RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CFAP46Q8IYW2 2715 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 C19orf84I3L1E1 186 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 APOMO95445 188 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 ZNF580Q9UK33 172 aa10.39□□□□□ -0.75
NUP98-204ENST00000397004 RPL11P62913 178 aaKnown RBP10.38□□□□□ -0.75
NUP98-204ENST00000397004 IGHV4OR15-8A0A075B7B6 117 aa10.38□□□□□ -0.75
NUP98-204ENST00000397004 A0A087WW49 117 aa10.38□□□□□ -0.75
NUP98-204ENST00000397004 FAM223BA6NKX1 122 aa10.38□□□□□ -0.75
NUP98-204ENST00000397004 IGHV3-30P01768 117 aa10.38□□□□□ -0.75
NUP98-204ENST00000397004 IGHV3-30-5P0DP03 117 aa10.38□□□□□ -0.75
NUP98-204ENST00000397004 FAM223AQ8IWN6 122 aa10.38□□□□□ -0.75
NUP98-204ENST00000397004 FLNCQ14315 2725 aa10.38□□□□□ -0.75
NUP98-204ENST00000397004 KLLNB2CW77 178 aa10.38□□□□□ -0.75
NUP98-204ENST00000397004 NDUFA4O00483 81 aa10.38□□□□□ -0.75
NUP98-204ENST00000397004 TCL1BO95988 128 aa10.38□□□□□ -0.75
NUP98-204ENST00000397004 IGHV4-38-2P0DP08 117 aa10.38□□□□□ -0.75
NUP98-204ENST00000397004 LY6EQ16553 131 aa10.38□□□□□ -0.75
NUP98-204ENST00000397004 MOB4Q9Y3A3 225 aa10.38□□□□□ -0.75
NUP98-204ENST00000397004 OVOL1O14753 267 aa10.37□□□□□ -0.75
NUP98-204ENST00000397004 SCGB1D4Q6XE38 83 aa10.37□□□□□ -0.75
NUP98-204ENST00000397004 TGFAP01135 160 aa10.37□□□□□ -0.75
NUP98-204ENST00000397004 PSMB2P49721 201 aa10.37□□□□□ -0.75
NUP98-204ENST00000397004 RHPN1-AS1Q9BWJ2 59 aa10.37□□□□□ -0.75
NUP98-204ENST00000397004 SYT8Q8NBV8 401 aa10.37□□□□□ -0.75
NUP98-204ENST00000397004 C1QTNF4Q9BXJ3 329 aa10.37□□□□□ -0.75
NUP98-204ENST00000397004 LOC107984156A0A0G2JMH3 177 aa10.36□□□□□ -0.75
NUP98-204ENST00000397004 SCGB1A1P11684 91 aa10.36□□□□□ -0.75
NUP98-204ENST00000397004 SRSF9Q13242 221 aaKnown RBP eCLIP10.36□□□□□ -0.75
NUP98-204ENST00000397004 ARL17AQ8IVW1 177 aa10.36□□□□□ -0.75
NUP98-204ENST00000397004 ZNF418Q8TF45 676 aaPredicted RBP10.36□□□□□ -0.75
NUP98-204ENST00000397004 MDFICQ9P1T7 246 aa10.36□□□□□ -0.75
NUP98-204ENST00000397004 CIDEAO60543 219 aa10.36□□□□□ -0.75
NUP98-204ENST00000397004 MED14OSP0DP75 135 aa10.36□□□□□ -0.75
NUP98-204ENST00000397004 MT-ATP8P03928 68 aa10.35□□□□□ -0.75
NUP98-204ENST00000397004 P0DMU3 169 aa10.35□□□□□ -0.75
NUP98-204ENST00000397004 FAM231AP0DMU4 169 aa10.35□□□□□ -0.75
NUP98-204ENST00000397004 FAM231CP0DMU5 169 aa10.35□□□□□ -0.75
NUP98-204ENST00000397004 DCANP1Q8TF63 244 aa10.35□□□□□ -0.75
NUP98-204ENST00000397004 CSPG4Q6UVK1 2322 aa10.35□□□□□ -0.75
NUP98-204ENST00000397004 ELANEP08246 267 aa10.35□□□□□ -0.75
NUP98-204ENST00000397004 XGP55808 180 aa10.35□□□□□ -0.75
NUP98-204ENST00000397004 DLX4Q92988 240 aaPredicted RBP10.35□□□□□ -0.75
NUP98-204ENST00000397004 FAM104AQ969W3 186 aa10.35□□□□□ -0.75
NUP98-204ENST00000397004 TRAV12-3A0A0B4J271 114 aa10.34□□□□□ -0.75
NUP98-204ENST00000397004 ZNF876PQ49A33 203 aa10.34□□□□□ -0.75
NUP98-204ENST00000397004 C10orf99Q6UWK7 81 aa10.34□□□□□ -0.75
NUP98-204ENST00000397004 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.34□□□□□ -0.751e-6■■■■□ 25.9
NUP98-204ENST00000397004 SDHAF1A6NFY7 115 aa10.34□□□□□ -0.75
NUP98-204ENST00000397004 IGHV4-39P01824 125 aa10.34□□□□□ -0.75
NUP98-204ENST00000397004 TMEM95Q3KNT9 176 aa10.34□□□□□ -0.75
NUP98-204ENST00000397004 ATP6V0BQ99437 205 aa10.34□□□□□ -0.75
NUP98-204ENST00000397004 KIR2DL4Q99706 377 aa10.34□□□□□ -0.75
NUP98-204ENST00000397004 TRAV12-2A0A075B6T6 113 aa10.34□□□□□ -0.75
NUP98-204ENST00000397004 PMVKQ15126 192 aa10.34□□□□□ -0.75
NUP98-204ENST00000397004 SLC25A29Q8N8R3 303 aa10.34□□□□□ -0.75
NUP98-204ENST00000397004 IGHV1-69DA0A0B4J2H0 117 aa10.33□□□□□ -0.76
NUP98-204ENST00000397004 IGHV1-69P01742 117 aa10.33□□□□□ -0.76
NUP98-204ENST00000397004 SCGB2A2Q13296 93 aa10.33□□□□□ -0.76
NUP98-204ENST00000397004 CLUHP3Q96NS8 147 aa10.33□□□□□ -0.76
NUP98-204ENST00000397004 DOPEY2Q9Y3R5 2298 aa10.33□□□□□ -0.76
NUP98-204ENST00000397004 IGHV4-61A0A0C4DH41 118 aa10.33□□□□□ -0.76
NUP98-204ENST00000397004 TRBV27A0A0K0K1C4 114 aa10.32□□□□□ -0.76
NUP98-204ENST00000397004 IGHG2P01859 326 aa10.32□□□□□ -0.76
NUP98-204ENST00000397004 TMEM170BQ5T4T1 132 aa10.32□□□□□ -0.76
NUP98-204ENST00000397004 RPL32P62910 135 aaKnown RBP10.32□□□□□ -0.76
NUP98-204ENST00000397004 FAM74A4Q5TZK3 123 aa10.32□□□□□ -0.76
NUP98-204ENST00000397004 SBSPONQ8IVN8 264 aa10.32□□□□□ -0.76
NUP98-204ENST00000397004 Q9UF83 564 aa10.32□□□□□ -0.76
NUP98-204ENST00000397004 FBN2P35556 2912 aa10.32□□□□□ -0.76
NUP98-204ENST00000397004 ZNF256Q9Y2P7 627 aaPredicted RBP10.31□□□□□ -0.76
NUP98-204ENST00000397004 IGHV3-64A0A075B6Q5 118 aa10.31□□□□□ -0.76
NUP98-204ENST00000397004 M0QY20 66 aa10.31□□□□□ -0.76
NUP98-204ENST00000397004 IGKV3-20P01619 116 aa10.31□□□□□ -0.76
NUP98-204ENST00000397004 PF4V1P10720 104 aa10.31□□□□□ -0.76
NUP98-204ENST00000397004 H3BUX3 64 aa10.31□□□□□ -0.76
NUP98-204ENST00000397004 IGLV1-40P01703 118 aa10.31□□□□□ -0.76
NUP98-204ENST00000397004 ZNF469Q96JG9 3925 aaPredicted RBP10.3□□□□□ -0.76
NUP98-204ENST00000397004 IGHV3-16A0A0C4DH30 117 aa10.3□□□□□ -0.76
NUP98-204ENST00000397004 J3QR89 54 aa10.3□□□□□ -0.76
NUP98-204ENST00000397004 LGALS9O00182 355 aa10.3□□□□□ -0.76
NUP98-204ENST00000397004 BRI3O95415 125 aa10.3□□□□□ -0.76
NUP98-204ENST00000397004 AVPP01185 164 aa10.3□□□□□ -0.76
NUP98-204ENST00000397004 CFHR3Q02985 330 aa10.3□□□□□ -0.76
NUP98-204ENST00000397004 TIMM17AQ99595 171 aa10.3□□□□□ -0.76
NUP98-204ENST00000397004 PIEZO1Q92508 2521 aa10.3□□□□□ -0.76
NUP98-204ENST00000397004 C9orf85Q96MD7 179 aa10.3□□□□□ -0.76
NUP98-204ENST00000397004 NBPF19A0A087WUL8 3843 aa10.3□□□□□ -0.76
NUP98-204ENST00000397004 F5H697 171 aa10.29□□□□□ -0.76
NUP98-204ENST00000397004 J3QQQ9 107 aa10.29□□□□□ -0.76
NUP98-204ENST00000397004 TRPT1Q86TN4 253 aaKnown RBP10.29□□□□□ -0.76
NUP98-204ENST00000397004 C10orf126Q8N4M7 172 aa10.29□□□□□ -0.76
NUP98-204ENST00000397004 ATP6V0E2Q8NHE4 81 aa10.29□□□□□ -0.76
NUP98-204ENST00000397004 RAX2Q96IS3 184 aa10.29□□□□□ -0.76
NUP98-204ENST00000397004 A6NDX4 124 aa10.29□□□□□ -0.76
NUP98-204ENST00000397004 VCYO14598 125 aa10.29□□□□□ -0.76
NUP98-204ENST00000397004 PRM2P04554 102 aa10.29□□□□□ -0.76
NUP98-204ENST00000397004 FAM159AQ6UWV7 190 aa10.29□□□□□ -0.76
NUP98-204ENST00000397004 Q8N1Y9 231 aa10.29□□□□□ -0.76
NUP98-204ENST00000397004 A4D1N5 150 aa10.29□□□□□ -0.76
NUP98-204ENST00000397004 Q6ZUT4 128 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms