RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TRPT1Q86TN4 253 aaKnown RBP10.11□□□□□ -0.79
NFKB1-202ENST00000394820 DAND5Q8N907 189 aa10.11□□□□□ -0.79
NFKB1-202ENST00000394820 NRGNQ92686 78 aa10.11□□□□□ -0.79
NFKB1-202ENST00000394820 RNF5Q99942 180 aa10.11□□□□□ -0.79
NFKB1-202ENST00000394820 B5MCH6 92 aa10.11□□□□□ -0.79
NFKB1-202ENST00000394820 MT-ATP8P03928 68 aa10.11□□□□□ -0.79
NFKB1-202ENST00000394820 ATP5J2P56134 94 aa10.11□□□□□ -0.79
NFKB1-202ENST00000394820 LY6G5BQ8NDX9 201 aa10.11□□□□□ -0.79
NFKB1-202ENST00000394820 CD28P10747 220 aa10.1□□□□□ -0.79
NFKB1-202ENST00000394820 C11orf86A6NJI1 115 aa10.1□□□□□ -0.79
NFKB1-202ENST00000394820 ID1P41134 155 aa10.1□□□□□ -0.79
NFKB1-202ENST00000394820 Q8N9W7 124 aa10.1□□□□□ -0.79
NFKB1-202ENST00000394820 HHLA3Q9XRX5 114 aa10.1□□□□□ -0.79
NFKB1-202ENST00000394820 ZNF462Q96JM2 2506 aa10.1□□□□□ -0.79
NFKB1-202ENST00000394820 RNASE1P07998 156 aaKnown RBP10.1□□□□□ -0.79
NFKB1-202ENST00000394820 FBXL19-AS1Q494R0 122 aa10.1□□□□□ -0.79
NFKB1-202ENST00000394820 UFSP1Q6NVU6 142 aa10.1□□□□□ -0.79
NFKB1-202ENST00000394820 CEMP1Q6PRD7 247 aaPredicted RBP10.1□□□□□ -0.79
NFKB1-202ENST00000394820 TOMM7Q9P0U1 55 aa10.1□□□□□ -0.79
NFKB1-202ENST00000394820 IGHV3-53P01767 116 aa10.09□□□□□ -0.79
NFKB1-202ENST00000394820 IGLC6P0CF74 106 aa10.09□□□□□ -0.79
NFKB1-202ENST00000394820 NTN5Q8WTR8 489 aaPredicted RBP10.09□□□□□ -0.79
NFKB1-202ENST00000394820 TRAV8-3A0A0A6YYJ7 113 aa10.09□□□□□ -0.79
NFKB1-202ENST00000394820 NPFFO15130 113 aa10.09□□□□□ -0.79
NFKB1-202ENST00000394820 PRM2P04554 102 aa10.09□□□□□ -0.79
NFKB1-202ENST00000394820 LGALS1P09382 135 aaKnown RBP10.09□□□□□ -0.79
NFKB1-202ENST00000394820 MEIG1Q5JSS6 88 aa10.09□□□□□ -0.79
NFKB1-202ENST00000394820 PRR9Q5T870 116 aa10.09□□□□□ -0.79
NFKB1-202ENST00000394820 VPS13CQ709C8 3753 aa10.09□□□□□ -0.79
NFKB1-202ENST00000394820 RBAKDNA6NC62 111 aa10.09□□□□□ -0.79
NFKB1-202ENST00000394820 GAGE2BQ13066 116 aa10.09□□□□□ -0.79
NFKB1-202ENST00000394820 GAGE2EQ4V326 116 aa10.09□□□□□ -0.79
NFKB1-202ENST00000394820 SPANXB1Q9NS25 103 aaPredicted RBP10.09□□□□□ -0.79
NFKB1-202ENST00000394820 GAGE2DQ9UEU5 116 aa10.09□□□□□ -0.79
NFKB1-202ENST00000394820 SYNJ2BPP57105 145 aa10.08□□□□□ -0.8
NFKB1-202ENST00000394820 GATD1Q8NB37 220 aa10.08□□□□□ -0.8
NFKB1-202ENST00000394820 C11orf71Q6IPW1 123 aa10.08□□□□□ -0.8
NFKB1-202ENST00000394820 TNFRSF18Q9Y5U5 241 aa10.08□□□□□ -0.8
NFKB1-202ENST00000394820 A0A0J9YXV3 536 aa10.07□□□□□ -0.8
NFKB1-202ENST00000394820 ITLN2Q8WWU7 325 aaPredicted RBP10.07□□□□□ -0.8
NFKB1-202ENST00000394820 BAALCQ8WXS3 180 aa10.07□□□□□ -0.8
NFKB1-202ENST00000394820 A4D1N5 150 aa10.07□□□□□ -0.8
NFKB1-202ENST00000394820 COX6CP09669 75 aa10.07□□□□□ -0.8
NFKB1-202ENST00000394820 ZFAND6Q6FIF0 208 aa10.07□□□□□ -0.8
NFKB1-202ENST00000394820 FAM110DQ8TAY7 271 aaPredicted RBP10.07□□□□□ -0.8
NFKB1-202ENST00000394820 A0A1W2PRX2 142 aa10.06□□□□□ -0.8
NFKB1-202ENST00000394820 CRYBA4P53673 196 aa10.06□□□□□ -0.8
NFKB1-202ENST00000394820 C9orf139Q6ZV77 190 aa10.06□□□□□ -0.8
NFKB1-202ENST00000394820 NPBQ8NG41 125 aa10.06□□□□□ -0.8
NFKB1-202ENST00000394820 CCDC140Q96MF4 163 aa10.06□□□□□ -0.8
NFKB1-202ENST00000394820 J3QQQ9 107 aa10.06□□□□□ -0.8
NFKB1-202ENST00000394820 ODF3BA8MYP8 253 aa10.05□□□□□ -0.8
NFKB1-202ENST00000394820 FOXI1Q12951 378 aa10.05□□□□□ -0.8
NFKB1-202ENST00000394820 C20orf173Q96LM9 149 aa10.05□□□□□ -0.8
NFKB1-202ENST00000394820 CCL19Q99731 98 aa10.05□□□□□ -0.8
NFKB1-202ENST00000394820 ZANQ9Y493 2812 aa10.05□□□□□ -0.8
NFKB1-202ENST00000394820 E9PLD3 99 aa10.05□□□□□ -0.8
NFKB1-202ENST00000394820 VCYO14598 125 aa10.05□□□□□ -0.8
NFKB1-202ENST00000394820 SNRPD3P62318 126 aaKnown RBP10.05□□□□□ -0.8
NFKB1-202ENST00000394820 SLC25A20O43772 301 aa10.05□□□□□ -0.8
NFKB1-202ENST00000394820 TSPAN13O95857 204 aa10.05□□□□□ -0.8
NFKB1-202ENST00000394820 EDN2P20800 178 aa10.05□□□□□ -0.8
NFKB1-202ENST00000394820 PMVKQ15126 192 aa10.05□□□□□ -0.8
NFKB1-202ENST00000394820 LINC01559Q495D7 138 aa10.05□□□□□ -0.8
NFKB1-202ENST00000394820 CELSR2Q9HCU4 2923 aa10.05□□□□□ -0.8
NFKB1-202ENST00000394820 P0DMU3 169 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 FAM231AP0DMU4 169 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 FAM231CP0DMU5 169 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 C2orf82Q6UX34 121 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 RASL10AQ92737 203 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 PRO1854Q9UHT4 67 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 ITPR1Q14643 2758 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 IGHV4-61A0A0C4DH41 118 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 UBE2E1P51965 193 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 MINOS1Q5TGZ0 78 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 Q6ZS46 218 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 MINOS1-NBL1R4GNA1 71 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 A8MZ25 164 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 UBE2E2Q96LR5 201 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 SIRPDQ9H106 197 aa10.04□□□□□ -0.8
NFKB1-202ENST00000394820 C11orf68Q9H3H3 251 aaKnown RBP10.04□□□□□ -0.8
NFKB1-202ENST00000394820 TRAV13-1A0A0B4J241 112 aa10.03□□□□□ -0.8
NFKB1-202ENST00000394820 OVOL1O14753 267 aa10.03□□□□□ -0.8
NFKB1-202ENST00000394820 TCL1BO95988 128 aa10.03□□□□□ -0.8
NFKB1-202ENST00000394820 ANKRD29Q8N6D5 301 aa10.03□□□□□ -0.8
NFKB1-202ENST00000394820 MDFICQ9P1T7 246 aa10.03□□□□□ -0.8
NFKB1-202ENST00000394820 CFAP46Q8IYW2 2715 aa10.03□□□□□ -0.8
NFKB1-202ENST00000394820 DOPEY1Q5JWR5 2465 aa10.03□□□□□ -0.8
NFKB1-202ENST00000394820 TRBV7-1A0A0A6YYK4 115 aa10.03□□□□□ -0.8
NFKB1-202ENST00000394820 CENPVL3A0A0U1RRI6 287 aa10.03□□□□□ -0.8
NFKB1-202ENST00000394820 MRPS12O15235 138 aaKnown RBP10.03□□□□□ -0.8
NFKB1-202ENST00000394820 IGHV4-38-2P0DP08 117 aa10.03□□□□□ -0.8
NFKB1-202ENST00000394820 LMO4P61968 165 aa10.03□□□□□ -0.8
NFKB1-202ENST00000394820 RNF183Q96D59 192 aa10.03□□□□□ -0.8
NFKB1-202ENST00000394820 MOB4Q9Y3A3 225 aa10.03□□□□□ -0.8
NFKB1-202ENST00000394820 F8W735 103 aaPredicted RBP10.02□□□□□ -0.8
NFKB1-202ENST00000394820 PRB1P04280 392 aa10.02□□□□□ -0.8
NFKB1-202ENST00000394820 PPDPFLQ8WWR9 84 aa10.02□□□□□ -0.8
NFKB1-202ENST00000394820 LINC01587Q99440 93 aa10.02□□□□□ -0.8
NFKB1-202ENST00000394820 SUMO4Q6EEV6 95 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms