RNA–Protein interactions for RNA: ENST00000390392.3

TRBV4-2-201, Transcript of T cell receptor beta variable 4-2, humanhuman

APPRIS P1 BASIC

Gene TRBV4-2, Length 455 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-2-201ENST00000390392 CXCL1P09341 107 aa9.1□□□□□ -0.95
TRBV4-2-201ENST00000390392 LINC00694P0DN24 101 aa9.1□□□□□ -0.95
TRBV4-2-201ENST00000390392 AKR1C3P42330 323 aa9.1□□□□□ -0.95
TRBV4-2-201ENST00000390392 GAGE1Q13065 139 aa9.1□□□□□ -0.95
TRBV4-2-201ENST00000390392 GAGE4Q13068 117 aa9.1□□□□□ -0.95
TRBV4-2-201ENST00000390392 GAGE5Q13069 117 aa9.1□□□□□ -0.95
TRBV4-2-201ENST00000390392 GAGE13Q4V321 117 aa9.1□□□□□ -0.95
TRBV4-2-201ENST00000390392 Q8N814 137 aa9.1□□□□□ -0.95
TRBV4-2-201ENST00000390392 SFT2D1Q8WV19 159 aa9.1□□□□□ -0.95
TRBV4-2-201ENST00000390392 FRZBQ92765 325 aa9.1□□□□□ -0.95
TRBV4-2-201ENST00000390392 URGCP-MRPS24S4R325 110 aa9.1□□□□□ -0.95
TRBV4-2-201ENST00000390392 HSPG2P98160 4391 aa9.09□□□□□ -0.95
TRBV4-2-201ENST00000390392 PAGE4O60829 102 aa9.09□□□□□ -0.95
TRBV4-2-201ENST00000390392 C1QBP02746 253 aa9.09□□□□□ -0.95
TRBV4-2-201ENST00000390392 KRTAP10-1P60331 282 aa9.09□□□□□ -0.95
TRBV4-2-201ENST00000390392 ELOBQ15370 118 aa9.09□□□□□ -0.95
TRBV4-2-201ENST00000390392 RMI2Q96E14 147 aa9.09□□□□□ -0.95
TRBV4-2-201ENST00000390392 TMEM70Q9BUB7 260 aa9.09□□□□□ -0.95
TRBV4-2-201ENST00000390392 CHCHD7Q9BUK0 85 aa9.09□□□□□ -0.95
TRBV4-2-201ENST00000390392 SAMD10Q9BYL1 202 aa9.09□□□□□ -0.95
TRBV4-2-201ENST00000390392 GRIFINA4D1Z8 144 aa9.08□□□□□ -0.96
TRBV4-2-201ENST00000390392 RPL36AP83881 106 aaKnown RBP9.08□□□□□ -0.96
TRBV4-2-201ENST00000390392 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.08□□□□□ -0.96
TRBV4-2-201ENST00000390392 RPL36ALQ969Q0 106 aaKnown RBP9.08□□□□□ -0.96
TRBV4-2-201ENST00000390392 JPT2Q9H910 190 aa9.08□□□□□ -0.96
TRBV4-2-201ENST00000390392 Q9HAA7 133 aa9.08□□□□□ -0.96
TRBV4-2-201ENST00000390392 M0R381 172 aa9.07□□□□□ -0.96
TRBV4-2-201ENST00000390392 H2AFB1P0C5Y9 115 aa9.07□□□□□ -0.96
TRBV4-2-201ENST00000390392 FAM74A4Q5TZK3 123 aa9.07□□□□□ -0.96
TRBV4-2-201ENST00000390392 KCNIP4Q6PIL6 250 aa9.07□□□□□ -0.96
TRBV4-2-201ENST00000390392 BAGE2Q86Y30 109 aa9.07□□□□□ -0.96
TRBV4-2-201ENST00000390392 C14orf178Q8N769 122 aaPredicted RBP9.07□□□□□ -0.96
TRBV4-2-201ENST00000390392 FAM213BQ8TBF2 198 aa9.07□□□□□ -0.96
TRBV4-2-201ENST00000390392 MLST8Q9BVC4 326 aa9.07□□□□□ -0.96
TRBV4-2-201ENST00000390392 ZNF471Q9BX82 626 aaPredicted RBP9.07□□□□□ -0.96
TRBV4-2-201ENST00000390392 TRBV7-3A0A075B6L6 115 aa9.06□□□□□ -0.96
TRBV4-2-201ENST00000390392 FAM229AH3BQW9 127 aa9.06□□□□□ -0.96
TRBV4-2-201ENST00000390392 SMLR1H3BR10 107 aa9.06□□□□□ -0.96
TRBV4-2-201ENST00000390392 TEX46H3BTG2 121 aa9.06□□□□□ -0.96
TRBV4-2-201ENST00000390392 BCL2L11O43521 198 aa9.06□□□□□ -0.96
TRBV4-2-201ENST00000390392 FUSP35637 526 aaKnown RBP eCLIP9.06□□□□□ -0.96
TRBV4-2-201ENST00000390392 RAB4BP61018 213 aa9.06□□□□□ -0.96
TRBV4-2-201ENST00000390392 EIF5AL1Q6IS14 154 aaKnown RBP9.06□□□□□ -0.96
TRBV4-2-201ENST00000390392 TMUB2Q71RG4 321 aa9.06□□□□□ -0.96
TRBV4-2-201ENST00000390392 RAB5CP51148 216 aa9.05□□□□□ -0.96
TRBV4-2-201ENST00000390392 NIT1Q86X76 327 aa9.05□□□□□ -0.96
TRBV4-2-201ENST00000390392 SSBP4Q9BWG4 385 aaPredicted RBP9.05□□□□□ -0.96
TRBV4-2-201ENST00000390392 DNAH5Q8TE73 4624 aa9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 A0A087WWL8 130 aa9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 A0A087WX48 190 aa9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 TMSB15BA0A087X1C1 80 aa9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 OR5AL1P0C617 328 aa9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 INAFM2P0DMQ5 153 aa9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 PKIAP61925 76 aa9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 Q0VG73 95 aa9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 TMEM97Q5BJF2 176 aa9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 DAZ4Q86SG3 579 aaKnown RBP9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 OR10G8Q8NGN5 311 aa9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 MANBALQ9NQG1 85 aa9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 DAZ3Q9NR90 486 aaKnown RBP9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 Q9UF83 564 aa9.04□□□□□ -0.96
TRBV4-2-201ENST00000390392 TRAV1-1A0A0B4J248 108 aa9.03□□□□□ -0.96
TRBV4-2-201ENST00000390392 SNAI2O43623 268 aa9.03□□□□□ -0.96
TRBV4-2-201ENST00000390392 UBE2D3P61077 147 aa9.03□□□□□ -0.96
TRBV4-2-201ENST00000390392 UBE2D2P62837 147 aa9.03□□□□□ -0.96
TRBV4-2-201ENST00000390392 Q8N976 141 aa9.03□□□□□ -0.96
TRBV4-2-201ENST00000390392 APOBP04114 4563 aaKnown RBP9.02□□□□□ -0.97
TRBV4-2-201ENST00000390392 SCO2A0A1W2PP80 73 aa9.02□□□□□ -0.97
TRBV4-2-201ENST00000390392 Q5VSD8 79 aa9.02□□□□□ -0.97
TRBV4-2-201ENST00000390392 SPANXN1Q5VSR9 72 aa9.02□□□□□ -0.97
TRBV4-2-201ENST00000390392 SMIM12Q96EX1 92 aa9.02□□□□□ -0.97
TRBV4-2-201ENST00000390392 PRR27Q6MZM9 219 aa9.01□□□□□ -0.97
TRBV4-2-201ENST00000390392 BIN3Q9NQY0 253 aa9.01□□□□□ -0.97
TRBV4-2-201ENST00000390392 TRBV6-8A0A0A6YYG3 113 aa9□□□□□ -0.97
TRBV4-2-201ENST00000390392 TMEM262E9PQX1 116 aa9□□□□□ -0.97
TRBV4-2-201ENST00000390392 SMIM17P0DL12 118 aa9□□□□□ -0.97
TRBV4-2-201ENST00000390392 RPS20P60866 119 aaKnown RBP9□□□□□ -0.97
TRBV4-2-201ENST00000390392 ZNF56Q15929 161 aa9□□□□□ -0.97
TRBV4-2-201ENST00000390392 ATRAIDQ6UW56 229 aa9□□□□□ -0.97
TRBV4-2-201ENST00000390392 C11orf52Q96A22 123 aa9□□□□□ -0.97
TRBV4-2-201ENST00000390392 DAZAP1Q96EP5 407 aaKnown RBP9□□□□□ -0.97
TRBV4-2-201ENST00000390392 KLK12Q9UKR0 248 aa9□□□□□ -0.97
TRBV4-2-201ENST00000390392 ABCA13Q86UQ4 5058 aa9□□□□□ -0.97
TRBV4-2-201ENST00000390392 A0A1B0GV50 99 aa8.99□□□□□ -0.97
TRBV4-2-201ENST00000390392 XKRY2A2RUG3 117 aa8.99□□□□□ -0.97
TRBV4-2-201ENST00000390392 RBFOX3A6NFN3 312 aa8.99□□□□□ -0.97
TRBV4-2-201ENST00000390392 RPL35P42766 123 aaKnown RBP8.99□□□□□ -0.97
TRBV4-2-201ENST00000390392 OR10AG1Q8NH19 301 aa8.99□□□□□ -0.97
TRBV4-2-201ENST00000390392 IGKV2D-24A0A075B6R9 120 aa8.98□□□□□ -0.97
TRBV4-2-201ENST00000390392 F2Z2F3 143 aa8.98□□□□□ -0.97
TRBV4-2-201ENST00000390392 F5H697 171 aa8.98□□□□□ -0.97
TRBV4-2-201ENST00000390392 PDE6DO43924 150 aa8.98□□□□□ -0.97
TRBV4-2-201ENST00000390392 SMR3BP02814 79 aaPredicted RBP8.98□□□□□ -0.97
TRBV4-2-201ENST00000390392 TAGLN2P37802 199 aaKnown RBP8.98□□□□□ -0.97
TRBV4-2-201ENST00000390392 NKX2-5P52952 324 aaPredicted RBP8.98□□□□□ -0.97
TRBV4-2-201ENST00000390392 CCL20P78556 96 aa8.98□□□□□ -0.97
TRBV4-2-201ENST00000390392 RPL19P84098 196 aaKnown RBP8.98□□□□□ -0.97
TRBV4-2-201ENST00000390392 C14orf177Q52M58 125 aa8.98□□□□□ -0.97
TRBV4-2-201ENST00000390392 Q8N3U1 123 aa8.98□□□□□ -0.97
TRBV4-2-201ENST00000390392 NEXN-AS1Q8NBZ9 246 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms