RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 AKAP13Q12802 2813 aa12.54□□□□□ -0.4
SNX9-201ENST00000392185 CHAC1Q9BUX1 264 aa12.54□□□□□ -0.4
SNX9-201ENST00000392185 A0A0J9YX75 114 aa12.54□□□□□ -0.4
SNX9-201ENST00000392185 KIR3DS1Q14943 382 aa12.54□□□□□ -0.4
SNX9-201ENST00000392185 COA6Q5JTJ3 125 aaKnown RBP12.54□□□□□ -0.4
SNX9-201ENST00000392185 C4orf3Q8WVX3 66 aa12.54□□□□□ -0.4
SNX9-201ENST00000392185 DKK2Q9UBU2 259 aa12.54□□□□□ -0.4
SNX9-201ENST00000392185 SPCS1Q9Y6A9 102 aa12.54□□□□□ -0.4
SNX9-201ENST00000392185 MRAPQ8TCY5 172 aa12.53□□□□□ -0.4
SNX9-201ENST00000392185 MLST8Q9BVC4 326 aa12.53□□□□□ -0.4
SNX9-201ENST00000392185 MDFICQ9P1T7 246 aa12.53□□□□□ -0.4
SNX9-201ENST00000392185 DNAH14Q0VDD8 3507 aa12.53□□□□□ -0.4
SNX9-201ENST00000392185 SMAD5-AS1Q9Y6J3 95 aa12.53□□□□□ -0.4
SNX9-201ENST00000392185 CIDEAO60543 219 aa12.53□□□□□ -0.4
SNX9-201ENST00000392185 GAGE6Q13070 117 aa12.53□□□□□ -0.4
SNX9-201ENST00000392185 K7ERU9 68 aa12.52□□□□□ -0.4
SNX9-201ENST00000392185 TMEM86BQ8N661 226 aa12.52□□□□□ -0.4
SNX9-201ENST00000392185 HSD52Q0P140 79 aa12.52□□□□□ -0.41
SNX9-201ENST00000392185 ESM1Q9NQ30 184 aa12.52□□□□□ -0.41
SNX9-201ENST00000392185 HELZ2Q9BYK8 2649 aaKnown RBP12.52□□□□□ -0.41
SNX9-201ENST00000392185 A0A0J9YY99 117 aa12.52□□□□□ -0.41
SNX9-201ENST00000392185 APOC4P55056 127 aa12.52□□□□□ -0.41
SNX9-201ENST00000392185 LINC00158P58513 81 aa12.52□□□□□ -0.41
SNX9-201ENST00000392185 ZNF747Q9BV97 191 aa12.52□□□□□ -0.41
SNX9-201ENST00000392185 USP24Q9UPU5 2620 aa12.52□□□□□ -0.41
SNX9-201ENST00000392185 CD5LO43866 347 aa12.51□□□□□ -0.41
SNX9-201ENST00000392185 HLA-DRB4P13762 266 aa12.51□□□□□ -0.41
SNX9-201ENST00000392185 HLA-DRB4X5D2U9 266 aa12.51□□□□□ -0.41
SNX9-201ENST00000392185 ZNF124Q15973 351 aa12.51□□□□□ -0.41
SNX9-201ENST00000392185 C18orf65Q6ZTR6 163 aa12.51□□□□□ -0.41
SNX9-201ENST00000392185 C20orf173Q96LM9 149 aa12.51□□□□□ -0.41
SNX9-201ENST00000392185 IGLC3P0DOY3 106 aa12.51□□□□□ -0.41
SNX9-201ENST00000392185 COPS9Q8WXC6 57 aa12.51□□□□□ -0.41
SNX9-201ENST00000392185 EREGO14944 169 aa12.5□□□□□ -0.41
SNX9-201ENST00000392185 PMVKQ15126 192 aa12.5□□□□□ -0.41
SNX9-201ENST00000392185 EYSQ5T1H1 3165 aa12.5□□□□□ -0.41
SNX9-201ENST00000392185 DEFB4AO15263 64 aa12.5□□□□□ -0.41
SNX9-201ENST00000392185 PIFOQ8TCI5 191 aa12.5□□□□□ -0.41
SNX9-201ENST00000392185 TRBV7-9A0A0J9YWB2 115 aa12.5□□□□□ -0.41
SNX9-201ENST00000392185 C9orf66Q5T8R8 295 aa12.5□□□□□ -0.41
SNX9-201ENST00000392185 C20orf144Q9BQM9 153 aa12.5□□□□□ -0.41
SNX9-201ENST00000392185 C20orf78Q9BR46 151 aa12.5□□□□□ -0.41
SNX9-201ENST00000392185 TIMM21Q9BVV7 248 aa12.5□□□□□ -0.41
SNX9-201ENST00000392185 TDRG1Q3Y452 100 aa12.49□□□□□ -0.41
SNX9-201ENST00000392185 LY6G6DO95868 133 aa12.49□□□□□ -0.41
SNX9-201ENST00000392185 MYCNOSP40205 109 aa12.49□□□□□ -0.41
SNX9-201ENST00000392185 KLF5Q13887 457 aaPredicted RBP12.49□□□□□ -0.41
SNX9-201ENST00000392185 C6orf226Q5I0X4 101 aa12.49□□□□□ -0.41
SNX9-201ENST00000392185 SUMO4Q6EEV6 95 aa12.49□□□□□ -0.41
SNX9-201ENST00000392185 ZNF702PQ9H963 129 aa12.49□□□□□ -0.41
SNX9-201ENST00000392185 VWC2LB2RUY7 222 aa12.49□□□□□ -0.41
SNX9-201ENST00000392185 PSMB8P28062 276 aa12.49□□□□□ -0.41
SNX9-201ENST00000392185 TRBV25-1A0A075B6N4 114 aa12.48□□□□□ -0.41
SNX9-201ENST00000392185 ESDP10768 282 aa12.48□□□□□ -0.41
SNX9-201ENST00000392185 K7EQG2 157 aa12.48□□□□□ -0.41
SNX9-201ENST00000392185 GDF5OSQ5U4N7 250 aa12.48□□□□□ -0.41
SNX9-201ENST00000392185 PRIMA1Q86XR5 153 aa12.48□□□□□ -0.41
SNX9-201ENST00000392185 PLEKHB2Q96CS7 222 aa12.48□□□□□ -0.41
SNX9-201ENST00000392185 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.48□□□□□ -0.41
SNX9-201ENST00000392185 IGKV2-29A2NJV5 120 aaPredicted RBP12.48□□□□□ -0.41
SNX9-201ENST00000392185 TET2Q6N021 2002 aaPredicted RBP12.48□□□□□ -0.41
SNX9-201ENST00000392185 CRIP1P50238 77 aa12.48□□□□□ -0.41
SNX9-201ENST00000392185 SEC11AP67812 179 aa12.48□□□□□ -0.41
SNX9-201ENST00000392185 F8VRH5 84 aa12.47□□□□□ -0.41
SNX9-201ENST00000392185 CTRLP40313 264 aa12.47□□□□□ -0.41
SNX9-201ENST00000392185 PAX2Q02962 417 aa12.47□□□□□ -0.41
SNX9-201ENST00000392185 TMEM243Q9BU79 118 aa12.47□□□□□ -0.41
SNX9-201ENST00000392185 MAP6D1Q9H9H5 199 aa12.47□□□□□ -0.41
SNX9-201ENST00000392185 DNAL4O96015 105 aa12.47□□□□□ -0.41
SNX9-201ENST00000392185 CKS1BP61024 79 aa12.47□□□□□ -0.41
SNX9-201ENST00000392185 LGALS9BQ3B8N2 356 aa12.47□□□□□ -0.41
SNX9-201ENST00000392185 LGALS9CQ6DKI2 356 aa12.47□□□□□ -0.41
SNX9-201ENST00000392185 ZNF493Q6ZR52 646 aa12.47□□□□□ -0.41
SNX9-201ENST00000392185 DEFB135Q30KP9 77 aa12.47□□□□□ -0.41
SNX9-201ENST00000392185 CLPSL2Q6UWE3 100 aa12.47□□□□□ -0.41
SNX9-201ENST00000392185 A0A1B0GWB2 263 aa12.46□□□□□ -0.41
SNX9-201ENST00000392185 TP53TG3Q9ULZ0 132 aa12.46□□□□□ -0.41
SNX9-201ENST00000392185 PRSS29PA6NIE9 313 aa12.46□□□□□ -0.41
SNX9-201ENST00000392185 PAX4O43316 350 aa12.46□□□□□ -0.41
SNX9-201ENST00000392185 DEFB125Q8N687 156 aa12.46□□□□□ -0.41
SNX9-201ENST00000392185 LINC01006Q8NI28 216 aa12.46□□□□□ -0.41
SNX9-201ENST00000392185 ZNF479Q96JC4 524 aa12.46□□□□□ -0.41
SNX9-201ENST00000392185 CBY1Q9Y3M2 126 aa12.46□□□□□ -0.42
SNX9-201ENST00000392185 RASL10AQ92737 203 aa12.45□□□□□ -0.42
SNX9-201ENST00000392185 TRBV6-1A0A0K0K1D8 114 aa12.45□□□□□ -0.42
SNX9-201ENST00000392185 DEFB114Q30KQ6 69 aa12.45□□□□□ -0.42
SNX9-201ENST00000392185 MORN3Q6PF18 240 aaPredicted RBP12.45□□□□□ -0.42
SNX9-201ENST00000392185 TMEM238C9JI98 176 aa12.44□□□□□ -0.42
SNX9-201ENST00000392185 MBD6Q96DN6 1003 aa12.44□□□□□ -0.42
SNX9-201ENST00000392185 FLNAP21333 2647 aaKnown RBP12.44□□□□□ -0.42
SNX9-201ENST00000392185 TRAV8-2A0A0B4J237 113 aa12.44□□□□□ -0.42
SNX9-201ENST00000392185 SNHG12Q9BXW3 62 aa12.44□□□□□ -0.42
SNX9-201ENST00000392185 EDN2P20800 178 aa12.44□□□□□ -0.42
SNX9-201ENST00000392185 UBE2DNLQ8IWF7 75 aa12.44□□□□□ -0.42
SNX9-201ENST00000392185 TMEM141Q96I45 108 aa12.44□□□□□ -0.42
SNX9-201ENST00000392185 PSMG3-AS1Q96PY0 264 aa12.44□□□□□ -0.42
SNX9-201ENST00000392185 RPL39P62891 51 aaKnown RBP12.43□□□□□ -0.42
SNX9-201ENST00000392185 ATRQ13535 2644 aa12.43□□□□□ -0.42
SNX9-201ENST00000392185 TRAV25A0A0B4J276 109 aa12.43□□□□□ -0.42
SNX9-201ENST00000392185 A0A1B0GXF2 115 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms