RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 SMIM13P0DJ93 91 aa9.7□□□□□ -0.86
ERCC2-204ENST00000391945 DEFB130BP0DP73 79 aa9.7□□□□□ -0.86
ERCC2-204ENST00000391945 DEFB130AP0DP74 79 aa9.7□□□□□ -0.86
ERCC2-204ENST00000391945 CD5LO43866 347 aa9.7□□□□□ -0.86
ERCC2-204ENST00000391945 PSMB2P49721 201 aa9.7□□□□□ -0.86
ERCC2-204ENST00000391945 CHTOPQ9Y3Y2 248 aaKnown RBP9.7□□□□□ -0.86
ERCC2-204ENST00000391945 TMEM262E9PQX1 116 aa9.69□□□□□ -0.86
ERCC2-204ENST00000391945 GEMIN7Q9H840 131 aaKnown RBP9.69□□□□□ -0.86
ERCC2-204ENST00000391945 CFAP161Q6P656 301 aa9.69□□□□□ -0.86
ERCC2-204ENST00000391945 CITED1Q99966 193 aa9.69□□□□□ -0.86
ERCC2-204ENST00000391945 TACC2O95359 2948 aa9.69□□□□□ -0.86
ERCC2-204ENST00000391945 IGHV3-64A0A075B6Q5 118 aa9.69□□□□□ -0.86
ERCC2-204ENST00000391945 VCYO14598 125 aa9.69□□□□□ -0.86
ERCC2-204ENST00000391945 CMC4P56277 68 aaPredicted RBP9.69□□□□□ -0.86
ERCC2-204ENST00000391945 C4orf3Q8WVX3 66 aa9.69□□□□□ -0.86
ERCC2-204ENST00000391945 SPAG8Q99932 426 aaPredicted RBP9.69□□□□□ -0.86
ERCC2-204ENST00000391945 VCX2Q9H322 139 aa9.68□□□□□ -0.86
ERCC2-204ENST00000391945 TRBV6-1A0A0K0K1D8 114 aa9.68□□□□□ -0.86
ERCC2-204ENST00000391945 MRPS12O15235 138 aaKnown RBP9.68□□□□□ -0.86
ERCC2-204ENST00000391945 APOMO95445 188 aa9.68□□□□□ -0.86
ERCC2-204ENST00000391945 TMEM86BQ8N661 226 aa9.68□□□□□ -0.86
ERCC2-204ENST00000391945 MRPL16Q9NX20 251 aaKnown RBP9.68□□□□□ -0.86
ERCC2-204ENST00000391945 SDHAF1A6NFY7 115 aa9.68□□□□□ -0.86
ERCC2-204ENST00000391945 LGALS3P17931 250 aaKnown RBP9.68□□□□□ -0.86
ERCC2-204ENST00000391945 ANKRD39Q53RE8 183 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 Q8N1Y9 231 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 MRAP2Q96G30 205 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 PSMG3-AS1Q96PY0 264 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 SPCS1Q9Y6A9 102 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 COX11Q9Y6N1 276 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 A0A0J9YX75 114 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 PAPPA-AS1Q5QFB9 102 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 Q6ZQT7 251 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 RPL39LQ96EH5 51 aaKnown RBP9.67□□□□□ -0.86
ERCC2-204ENST00000391945 LY6G6DO95868 133 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 C1QTNF4Q9BXJ3 329 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 MRPL35Q9NZE8 188 aaKnown RBP9.67□□□□□ -0.86
ERCC2-204ENST00000391945 HSD52Q0P140 79 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 Q8N8P6 123 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 JPT2Q9H910 190 aa9.67□□□□□ -0.86
ERCC2-204ENST00000391945 MDFICQ9P1T7 246 aa9.66□□□□□ -0.86
ERCC2-204ENST00000391945 IGHV3-38A0A0C4DH36 116 aa9.66□□□□□ -0.86
ERCC2-204ENST00000391945 C2orf66Q6UXQ4 117 aa9.66□□□□□ -0.86
ERCC2-204ENST00000391945 PCP2Q8IVA1 136 aa9.66□□□□□ -0.86
ERCC2-204ENST00000391945 SMIM2Q9BVW6 85 aa9.66□□□□□ -0.86
ERCC2-204ENST00000391945 TTTY13Q9BZ97 58 aa9.66□□□□□ -0.86
ERCC2-204ENST00000391945 GAGE12BA1L429 117 aa9.66□□□□□ -0.86
ERCC2-204ENST00000391945 GAGE7O76087 117 aa9.66□□□□□ -0.86
ERCC2-204ENST00000391945 GAGE12FP0CL80 117 aa9.66□□□□□ -0.86
ERCC2-204ENST00000391945 GAGE12GP0CL81 117 aa9.66□□□□□ -0.86
ERCC2-204ENST00000391945 GAGE12IP0CL82 117 aa9.66□□□□□ -0.86
ERCC2-204ENST00000391945 ZNF815PA8K554 130 aa9.65□□□□□ -0.86
ERCC2-204ENST00000391945 K7EQG2 157 aa9.65□□□□□ -0.86
ERCC2-204ENST00000391945 CTRLP40313 264 aa9.65□□□□□ -0.86
ERCC2-204ENST00000391945 LINC01006Q8NI28 216 aa9.65□□□□□ -0.86
ERCC2-204ENST00000391945 COX8AP10176 69 aa9.65□□□□□ -0.86
ERCC2-204ENST00000391945 SEC11AP67812 179 aa9.65□□□□□ -0.86
ERCC2-204ENST00000391945 LGALS9BQ3B8N2 356 aa9.65□□□□□ -0.87
ERCC2-204ENST00000391945 C19orf54Q5BKX5 351 aa9.65□□□□□ -0.87
ERCC2-204ENST00000391945 LGALS9CQ6DKI2 356 aa9.65□□□□□ -0.87
ERCC2-204ENST00000391945 UBE2V1Q13404 147 aa9.64□□□□□ -0.87
ERCC2-204ENST00000391945 MRPL52Q86TS9 123 aaKnown RBP9.64□□□□□ -0.87
ERCC2-204ENST00000391945 TP53TG1Q9Y2A0 90 aa9.64□□□□□ -0.87
ERCC2-204ENST00000391945 AGRNO00468 2067 aa9.64□□□□□ -0.87
ERCC2-204ENST00000391945 TMEM238LA0A1B0GVL6 79 aa9.64□□□□□ -0.87
ERCC2-204ENST00000391945 A6NJY4 79 aa9.64□□□□□ -0.87
ERCC2-204ENST00000391945 AZU1P20160 251 aa9.64□□□□□ -0.87
ERCC2-204ENST00000391945 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
ERCC2-204ENST00000391945 ZFAND2AQ8N6M9 145 aa9.64□□□□□ -0.87
ERCC2-204ENST00000391945 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
ERCC2-204ENST00000391945 C11orf21Q9P2W6 132 aa9.64□□□□□ -0.87
ERCC2-204ENST00000391945 RELNP78509 3460 aa9.63□□□□□ -0.87
ERCC2-204ENST00000391945 PRR9Q5T870 116 aa9.63□□□□□ -0.87
ERCC2-204ENST00000391945 LINC01545Q5VT33 79 aa9.63□□□□□ -0.87
ERCC2-204ENST00000391945 TRPT1Q86TN4 253 aaKnown RBP9.63□□□□□ -0.87
ERCC2-204ENST00000391945 BVES-AS1Q5T3Y7 98 aa9.63□□□□□ -0.87
ERCC2-204ENST00000391945 CHCHD5Q9BSY4 110 aa9.62□□□□□ -0.87
ERCC2-204ENST00000391945 U3KQE9 123 aa9.62□□□□□ -0.87
ERCC2-204ENST00000391945 GAGE12JA6NER3 117 aa9.62□□□□□ -0.87
ERCC2-204ENST00000391945 IGLC6P0CF74 106 aa9.62□□□□□ -0.87
ERCC2-204ENST00000391945 GAGE1Q13065 139 aa9.62□□□□□ -0.87
ERCC2-204ENST00000391945 GAGE4Q13068 117 aa9.62□□□□□ -0.87
ERCC2-204ENST00000391945 GAGE5Q13069 117 aa9.62□□□□□ -0.87
ERCC2-204ENST00000391945 DEFB114Q30KQ6 69 aa9.62□□□□□ -0.87
ERCC2-204ENST00000391945 GAGE13Q4V321 117 aa9.62□□□□□ -0.87
ERCC2-204ENST00000391945 MAP6D1Q9H9H5 199 aa9.62□□□□□ -0.87
ERCC2-204ENST00000391945 CHAC1Q9BUX1 264 aa9.62□□□□□ -0.87
ERCC2-204ENST00000391945 NOP10Q9NPE3 64 aaKnown RBP9.62□□□□□ -0.87
ERCC2-204ENST00000391945 A8MWV9 139 aa9.61□□□□□ -0.87
ERCC2-204ENST00000391945 LGALS9O00182 355 aa9.61□□□□□ -0.87
ERCC2-204ENST00000391945 CRIP2P52943 208 aaPredicted RBP9.61□□□□□ -0.87
ERCC2-204ENST00000391945 ATRQ13535 2644 aa9.61□□□□□ -0.87
ERCC2-204ENST00000391945 SMAGPQ0VAQ4 97 aa9.61□□□□□ -0.87
ERCC2-204ENST00000391945 TMEM238C9JI98 176 aa9.61□□□□□ -0.87
ERCC2-204ENST00000391945 ADAMTSL5Q6ZMM2 481 aa9.61□□□□□ -0.87
ERCC2-204ENST00000391945 ZNRF2Q8NHG8 242 aa9.61□□□□□ -0.87
ERCC2-204ENST00000391945 TOMM7Q9P0U1 55 aa9.61□□□□□ -0.87
ERCC2-204ENST00000391945 PLNP26678 52 aa9.6□□□□□ -0.87
ERCC2-204ENST00000391945 TMEM101Q96IK0 257 aa9.6□□□□□ -0.87
ERCC2-204ENST00000391945 M0R2P5 195 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms