9P1T7 246 aa4.47□□□□□ -1.69
RAPGEF4-203ENST00000397087 IGHV3-73A0A0B4J1V6 119 aa4.47□□□□□ -1.69
RAPGEF4-203ENST00000397087 A6NDN8 102 aa4.47□□□□□ -1.69
RAPGEF4-203ENST00000397087 ITPR1Q14643 2758 aa4.47□□□□□ -1.69
RAPGEF4-203ENST00000397087 TRPT1Q86TN4 253 aaKnown RBP4.47□□□□□ -1.69
RAPGEF4-203ENST00000397087 LOC107984156A0A0G2JMH3 177 aa4.46□□□□□ -1.69
RAPGEF4-203ENST00000397087 C11orf86A6NJI1 115 aa4.46□□□□□ -1.69
RAPGEF4-203ENST00000397087 F8VRH5 84 aa4.46□□□□□ -1.69
RAPGEF4-203ENST00000397087 RHODO00212 210 aa4.46□□□□□ -1.69
RAPGEF4-203ENST00000397087 VCYO14598 125 aa4.46□□□□□ -1.69
RAPGEF4-203ENST00000397087 SRSF9Q13242 221 aaKnown RBP eCLIP4.46□□□□□ -1.69
RAPGEF4-203ENST00000397087 TMEM97Q5BJF2 176 aa4.46□□□□□ -1.69
RAPGEF4-203ENST00000397087 ZC2HC1BQ5TFG8 222 aa4.46□□□□□ -1.69
RAPGEF4-203ENST00000397087 ARL17AQ8IVW1 177 aa4.46□□□□□ -1.69
RAPGEF4-203ENST00000397087 OR5A1Q8NGJ0 315 aa4.46□□□□□ -1.69
RAPGEF4-203ENST00000397087 HIST1H4GQ99525 98 aa4.46□□□□□ -1.69
RAPGEF4-203ENST00000397087 UTP20O75691 2785 aaKnown RBP4.46□□□□□ -1.7
RAPGEF4-203ENST00000397087 A0A087WWL8 130 aa4.46□□□□□ -1.7
RAPGEF4-203ENST00000397087 RNASE1P07998 156 aaKnown RBP4.46□□□□□ -1.7
RAPGEF4-203ENST00000397087 CDKN1BP46527 198 aa4.46□□□□□ -1.7
RAPGEF4-203ENST00000397087 E9PLD3 99 aa4.46□□□□□ -1.7
RAPGEF4-203ENST00000397087 UBE2V1Q13404 147 aa4.46□□□□□ -1.7
RAPGEF4-203ENST00000397087 ZANQ9Y493 2812 aa4.46□□□□□ -1.7
RAPGEF4-203ENST00000397087 IGHV1OR15-1A0A075B7D0 117 aa4.45□□□□□ -1.7
RAPGEF4-203ENST00000397087 APOMO95445 188 aa4.45□□□□□ -1.7
RAPGEF4-203ENST00000397087 TRBV12-3P01733 135 aa4.45□□□□□ -1.7
RAPGEF4-203ENST00000397087 SPCS1Q9Y6A9 102 aa4.45□□□□□ -1.7
RAPGEF4-203ENST00000397087 IGIPA6NJ69 53 aa4.45□□□□□ -1.7
RAPGEF4-203ENST00000397087 A8MWV9 139 aa4.45□□□□□ -1.7
RAPGEF4-203ENST00000397087 H7C423 109 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms