RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 C4orf3Q8WVX3 66 aa8.27□□□□□ -1.09
TCOF1-203ENST00000394269 FAM19A4Q96LR4 140 aa8.27□□□□□ -1.09
TCOF1-203ENST00000394269 LAMTOR2Q9Y2Q5 125 aa8.27□□□□□ -1.09
TCOF1-203ENST00000394269 CD5LO43866 347 aa8.27□□□□□ -1.09
TCOF1-203ENST00000394269 ZNF56Q15929 161 aa8.27□□□□□ -1.09
TCOF1-203ENST00000394269 NRACQ8N912 160 aa8.27□□□□□ -1.09
TCOF1-203ENST00000394269 RAX2Q96IS3 184 aa8.27□□□□□ -1.09
TCOF1-203ENST00000394269 CCL24O00175 119 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 FCER1GP30273 86 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 LAGE3Q14657 143 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 ZNF876PQ49A33 203 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 LINC01545Q5VT33 79 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 SAMD13Q5VXD3 122 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 Q8N8P6 123 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 TMEM160Q9NX00 188 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 SUMO2P61956 95 aaKnown RBP8.26□□□□□ -1.09
TCOF1-203ENST00000394269 RASL10AQ92737 203 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 ZNF256Q9Y2P7 627 aaPredicted RBP8.26□□□□□ -1.09
TCOF1-203ENST00000394269 IGHV1OR15-1A0A075B7D0 117 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 SLC25A34Q6PIV7 304 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 ERASQ7Z444 233 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 LINC01006Q8NI28 216 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 CSTL1Q9H114 145 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 XCL2Q9UBD3 114 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 AKAP9Q99996 3911 aa8.26□□□□□ -1.09
TCOF1-203ENST00000394269 DUSP14O95147 198 aaKnown RBP8.25□□□□□ -1.09
TCOF1-203ENST00000394269 Q8N2B8 174 aa8.25□□□□□ -1.09
TCOF1-203ENST00000394269 KRTAP1-1Q07627 177 aa8.25□□□□□ -1.09
TCOF1-203ENST00000394269 ANKRD39Q53RE8 183 aa8.25□□□□□ -1.09
TCOF1-203ENST00000394269 FOXI2Q6ZQN5 318 aa8.25□□□□□ -1.09
TCOF1-203ENST00000394269 ZNF418Q8TF45 676 aaPredicted RBP8.25□□□□□ -1.09
TCOF1-203ENST00000394269 LINC01587Q99440 93 aa8.25□□□□□ -1.09
TCOF1-203ENST00000394269 NBEAL2Q6ZNJ1 2754 aa8.25□□□□□ -1.09
TCOF1-203ENST00000394269 NSD1Q96L73 2696 aaPredicted RBP8.25□□□□□ -1.09
TCOF1-203ENST00000394269 TEX29Q8N6K0 151 aa8.25□□□□□ -1.09
TCOF1-203ENST00000394269 SAP30O75446 220 aa8.24□□□□□ -1.09
TCOF1-203ENST00000394269 DEFB114Q30KQ6 69 aa8.24□□□□□ -1.09
TCOF1-203ENST00000394269 MPV17L2Q567V2 206 aa8.24□□□□□ -1.09
TCOF1-203ENST00000394269 RNF152Q8N8N0 203 aa8.24□□□□□ -1.09
TCOF1-203ENST00000394269 SMIM2Q9BVW6 85 aa8.24□□□□□ -1.09
TCOF1-203ENST00000394269 TTTY13Q9BZ97 58 aa8.24□□□□□ -1.09
TCOF1-203ENST00000394269 IGHV4-4A0A075B6R2 117 aa8.24□□□□□ -1.09
TCOF1-203ENST00000394269 ST20Q9HBF5 79 aa8.24□□□□□ -1.09
TCOF1-203ENST00000394269 MRAP2Q96G30 205 aa8.23□□□□□ -1.09
TCOF1-203ENST00000394269 IGHV3-16A0A0C4DH30 117 aa8.23□□□□□ -1.09
TCOF1-203ENST00000394269 RBMY1A1P0DJD3 496 aaKnown RBP8.23□□□□□ -1.09
TCOF1-203ENST00000394269 RBMY1CP0DJD4 496 aa8.23□□□□□ -1.09
TCOF1-203ENST00000394269 RBMY1FQ15415 496 aaKnown RBP8.23□□□□□ -1.09
TCOF1-203ENST00000394269 SCGB3A1Q96QR1 104 aa8.23□□□□□ -1.09
TCOF1-203ENST00000394269 CBY1Q9Y3M2 126 aa8.23□□□□□ -1.09
TCOF1-203ENST00000394269 H3BMM0 161 aa8.23□□□□□ -1.09
TCOF1-203ENST00000394269 GTSCR1Q86UQ5 136 aa8.23□□□□□ -1.09
TCOF1-203ENST00000394269 EMP1P54849 157 aa8.22□□□□□ -1.09
TCOF1-203ENST00000394269 SUMO4Q6EEV6 95 aa8.22□□□□□ -1.09
TCOF1-203ENST00000394269 TMEM86BQ8N661 226 aa8.22□□□□□ -1.09
TCOF1-203ENST00000394269 MAP6D1Q9H9H5 199 aa8.22□□□□□ -1.09
TCOF1-203ENST00000394269 SCRT2Q9NQ03 307 aa8.22□□□□□ -1.09
TCOF1-203ENST00000394269 IGLV2-18A0A075B6J9 118 aa8.22□□□□□ -1.09
TCOF1-203ENST00000394269 TRBV7-9A0A0J9YWB2 115 aa8.22□□□□□ -1.09
TCOF1-203ENST00000394269 PCP2Q8IVA1 136 aa8.22□□□□□ -1.09
TCOF1-203ENST00000394269 SYT8Q8NBV8 401 aa8.22□□□□□ -1.09
TCOF1-203ENST00000394269 RBMY1BA6NDE4 496 aaKnown RBP8.21□□□□□ -1.09
TCOF1-203ENST00000394269 RBMY1EA6NEQ0 496 aaKnown RBP8.21□□□□□ -1.09
TCOF1-203ENST00000394269 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.21□□□□□ -1.09
TCOF1-203ENST00000394269 RBMY1DP0C7P1 496 aaKnown RBP8.21□□□□□ -1.09
TCOF1-203ENST00000394269 PROK1P58294 105 aa8.21□□□□□ -1.09
TCOF1-203ENST00000394269 COL5A1-AS1Q5SY13 56 aa8.21□□□□□ -1.09
TCOF1-203ENST00000394269 AMTNQ6UX39 209 aa8.21□□□□□ -1.09
TCOF1-203ENST00000394269 MRPL35Q9NZE8 188 aaKnown RBP8.21□□□□□ -1.09
TCOF1-203ENST00000394269 LGALS9BQ3B8N2 356 aa8.21□□□□□ -1.1
TCOF1-203ENST00000394269 ZC2HC1BQ5TFG8 222 aa8.21□□□□□ -1.1
TCOF1-203ENST00000394269 LGALS9CQ6DKI2 356 aa8.21□□□□□ -1.1
TCOF1-203ENST00000394269 STHQ8IWL8 128 aa8.21□□□□□ -1.1
TCOF1-203ENST00000394269 WFDC10AQ9H1F0 79 aa8.21□□□□□ -1.1
TCOF1-203ENST00000394269 LY6G6DO95868 133 aa8.2□□□□□ -1.1
TCOF1-203ENST00000394269 C2orf66Q6UXQ4 117 aa8.2□□□□□ -1.1
TCOF1-203ENST00000394269 SDHAF1A6NFY7 115 aa8.2□□□□□ -1.1
TCOF1-203ENST00000394269 CCL25O15444 150 aa8.2□□□□□ -1.1
TCOF1-203ENST00000394269 P0DMU3 169 aa8.2□□□□□ -1.1
TCOF1-203ENST00000394269 FAM231AP0DMU4 169 aa8.2□□□□□ -1.1
TCOF1-203ENST00000394269 FAM231CP0DMU5 169 aa8.2□□□□□ -1.1
TCOF1-203ENST00000394269 HLA-DRB4P13762 266 aa8.2□□□□□ -1.1
TCOF1-203ENST00000394269 GAGE1Q13065 139 aa8.2□□□□□ -1.1
TCOF1-203ENST00000394269 TSSC4Q9Y5U2 329 aaPredicted RBP8.2□□□□□ -1.1
TCOF1-203ENST00000394269 HLA-DRB4X5D2U9 266 aa8.2□□□□□ -1.1
TCOF1-203ENST00000394269 TRAV8-6A0A0B4J262 113 aa8.2□□□□□ -1.1
TCOF1-203ENST00000394269 RPL39P62891 51 aaKnown RBP8.2□□□□□ -1.1
TCOF1-203ENST00000394269 TENM1Q9UKZ4 2725 aa8.2□□□□□ -1.1
TCOF1-203ENST00000394269 ATP5LO75964 103 aa8.19□□□□□ -1.1
TCOF1-203ENST00000394269 RPL35AP18077 110 aaKnown RBP8.19□□□□□ -1.1
TCOF1-203ENST00000394269 VWFP04275 2813 aa8.19□□□□□ -1.1
TCOF1-203ENST00000394269 IGKCP01834 107 aa8.19□□□□□ -1.1
TCOF1-203ENST00000394269 KIR2DL4Q99706 377 aa8.19□□□□□ -1.1
TCOF1-203ENST00000394269 OR11H12B2RN74 326 aa8.19□□□□□ -1.1
TCOF1-203ENST00000394269 LINC00315P59091 139 aa8.19□□□□□ -1.1
TCOF1-203ENST00000394269 ORMDL2Q53FV1 153 aa8.19□□□□□ -1.1
TCOF1-203ENST00000394269 MRPL52Q86TS9 123 aaKnown RBP8.18□□□□□ -1.1
TCOF1-203ENST00000394269 MRPL16Q9NX20 251 aaKnown RBP8.18□□□□□ -1.1
TCOF1-203ENST00000394269 MRPS16Q9Y3D3 137 aaKnown RBP8.18□□□□□ -1.1
TCOF1-203ENST00000394269 KIF25-AS1Q9Y6Z4 181 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms