RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 FHL3Q13643 280 aa10.54□□□□□ -0.72
MKS1-203ENST00000393120 DYNLRB2Q8TF09 96 aa10.54□□□□□ -0.72
MKS1-203ENST00000393120 DUX3Q96PT4 197 aa10.54□□□□□ -0.72
MKS1-203ENST00000393120 SCGB3A1Q96QR1 104 aa10.54□□□□□ -0.72
MKS1-203ENST00000393120 TEX15Q9BXT5 2789 aa10.54□□□□□ -0.72
MKS1-203ENST00000393120 A0A087WWL8 130 aa10.54□□□□□ -0.72
MKS1-203ENST00000393120 TRAV25A0A0B4J276 109 aa10.54□□□□□ -0.72
MKS1-203ENST00000393120 VCYO14598 125 aa10.54□□□□□ -0.72
MKS1-203ENST00000393120 CLUHP3Q96NS8 147 aa10.54□□□□□ -0.72
MKS1-203ENST00000393120 SPAG8Q99932 426 aaPredicted RBP10.54□□□□□ -0.72
MKS1-203ENST00000393120 C16orf95Q9H693 158 aa10.54□□□□□ -0.72
MKS1-203ENST00000393120 ZNF256Q9Y2P7 627 aaPredicted RBP10.54□□□□□ -0.72
MKS1-203ENST00000393120 H7C1H1 209 aa10.53□□□□□ -0.72
MKS1-203ENST00000393120 PLNP26678 52 aa10.53□□□□□ -0.72
MKS1-203ENST00000393120 C2orf66Q6UXQ4 117 aa10.53□□□□□ -0.72
MKS1-203ENST00000393120 RAX2Q96IS3 184 aa10.53□□□□□ -0.72
MKS1-203ENST00000393120 MRPL35Q9NZE8 188 aaKnown RBP10.53□□□□□ -0.72
MKS1-203ENST00000393120 COX11Q9Y6N1 276 aa10.53□□□□□ -0.72
MKS1-203ENST00000393120 F5H697 171 aa10.52□□□□□ -0.72
MKS1-203ENST00000393120 RNASE1P07998 156 aaKnown RBP10.52□□□□□ -0.72
MKS1-203ENST00000393120 SCGB2A2Q13296 93 aa10.52□□□□□ -0.72
MKS1-203ENST00000393120 ERASQ7Z444 233 aa10.52□□□□□ -0.72
MKS1-203ENST00000393120 NEXN-AS1Q8NBZ9 246 aa10.52□□□□□ -0.72
MKS1-203ENST00000393120 LINC00467Q9BRT7 94 aa10.52□□□□□ -0.72
MKS1-203ENST00000393120 MAP6D1Q9H9H5 199 aa10.52□□□□□ -0.72
MKS1-203ENST00000393120 YAE1D1Q9NRH1 226 aa10.52□□□□□ -0.72
MKS1-203ENST00000393120 TRBV27A0A0K0K1C4 114 aa10.52□□□□□ -0.73
MKS1-203ENST00000393120 F8VRH5 84 aa10.52□□□□□ -0.73
MKS1-203ENST00000393120 M0QY20 66 aa10.52□□□□□ -0.73
MKS1-203ENST00000393120 RBMY1A1P0DJD3 496 aaKnown RBP10.52□□□□□ -0.73
MKS1-203ENST00000393120 RBMY1CP0DJD4 496 aa10.52□□□□□ -0.73
MKS1-203ENST00000393120 RBMY1FQ15415 496 aaKnown RBP10.52□□□□□ -0.73
MKS1-203ENST00000393120 TMEM97Q5BJF2 176 aa10.52□□□□□ -0.73
MKS1-203ENST00000393120 PIK3CD-AS1Q5SR53 167 aa10.52□□□□□ -0.73
MKS1-203ENST00000393120 RBMY1BA6NDE4 496 aaKnown RBP10.51□□□□□ -0.73
MKS1-203ENST00000393120 RBMY1EA6NEQ0 496 aaKnown RBP10.51□□□□□ -0.73
MKS1-203ENST00000393120 CBY3A6NI87 242 aa10.51□□□□□ -0.73
MKS1-203ENST00000393120 RBMY1DP0C7P1 496 aaKnown RBP10.51□□□□□ -0.73
MKS1-203ENST00000393120 NMUP48645 174 aa10.51□□□□□ -0.73
MKS1-203ENST00000393120 CD300EQ496F6 205 aaPredicted RBP10.51□□□□□ -0.73
MKS1-203ENST00000393120 ZNF876PQ49A33 203 aa10.51□□□□□ -0.73
MKS1-203ENST00000393120 PCP2Q8IVA1 136 aa10.51□□□□□ -0.73
MKS1-203ENST00000393120 PTH2Q96A98 100 aa10.51□□□□□ -0.73
MKS1-203ENST00000393120 KIR2DL4Q99706 377 aa10.51□□□□□ -0.73
MKS1-203ENST00000393120 TMEM160Q9NX00 188 aa10.51□□□□□ -0.73
MKS1-203ENST00000393120 SEC11AP67812 179 aa10.5□□□□□ -0.73
MKS1-203ENST00000393120 ZC2HC1BQ5TFG8 222 aa10.5□□□□□ -0.73
MKS1-203ENST00000393120 JMJD8Q96S16 334 aa10.5□□□□□ -0.73
MKS1-203ENST00000393120 EDA2RQ9HAV5 297 aa10.5□□□□□ -0.73
MKS1-203ENST00000393120 CYSLTR1Q9Y271 337 aa10.5□□□□□ -0.73
MKS1-203ENST00000393120 SDHAF1A6NFY7 115 aa10.5□□□□□ -0.73
MKS1-203ENST00000393120 CCL24O00175 119 aa10.5□□□□□ -0.73
MKS1-203ENST00000393120 CD28P10747 220 aa10.5□□□□□ -0.73
MKS1-203ENST00000393120 ZFP2Q6ZN57 461 aa10.5□□□□□ -0.73
MKS1-203ENST00000393120 HIGD1BQ9P298 99 aa10.5□□□□□ -0.73
MKS1-203ENST00000393120 IGKV2D-26A0A0A0MRZ7 120 aa10.49□□□□□ -0.73
MKS1-203ENST00000393120 RIPPLY3P57055 190 aa10.49□□□□□ -0.73
MKS1-203ENST00000393120 HSD52Q0P140 79 aa10.49□□□□□ -0.73
MKS1-203ENST00000393120 FAM74A4Q5TZK3 123 aa10.49□□□□□ -0.73
MKS1-203ENST00000393120 TRPT1Q86TN4 253 aaKnown RBP10.49□□□□□ -0.73
MKS1-203ENST00000393120 BAALCQ8WXS3 180 aa10.49□□□□□ -0.73
MKS1-203ENST00000393120 CHTOPQ9Y3Y2 248 aaKnown RBP10.49□□□□□ -0.73
MKS1-203ENST00000393120 TSSC4Q9Y5U2 329 aaPredicted RBP10.49□□□□□ -0.73
MKS1-203ENST00000393120 ITPR3Q14573 2671 aa10.49□□□□□ -0.73
MKS1-203ENST00000393120 TAX1BP3O14907 124 aa10.48□□□□□ -0.73
MKS1-203ENST00000393120 ZNF56Q15929 161 aa10.48□□□□□ -0.73
MKS1-203ENST00000393120 GTSCR1Q86UQ5 136 aa10.48□□□□□ -0.73
MKS1-203ENST00000393120 LINC01006Q8NI28 216 aa10.48□□□□□ -0.73
MKS1-203ENST00000393120 IGIPA6NJ69 53 aa10.48□□□□□ -0.73
MKS1-203ENST00000393120 ZNF124Q15973 351 aa10.48□□□□□ -0.73
MKS1-203ENST00000393120 MORN3Q6PF18 240 aaPredicted RBP10.48□□□□□ -0.73
MKS1-203ENST00000393120 NEGR1Q7Z3B1 354 aa10.48□□□□□ -0.73
MKS1-203ENST00000393120 TMEM141Q96I45 108 aa10.48□□□□□ -0.73
MKS1-203ENST00000393120 NPSP0C0P6 89 aa10.47□□□□□ -0.73
MKS1-203ENST00000393120 TCTAP57738 103 aa10.47□□□□□ -0.73
MKS1-203ENST00000393120 RHOHQ15669 191 aa10.47□□□□□ -0.73
MKS1-203ENST00000393120 TIMM17AQ99595 171 aa10.47□□□□□ -0.73
MKS1-203ENST00000393120 AGRNO00468 2067 aa10.47□□□□□ -0.73
MKS1-203ENST00000393120 PRSS29PA6NIE9 313 aa10.46□□□□□ -0.73
MKS1-203ENST00000393120 CITED2Q99967 270 aaPredicted RBP10.46□□□□□ -0.73
MKS1-203ENST00000393120 KMT2BQ9UMN6 2715 aaPredicted RBP10.46□□□□□ -0.73
MKS1-203ENST00000393120 M0R2P5 195 aa10.46□□□□□ -0.74
MKS1-203ENST00000393120 TP53TG1Q9Y2A0 90 aa10.46□□□□□ -0.74
MKS1-203ENST00000393120 A8MWV9 139 aa10.45□□□□□ -0.74
MKS1-203ENST00000393120 INSP01308 110 aa10.45□□□□□ -0.74
MKS1-203ENST00000393120 HILS1P60008 231 aa10.45□□□□□ -0.74
MKS1-203ENST00000393120 ZNF415Q09FC8 603 aa10.45□□□□□ -0.74
MKS1-203ENST00000393120 NSUN5P1Q3KNT7 163 aa10.45□□□□□ -0.74
MKS1-203ENST00000393120 ODF3L2Q3SX64 289 aa10.45□□□□□ -0.74
MKS1-203ENST00000393120 HIST2H2BDQ6DRA6 164 aa10.45□□□□□ -0.74
MKS1-203ENST00000393120 UFSP1Q6NVU6 142 aa10.45□□□□□ -0.74
MKS1-203ENST00000393120 Q6ZVH6 145 aa10.45□□□□□ -0.74
MKS1-203ENST00000393120 ZNF418Q8TF45 676 aaPredicted RBP10.45□□□□□ -0.74
MKS1-203ENST00000393120 A0A1W2PRX2 142 aa10.45□□□□□ -0.74
MKS1-203ENST00000393120 A6NDN8 102 aa10.45□□□□□ -0.74
MKS1-203ENST00000393120 TSHBP01222 138 aa10.45□□□□□ -0.74
MKS1-203ENST00000393120 CMC4P56277 68 aaPredicted RBP10.45□□□□□ -0.74
MKS1-203ENST00000393120 C11orf44Q8N8P7 122 aa10.45□□□□□ -0.74
MKS1-203ENST00000393120 PDZD2O15018 2839 aa10.44□□□□□ -0.74
MKS1-203ENST00000393120 NDUFA7O95182 113 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms