RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.24■□□□□ 0.19
HMGA2-203ENST00000393578 KIR2DL5BA0A0G2JN68 375 aa16.23■□□□□ 0.19
HMGA2-203ENST00000393578 KIR2DL5BA0A0G2JPC4 375 aa16.23■□□□□ 0.19
HMGA2-203ENST00000393578 ZNF876PQ49A33 203 aa16.23■□□□□ 0.19
HMGA2-203ENST00000393578 PET117Q6UWS5 81 aa16.23■□□□□ 0.19
HMGA2-203ENST00000393578 KIR2DL5AQ8N109 375 aa16.23■□□□□ 0.19
HMGA2-203ENST00000393578 LINC01587Q99440 93 aa16.23■□□□□ 0.19
HMGA2-203ENST00000393578 SPATA12Q7Z6I5 190 aa16.22■□□□□ 0.19
HMGA2-203ENST00000393578 A0A087WWL8 130 aa16.22■□□□□ 0.19
HMGA2-203ENST00000393578 C20orf202A1L168 122 aa16.22■□□□□ 0.19
HMGA2-203ENST00000393578 SUMO2P61956 95 aaKnown RBP16.22■□□□□ 0.19
HMGA2-203ENST00000393578 XCL2Q9UBD3 114 aa16.22■□□□□ 0.19
HMGA2-203ENST00000393578 DDTP30046 118 aa16.21■□□□□ 0.19
HMGA2-203ENST00000393578 FCER1GP30273 86 aa16.21■□□□□ 0.19
HMGA2-203ENST00000393578 RPL39LQ96EH5 51 aaKnown RBP16.21■□□□□ 0.19
HMGA2-203ENST00000393578 SMIM2Q9BVW6 85 aa16.21■□□□□ 0.19
HMGA2-203ENST00000393578 C19orf73Q9NVV2 129 aa16.21■□□□□ 0.19
HMGA2-203ENST00000393578 PAM16Q9Y3D7 125 aa16.21■□□□□ 0.19
HMGA2-203ENST00000393578 ZNF415Q09FC8 603 aa16.2■□□□□ 0.18
HMGA2-203ENST00000393578 CITED1Q99966 193 aa16.2■□□□□ 0.18
HMGA2-203ENST00000393578 F8P00451 2351 aa16.2■□□□□ 0.18
HMGA2-203ENST00000393578 CRYGDP07320 174 aa16.19■□□□□ 0.18
HMGA2-203ENST00000393578 LAGE3Q14657 143 aa16.19■□□□□ 0.18
HMGA2-203ENST00000393578 PIK3CD-AS1Q5SR53 167 aa16.18■□□□□ 0.18
HMGA2-203ENST00000393578 SUMO4Q6EEV6 95 aa16.18■□□□□ 0.18
HMGA2-203ENST00000393578 F5H697 171 aa16.18■□□□□ 0.18
HMGA2-203ENST00000393578 FAM74A4Q5TZK3 123 aa16.18■□□□□ 0.18
HMGA2-203ENST00000393578 ATOH7Q8N100 152 aa16.18■□□□□ 0.18
HMGA2-203ENST00000393578 K7EMI3 77 aa16.17■□□□□ 0.18
HMGA2-203ENST00000393578 PRM2P04554 102 aa16.17■□□□□ 0.18
HMGA2-203ENST00000393578 INSL3P51460 131 aa16.17■□□□□ 0.18
HMGA2-203ENST00000393578 PTH2Q96A98 100 aa16.17■□□□□ 0.18
HMGA2-203ENST00000393578 M0R2P5 195 aa16.17■□□□□ 0.18
HMGA2-203ENST00000393578 LINC01545Q5VT33 79 aa16.17■□□□□ 0.18
HMGA2-203ENST00000393578 C11orf72Q8NBR9 251 aa16.17■□□□□ 0.18
HMGA2-203ENST00000393578 TMEM158Q8WZ71 300 aa16.17■□□□□ 0.18
HMGA2-203ENST00000393578 TMEM208Q9BTX3 173 aa16.17■□□□□ 0.18
HMGA2-203ENST00000393578 TCAPO15273 167 aa16.16■□□□□ 0.18
HMGA2-203ENST00000393578 C1orf158Q8N1D5 194 aa16.16■□□□□ 0.18
HMGA2-203ENST00000393578 IFI27L1Q96BM0 104 aa16.16■□□□□ 0.18
HMGA2-203ENST00000393578 TRAV9-2A0A087WT02 112 aa16.15■□□□□ 0.18
HMGA2-203ENST00000393578 H0Y8G0 127 aa16.15■□□□□ 0.18
HMGA2-203ENST00000393578 RPL32P62910 135 aaKnown RBP16.15■□□□□ 0.18
HMGA2-203ENST00000393578 SPATA45Q537H7 98 aa16.15■□□□□ 0.18
HMGA2-203ENST00000393578 WFDC10AQ9H1F0 79 aa16.15■□□□□ 0.18
HMGA2-203ENST00000393578 SPXQ9BT56 116 aa16.15■□□□□ 0.18
HMGA2-203ENST00000393578 ST20Q9HBF5 79 aa16.15■□□□□ 0.18
HMGA2-203ENST00000393578 ZNF56Q15929 161 aa16.14■□□□□ 0.17
HMGA2-203ENST00000393578 ZNF705AQ6ZN79 300 aaPredicted RBP16.14■□□□□ 0.17
HMGA2-203ENST00000393578 ORMDL2Q53FV1 153 aa16.13■□□□□ 0.17
HMGA2-203ENST00000393578 TENM1Q9UKZ4 2725 aa16.13■□□□□ 0.17
HMGA2-203ENST00000393578 C9orf66Q5T8R8 295 aa16.13■□□□□ 0.17
HMGA2-203ENST00000393578 CSTL1Q9H114 145 aa16.13■□□□□ 0.17
HMGA2-203ENST00000393578 JMJD1CQ15652 2540 aa16.13■□□□□ 0.17
HMGA2-203ENST00000393578 A8MWV9 139 aa16.12■□□□□ 0.17
HMGA2-203ENST00000393578 M0QY20 66 aa16.12■□□□□ 0.17
HMGA2-203ENST00000393578 GIG44P09565 113 aaPredicted RBP16.12■□□□□ 0.17
HMGA2-203ENST00000393578 MCRIP2Q9BUT9 160 aaKnown RBP16.12■□□□□ 0.17
HMGA2-203ENST00000393578 TRBV6-5A0A0K0K1A5 114 aa16.11■□□□□ 0.17
HMGA2-203ENST00000393578 DEFA6Q01524 100 aa16.11■□□□□ 0.17
HMGA2-203ENST00000393578 MAJINQ3KP22 176 aa16.11■□□□□ 0.17
HMGA2-203ENST00000393578 NDUFAF3Q9BU61 184 aa16.11■□□□□ 0.17
HMGA2-203ENST00000393578 IGHV3OR16-12A0A075B7B8 117 aa16.11■□□□□ 0.17
HMGA2-203ENST00000393578 NUDT3O95989 172 aa16.11■□□□□ 0.17
HMGA2-203ENST00000393578 POLR2KP53803 58 aaKnown RBP16.11■□□□□ 0.17
HMGA2-203ENST00000393578 C18orf15Q96N68 181 aa16.11■□□□□ 0.17
HMGA2-203ENST00000393578 C1QTNF4Q9BXJ3 329 aa16.11■□□□□ 0.17
HMGA2-203ENST00000393578 RPL35AP18077 110 aaKnown RBP16.1■□□□□ 0.17
HMGA2-203ENST00000393578 AZU1P20160 251 aa16.1■□□□□ 0.17
HMGA2-203ENST00000393578 LGALS9BQ3B8N2 356 aa16.1■□□□□ 0.17
HMGA2-203ENST00000393578 LGALS9CQ6DKI2 356 aa16.1■□□□□ 0.17
HMGA2-203ENST00000393578 MORN3Q6PF18 240 aaPredicted RBP16.1■□□□□ 0.17
HMGA2-203ENST00000393578 MIEN1Q9BRT3 115 aa16.1■□□□□ 0.17
HMGA2-203ENST00000393578 ATP5LO75964 103 aa16.09■□□□□ 0.17
HMGA2-203ENST00000393578 GOLT1BQ9Y3E0 138 aa16.09■□□□□ 0.17
HMGA2-203ENST00000393578 TEP1Q99973 2627 aaKnown RBP16.09■□□□□ 0.17
HMGA2-203ENST00000393578 VCYO14598 125 aa16.08■□□□□ 0.16
HMGA2-203ENST00000393578 GTSCR1Q86UQ5 136 aa16.08■□□□□ 0.16
HMGA2-203ENST00000393578 SPATA3Q8NHX4 192 aa16.08■□□□□ 0.16
HMGA2-203ENST00000393578 PMCHL2Q9BQD1 86 aa16.08■□□□□ 0.16
HMGA2-203ENST00000393578 EDA2RQ9HAV5 297 aa16.08■□□□□ 0.16
HMGA2-203ENST00000393578 BAHCC1Q9P281 2608 aa16.08■□□□□ 0.16
HMGA2-203ENST00000393578 ATRQ13535 2644 aa16.08■□□□□ 0.16
HMGA2-203ENST00000393578 CYSRT1A8MQ03 144 aa16.07■□□□□ 0.16
HMGA2-203ENST00000393578 UFSP1Q6NVU6 142 aa16.07■□□□□ 0.16
HMGA2-203ENST00000393578 RNASE8Q8TDE3 154 aaKnown RBP16.07■□□□□ 0.16
HMGA2-203ENST00000393578 VWFP04275 2813 aa16.07■□□□□ 0.16
HMGA2-203ENST00000393578 SDHAF1A6NFY7 115 aa16.07■□□□□ 0.16
HMGA2-203ENST00000393578 H7C1H1 209 aa16.07■□□□□ 0.16
HMGA2-203ENST00000393578 IGLL1P15814 213 aa16.07■□□□□ 0.16
HMGA2-203ENST00000393578 IL17DQ8TAD2 202 aa16.07■□□□□ 0.16
HMGA2-203ENST00000393578 TRBV27A0A0K0K1C4 114 aa16.06■□□□□ 0.16
HMGA2-203ENST00000393578 CFAP126Q5VTH2 177 aa16.06■□□□□ 0.16
HMGA2-203ENST00000393578 TMEM263Q8WUH6 116 aaKnown RBP16.06■□□□□ 0.16
HMGA2-203ENST00000393578 C14orf144Q96I85 54 aa16.06■□□□□ 0.16
HMGA2-203ENST00000393578 IGLC3P0DOY3 106 aa16.06■□□□□ 0.16
HMGA2-203ENST00000393578 TOMM6Q96B49 74 aa16.06■□□□□ 0.16
HMGA2-203ENST00000393578 KIR2DL4Q99706 377 aa16.06■□□□□ 0.16
HMGA2-203ENST00000393578 MRPL16Q9NX20 251 aaKnown RBP16.06■□□□□ 0.16
HMGA2-203ENST00000393578 HSBP1L1C9JCN9 74 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms