RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 IFI6P09912 130 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 PYYP10082 97 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 RBM11P57052 281 aaKnown RBP1.62□□□□□ -2.15
PTPRC-205ENST00000391970 ZNF791Q3KP31 576 aaPredicted RBP1.62□□□□□ -2.15
PTPRC-205ENST00000391970 CLLU1OSQ5K130 101 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 TMEM170BQ5T4T1 132 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 FKBP1CQ5VVH2 108 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 DGAT2L6Q6ZPD8 337 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 KRTAP5-5Q701N2 237 aaPredicted RBP1.62□□□□□ -2.15
PTPRC-205ENST00000391970 FP248Q71RG6 208 aaPredicted RBP1.62□□□□□ -2.15
PTPRC-205ENST00000391970 BAGE3Q86Y29 109 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 BAGE2Q86Y30 109 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 AMN1Q8IY45 258 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 Q8N2B8 174 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 C10orf126Q8N4M7 172 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 LY6G5BQ8NDX9 201 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 TRGV9Q99603 122 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 TM2D3Q9BRN9 247 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 PLA2G12AQ9BZM1 189 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 OSTCQ9NRP0 149 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 PTPRSQ13332 1948 aa1.62□□□□□ -2.15
PTPRC-205ENST00000391970 THADAQ6YHU6 1953 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 TNRC6BQ9UPQ9 1833 aaKnown RBP1.61□□□□□ -2.15
PTPRC-205ENST00000391970 TRBV20OR9-2A0A075B6H5 130 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 IGHV3OR15-7A0A075B7D8 119 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 CTXND1A0A1B0GTU2 59 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 A6NIN4 97 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 IBA57-AS1B1ANH7 110 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 H3BT86 120 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 TCL1BO95988 128 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 CD7P09564 240 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 ASAH2BP0C7U1 165 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 COX6A1P12074 109 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 IL9P15248 144 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 CCL1P22362 96 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 S100A3P33764 101 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 SSR2P43308 183 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 EFNA4P52798 201 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 FXYD2P54710 66 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 NPC2P61916 151 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 RPL38P63173 70 aaKnown RBP1.61□□□□□ -2.15
PTPRC-205ENST00000391970 CCL8P80075 99 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 KLKP1Q107X0 134 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 PP632Q6XCG6 107 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 Q6ZQT7 251 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 KTN1-AS1Q86SY8 53 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 TRAPPC6BQ86SZ2 158 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 LINC00643Q86TS7 51 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 NDUFA11Q86Y39 141 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 SERP2Q8N6R1 65 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 C1orf64Q8NEQ6 169 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 IFI27L1Q96BM0 104 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 IGF2BP2-AS1Q96M15 143 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 GPX7Q96SL4 187 aaPredicted RBP1.61□□□□□ -2.15
PTPRC-205ENST00000391970 DPH3P1Q9H4G8 78 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 OTORQ9NRC9 128 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 ZNF492Q9P255 531 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 TP73-AS1Q9UF72 201 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 PKIGQ9Y2B9 76 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 V9GYV3 84 aa1.61□□□□□ -2.15
PTPRC-205ENST00000391970 SVILO95425 2214 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 IGHV1-58A0A0C4DH39 117 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 MYMXA0A1B0GTQ4 84 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 LOC389332A0A1B0GUA5 103 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 UBE2L5PA0A1B0GUS4 154 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 MDFIC2A0A1B0GVS7 189 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 FAM24AA6NFZ4 105 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 A8MWV9 139 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 E7EQL1 145 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 FSTL3O95633 263 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 NPYP01303 97 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 TRACP01848 142 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 SLC25A16P16260 332 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 NPPCP23582 126 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 GCHFRP30047 84 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 FXYD6P3P58550 94 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 DYNLT1P63172 113 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 UBE2L3P68036 154 aaKnown RBP1.6□□□□□ -2.15
PTPRC-205ENST00000391970 TMEM155Q4W5P6 130 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 SCGB1D4Q6XE38 83 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 PHF5AQ7RTV0 110 aaKnown RBP1.6□□□□□ -2.15
PTPRC-205ENST00000391970 CLECL1Q8IZS7 167 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 SLC22A24Q8N4F4 322 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 ITLN2Q8WWU7 325 aaPredicted RBP1.6□□□□□ -2.15
PTPRC-205ENST00000391970 ZC2HC1AQ96GY0 325 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 MGST2Q99735 147 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 AICDAQ9GZX7 198 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 GNG13Q9P2W3 67 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 HHLA3Q9XRX5 114 aa1.6□□□□□ -2.15
PTPRC-205ENST00000391970 AMMECR1Q9Y4X0 333 aaPredicted RBP1.6□□□□□ -2.15
PTPRC-205ENST00000391970 A0A0D9SEW6 157 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 C17orf51A8MQB3 221 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 CEBPZOSA8MTT3 80 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 TMEM14DPA8MWL7 114 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 CCL16O15467 120 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 NDUFC1O43677 76 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 ENSAO43768 121 aaKnown RBP1.59□□□□□ -2.15
PTPRC-205ENST00000391970 LEPROTL1O95214 131 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 EPPINO95925 133 aa1.59□□□□□ -2.15
PTPRC-205ENST00000391970 INAFM2P0DMQ5 153 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms