RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.16□□□□□ -0.46
ATP2A3-205ENST00000397041 IGKV2-29A2NJV5 120 aaPredicted RBP12.16□□□□□ -0.46
ATP2A3-205ENST00000397041 PFN2P35080 140 aa12.16□□□□□ -0.46
ATP2A3-205ENST00000397041 AJUBAQ96IF1 538 aa12.15□□□□□ -0.46
ATP2A3-205ENST00000397041 CHD7Q9P2D1 2997 aa12.15□□□□□ -0.46
ATP2A3-205ENST00000397041 IGLV2-11P01706 119 aa12.15□□□□□ -0.46
ATP2A3-205ENST00000397041 LGALS1P09382 135 aaKnown RBP12.15□□□□□ -0.46
ATP2A3-205ENST00000397041 MUSTN1Q8IVN3 82 aa12.15□□□□□ -0.46
ATP2A3-205ENST00000397041 HIVEP3Q5T1R4 2406 aa12.15□□□□□ -0.46
ATP2A3-205ENST00000397041 LINC01548A6NM66 108 aa12.15□□□□□ -0.46
ATP2A3-205ENST00000397041 IFITM1P13164 125 aa12.15□□□□□ -0.46
ATP2A3-205ENST00000397041 SP5Q6BEB4 398 aaPredicted RBP12.15□□□□□ -0.46
ATP2A3-205ENST00000397041 LRP4O75096 1905 aa12.15□□□□□ -0.47
ATP2A3-205ENST00000397041 DEFB130BP0DP73 79 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 DEFB130AP0DP74 79 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 NSUN5P1Q3KNT7 163 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 C2orf91Q6ZV80 131 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 SPAG8Q99932 426 aaPredicted RBP12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 USP9YO00507 2555 aaPredicted RBP12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 C16orf54Q6UWD8 224 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 UNQ9165/PRO28630Q6UXU0 137 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 USP9XQ93008 2570 aaPredicted RBP12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 BRCA2P51587 3418 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 CPAMD8Q8IZJ3 1885 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 FOXI1Q12951 378 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 CEP192Q8TEP8 1941 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 E9PLD3 99 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 IGLC6P0CF74 106 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 TEN1Q86WV5 123 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 URB1-AS1Q96HZ7 61 aa12.14□□□□□ -0.47
ATP2A3-205ENST00000397041 RHODO00212 210 aa12.13□□□□□ -0.47
ATP2A3-205ENST00000397041 RS1O15537 224 aa12.13□□□□□ -0.47
ATP2A3-205ENST00000397041 C9orf47Q6ZRZ4 202 aa12.13□□□□□ -0.47
ATP2A3-205ENST00000397041 RANBP2P49792 3224 aaKnown RBP12.13□□□□□ -0.47
ATP2A3-205ENST00000397041 TRBV12-3P01733 135 aa12.13□□□□□ -0.47
ATP2A3-205ENST00000397041 LAMA2P24043 3122 aaKnown RBP12.13□□□□□ -0.47
ATP2A3-205ENST00000397041 RNF223E7ERA6 249 aa12.13□□□□□ -0.47
ATP2A3-205ENST00000397041 SS18L2Q9UHA2 77 aa12.13□□□□□ -0.47
ATP2A3-205ENST00000397041 IGHV4-38-2P0DP08 117 aa12.13□□□□□ -0.47
ATP2A3-205ENST00000397041 S100A7L2Q5SY68 101 aa12.13□□□□□ -0.47
ATP2A3-205ENST00000397041 TOMM6Q96B49 74 aa12.13□□□□□ -0.47
ATP2A3-205ENST00000397041 MKI67P46013 3256 aaKnown RBP12.13□□□□□ -0.47
ATP2A3-205ENST00000397041 IGF1P05019 195 aa12.12□□□□□ -0.47
ATP2A3-205ENST00000397041 MAPKAPK5-AS1Q8N8E1 139 aa12.12□□□□□ -0.47
ATP2A3-205ENST00000397041 DSCAMO60469 2012 aa12.12□□□□□ -0.47
ATP2A3-205ENST00000397041 TRAV12-1A0A0B4J245 112 aa12.12□□□□□ -0.47
ATP2A3-205ENST00000397041 DAND5Q8N907 189 aa12.12□□□□□ -0.47
ATP2A3-205ENST00000397041 C9orf153Q5TBE3 101 aa12.11□□□□□ -0.47
ATP2A3-205ENST00000397041 ANKRD29Q8N6D5 301 aa12.11□□□□□ -0.47
ATP2A3-205ENST00000397041 ANKRD11Q6UB99 2663 aaPredicted RBP12.11□□□□□ -0.47
ATP2A3-205ENST00000397041 IGHV4-59P01825 116 aa12.11□□□□□ -0.47
ATP2A3-205ENST00000397041 DEFB136Q30KP8 78 aa12.11□□□□□ -0.47
ATP2A3-205ENST00000397041 GAS8-AS1O95177 125 aa12.11□□□□□ -0.47
ATP2A3-205ENST00000397041 HTTP42858 3142 aa12.11□□□□□ -0.47
ATP2A3-205ENST00000397041 Q71RC1 249 aaPredicted RBP12.11□□□□□ -0.47
ATP2A3-205ENST00000397041 ZNF48Q96MX3 618 aaPredicted RBP12.11□□□□□ -0.47
ATP2A3-205ENST00000397041 IGHV4-61A0A0C4DH41 118 aa12.1□□□□□ -0.47
ATP2A3-205ENST00000397041 CRYGBP07316 175 aa12.1□□□□□ -0.47
ATP2A3-205ENST00000397041 RHOHQ15669 191 aa12.1□□□□□ -0.47
ATP2A3-205ENST00000397041 C5orf56Q8N8D9 126 aa12.1□□□□□ -0.47
ATP2A3-205ENST00000397041 LINC01356Q8N9X3 169 aa12.1□□□□□ -0.47
ATP2A3-205ENST00000397041 GAGE7O76087 117 aa12.1□□□□□ -0.47
ATP2A3-205ENST00000397041 GAGE12FP0CL80 117 aa12.1□□□□□ -0.47
ATP2A3-205ENST00000397041 GAGE12GP0CL81 117 aa12.1□□□□□ -0.47
ATP2A3-205ENST00000397041 GAGE12IP0CL82 117 aa12.1□□□□□ -0.47
ATP2A3-205ENST00000397041 Q8N1Y9 231 aa12.09□□□□□ -0.47
ATP2A3-205ENST00000397041 Q9H8V8 135 aa12.09□□□□□ -0.47
ATP2A3-205ENST00000397041 PIEZO1Q92508 2521 aa12.09□□□□□ -0.47
ATP2A3-205ENST00000397041 CCDC140Q96MF4 163 aa12.09□□□□□ -0.47
ATP2A3-205ENST00000397041 DSCR9P59020 149 aa12.08□□□□□ -0.47
ATP2A3-205ENST00000397041 GAGE6Q13070 117 aa12.08□□□□□ -0.48
ATP2A3-205ENST00000397041 Q8NA96 180 aa12.08□□□□□ -0.48
ATP2A3-205ENST00000397041 LAMTOR3Q9UHA4 124 aa12.08□□□□□ -0.48
ATP2A3-205ENST00000397041 NXPH4O95158 308 aa12.08□□□□□ -0.48
ATP2A3-205ENST00000397041 TRAV26-1A0A087WT03 109 aa12.08□□□□□ -0.48
ATP2A3-205ENST00000397041 PRSS47A8MTI9 375 aa12.07□□□□□ -0.48
ATP2A3-205ENST00000397041 HOXD3P31249 432 aaPredicted RBP12.07□□□□□ -0.48
ATP2A3-205ENST00000397041 MDFICQ9P1T7 246 aa12.07□□□□□ -0.48
ATP2A3-205ENST00000397041 DEFB112Q30KQ8 113 aa12.07□□□□□ -0.48
ATP2A3-205ENST00000397041 LINC01620Q4KN68 170 aa12.07□□□□□ -0.48
ATP2A3-205ENST00000397041 RNF185Q96GF1 192 aa12.07□□□□□ -0.48
ATP2A3-205ENST00000397041 SMAD5-AS1Q9Y6J3 95 aa12.06□□□□□ -0.48
ATP2A3-205ENST00000397041 TM2D2Q9BX73 214 aa12.06□□□□□ -0.48
ATP2A3-205ENST00000397041 LINC01619G3V211 115 aa12.05□□□□□ -0.48
ATP2A3-205ENST00000397041 ADORA2A-AS1P86434 159 aa12.05□□□□□ -0.48
ATP2A3-205ENST00000397041 APRG1Q8IVJ8 170 aa12.05□□□□□ -0.48
ATP2A3-205ENST00000397041 INAFM2P0DMQ5 153 aa12.05□□□□□ -0.48
ATP2A3-205ENST00000397041 NDUFA11Q86Y39 141 aa12.05□□□□□ -0.48
ATP2A3-205ENST00000397041 SPANXB1Q9NS25 103 aaPredicted RBP12.05□□□□□ -0.48
ATP2A3-205ENST00000397041 U3KQE9 123 aa12.05□□□□□ -0.48
ATP2A3-205ENST00000397041 CEMP1Q6PRD7 247 aaPredicted RBP12.05□□□□□ -0.48
ATP2A3-205ENST00000397041 TCL1BO95988 128 aa12.04□□□□□ -0.48
ATP2A3-205ENST00000397041 TMEM243Q9BU79 118 aa12.04□□□□□ -0.48
ATP2A3-205ENST00000397041 LAMA3Q16787 3333 aa12.04□□□□□ -0.48
ATP2A3-205ENST00000397041 CRYBA4P53673 196 aa12.04□□□□□ -0.48
ATP2A3-205ENST00000397041 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
ATP2A3-205ENST00000397041 C3orf56Q8N813 242 aa12.03□□□□□ -0.48
ATP2A3-205ENST00000397041 SIRPDQ9H106 197 aa12.03□□□□□ -0.48
ATP2A3-205ENST00000397041 H3BUA1 57 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms