RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 AP5S1Q9NUS5 200 aa8.4□□□□□ -1.06
SMARCAL1-203ENST00000392128 MDFICQ9P1T7 246 aa8.4□□□□□ -1.06
SMARCAL1-203ENST00000392128 IFI27P40305 119 aaPredicted RBP8.4□□□□□ -1.07
SMARCAL1-203ENST00000392128 PTTG1IPP53801 180 aa8.4□□□□□ -1.07
SMARCAL1-203ENST00000392128 FA2HQ7L5A8 372 aa8.4□□□□□ -1.07
SMARCAL1-203ENST00000392128 LINC00467Q9BRT7 94 aa8.4□□□□□ -1.07
SMARCAL1-203ENST00000392128 GAS8-AS1O95177 125 aa8.39□□□□□ -1.07
SMARCAL1-203ENST00000392128 TNFRSF6BO95407 300 aa8.39□□□□□ -1.07
SMARCAL1-203ENST00000392128 INSP01308 110 aa8.39□□□□□ -1.07
SMARCAL1-203ENST00000392128 MAP1LC3AQ9H492 121 aa8.39□□□□□ -1.07
SMARCAL1-203ENST00000392128 C19orf73Q9NVV2 129 aa8.39□□□□□ -1.07
SMARCAL1-203ENST00000392128 LOC389332A0A1B0GUA5 103 aa8.39□□□□□ -1.07
SMARCAL1-203ENST00000392128 DEFB125Q8N687 156 aa8.39□□□□□ -1.07
SMARCAL1-203ENST00000392128 C14orf178Q8N769 122 aaPredicted RBP8.39□□□□□ -1.07
SMARCAL1-203ENST00000392128 POM121L12Q8N7R1 296 aa8.39□□□□□ -1.07
SMARCAL1-203ENST00000392128 SCGB1D1O95968 90 aa8.38□□□□□ -1.07
SMARCAL1-203ENST00000392128 INSL3P51460 131 aa8.38□□□□□ -1.07
SMARCAL1-203ENST00000392128 PMCHL1Q16048 86 aa8.38□□□□□ -1.07
SMARCAL1-203ENST00000392128 NRACQ8N912 160 aa8.38□□□□□ -1.07
SMARCAL1-203ENST00000392128 SYT8Q8NBV8 401 aa8.38□□□□□ -1.07
SMARCAL1-203ENST00000392128 KIF25-AS1Q9Y6Z4 181 aa8.38□□□□□ -1.07
SMARCAL1-203ENST00000392128 BAHCC1Q9P281 2608 aa8.38□□□□□ -1.07
SMARCAL1-203ENST00000392128 LINC01546A6NGU7 62 aa8.38□□□□□ -1.07
SMARCAL1-203ENST00000392128 GATA1P15976 413 aaPredicted RBP8.38□□□□□ -1.07
SMARCAL1-203ENST00000392128 TRAV26-2A0A0B4J265 109 aa8.37□□□□□ -1.07
SMARCAL1-203ENST00000392128 C20orf202A1L168 122 aa8.37□□□□□ -1.07
SMARCAL1-203ENST00000392128 KRTDAPP60985 99 aa8.37□□□□□ -1.07
SMARCAL1-203ENST00000392128 NXT2Q9NPJ8 142 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-203ENST00000392128 C3orf79P0CE67 100 aa8.37□□□□□ -1.07
SMARCAL1-203ENST00000392128 SMIM17P0DL12 118 aa8.37□□□□□ -1.07
SMARCAL1-203ENST00000392128 LINC00315P59091 139 aa8.37□□□□□ -1.07
SMARCAL1-203ENST00000392128 ZNF479Q96JC4 524 aa8.37□□□□□ -1.07
SMARCAL1-203ENST00000392128 VPS25Q9BRG1 176 aa8.37□□□□□ -1.07
SMARCAL1-203ENST00000392128 LEPROTL1O95214 131 aa8.36□□□□□ -1.07
SMARCAL1-203ENST00000392128 C9orf66Q5T8R8 295 aa8.36□□□□□ -1.07
SMARCAL1-203ENST00000392128 LINC01587Q99440 93 aa8.36□□□□□ -1.07
SMARCAL1-203ENST00000392128 MGPP08493 103 aa8.35□□□□□ -1.07
SMARCAL1-203ENST00000392128 RNF151Q2KHN1 245 aa8.35□□□□□ -1.07
SMARCAL1-203ENST00000392128 Q8N976 141 aa8.35□□□□□ -1.07
SMARCAL1-203ENST00000392128 XCL2Q9UBD3 114 aa8.35□□□□□ -1.07
SMARCAL1-203ENST00000392128 IGLV2-18A0A075B6J9 118 aa8.35□□□□□ -1.07
SMARCAL1-203ENST00000392128 ZNF415Q09FC8 603 aa8.35□□□□□ -1.07
SMARCAL1-203ENST00000392128 Q8N8P6 123 aa8.35□□□□□ -1.07
SMARCAL1-203ENST00000392128 JPT2Q9H910 190 aa8.35□□□□□ -1.07
SMARCAL1-203ENST00000392128 A0A096LNJ9 63 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 CYSRT1A8MQ03 144 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 PPP1R17O96001 155 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 HTN1P15515 57 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 PIK3CD-AS1Q5SR53 167 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 RASL10AQ92737 203 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 PTH2Q96A98 100 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 WFDC10AQ9H1F0 79 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 HSPB8Q9UJY1 196 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 ZNF876PQ49A33 203 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 C1orf158Q8N1D5 194 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 C11orf72Q8NBR9 251 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 SPATA3Q8NHX4 192 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 ORAOV1Q8WV07 137 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 C20orf78Q9BR46 151 aa8.34□□□□□ -1.07
SMARCAL1-203ENST00000392128 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
SMARCAL1-203ENST00000392128 TMEM70Q9BUB7 260 aa8.33□□□□□ -1.08
SMARCAL1-203ENST00000392128 A0A087WWL8 130 aa8.33□□□□□ -1.08
SMARCAL1-203ENST00000392128 M0R2P5 195 aa8.33□□□□□ -1.08
SMARCAL1-203ENST00000392128 HBDP02042 147 aa8.33□□□□□ -1.08
SMARCAL1-203ENST00000392128 CRYGDP07320 174 aa8.33□□□□□ -1.08
SMARCAL1-203ENST00000392128 GIG44P09565 113 aaPredicted RBP8.33□□□□□ -1.08
SMARCAL1-203ENST00000392128 MORN3Q6PF18 240 aaPredicted RBP8.33□□□□□ -1.08
SMARCAL1-203ENST00000392128 LINC00173Q6ZV60 143 aa8.33□□□□□ -1.08
SMARCAL1-203ENST00000392128 TEP1Q99973 2627 aaKnown RBP8.33□□□□□ -1.08
SMARCAL1-203ENST00000392128 TENM1Q9UKZ4 2725 aa8.33□□□□□ -1.08
SMARCAL1-203ENST00000392128 CCL25O15444 150 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 PRM2P04554 102 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 SUMO2P61956 95 aaKnown RBP8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 KRTAP24-1Q3LI83 254 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 SUMO4Q6EEV6 95 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 RPL39LQ96EH5 51 aaKnown RBP8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 SPXQ9BT56 116 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 MCRIP2Q9BUT9 160 aaKnown RBP8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 SMIM2Q9BVW6 85 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 JMJD1CQ15652 2540 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 KIR2DL5BA0A0G2JN68 375 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 KIR2DL5BA0A0G2JPC4 375 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 GTSCR1Q86UQ5 136 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 KIR2DL5AQ8N109 375 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 WFDC9Q8NEX5 89 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 ZNF747Q9BV97 191 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 C1QTNF4Q9BXJ3 329 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 MAP1LC3CQ9BXW4 147 aa8.32□□□□□ -1.08
SMARCAL1-203ENST00000392128 SYS1-DBNDD2H3BUS1 97 aa8.31□□□□□ -1.08
SMARCAL1-203ENST00000392128 COL5A1-AS1Q5SY13 56 aa8.31□□□□□ -1.08
SMARCAL1-203ENST00000392128 FAM74A4Q5TZK3 123 aa8.31□□□□□ -1.08
SMARCAL1-203ENST00000392128 ATRQ13535 2644 aa8.31□□□□□ -1.08
SMARCAL1-203ENST00000392128 RPL35AP18077 110 aaKnown RBP8.31□□□□□ -1.08
SMARCAL1-203ENST00000392128 FCER1GP30273 86 aa8.31□□□□□ -1.08
SMARCAL1-203ENST00000392128 RPL32P62910 135 aaKnown RBP8.31□□□□□ -1.08
SMARCAL1-203ENST00000392128 A8MWV9 139 aa8.3□□□□□ -1.08
SMARCAL1-203ENST00000392128 F5H697 171 aa8.3□□□□□ -1.08
SMARCAL1-203ENST00000392128 K7EMI3 77 aa8.3□□□□□ -1.08
SMARCAL1-203ENST00000392128 UBE2V1Q13404 147 aa8.3□□□□□ -1.08
SMARCAL1-203ENST00000392128 IL17DQ8TAD2 202 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms