RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 IGHV1-24A0A0C4DH33 117 aa9.97□□□□□ -0.81
PTPRN2-202ENST00000389416 RNASE13Q5GAN3 156 aaKnown RBP9.97□□□□□ -0.81
PTPRN2-202ENST00000389416 PLEKHB2Q96CS7 222 aa9.97□□□□□ -0.81
PTPRN2-202ENST00000389416 CHAC1Q9BUX1 264 aa9.97□□□□□ -0.81
PTPRN2-202ENST00000389416 XIRP2A4UGR9 3374 aa9.97□□□□□ -0.81
PTPRN2-202ENST00000389416 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
PTPRN2-202ENST00000389416 DEFB125Q8N687 156 aa9.97□□□□□ -0.81
PTPRN2-202ENST00000389416 ZNF702PQ9H963 129 aa9.97□□□□□ -0.81
PTPRN2-202ENST00000389416 A0A087X0K7 114 aa9.97□□□□□ -0.81
PTPRN2-202ENST00000389416 KLF5Q13887 457 aaPredicted RBP9.97□□□□□ -0.81
PTPRN2-202ENST00000389416 PRIMA1Q86XR5 153 aa9.96□□□□□ -0.81
PTPRN2-202ENST00000389416 TIMM21Q9BVV7 248 aa9.96□□□□□ -0.81
PTPRN2-202ENST00000389416 CDH23Q9H251 3354 aa9.96□□□□□ -0.81
PTPRN2-202ENST00000389416 PTPRBP23467 1997 aa9.96□□□□□ -0.81
PTPRN2-202ENST00000389416 RAI1Q7Z5J4 1906 aaPredicted RBP9.96□□□□□ -0.81
PTPRN2-202ENST00000389416 RPL39LQ96EH5 51 aaKnown RBP9.96□□□□□ -0.82
PTPRN2-202ENST00000389416 ZNF292O60281 2723 aa9.96□□□□□ -0.82
PTPRN2-202ENST00000389416 RHOHQ15669 191 aa9.96□□□□□ -0.82
PTPRN2-202ENST00000389416 ZFAND3Q9H8U3 227 aa9.96□□□□□ -0.82
PTPRN2-202ENST00000389416 MAP6D1Q9H9H5 199 aa9.96□□□□□ -0.82
PTPRN2-202ENST00000389416 VWC2LB2RUY7 222 aa9.95□□□□□ -0.82
PTPRN2-202ENST00000389416 H3BUT2 72 aa9.95□□□□□ -0.82
PTPRN2-202ENST00000389416 CRLF1O75462 422 aa9.95□□□□□ -0.82
PTPRN2-202ENST00000389416 DSCAML1Q8TD84 2053 aa9.95□□□□□ -0.82
PTPRN2-202ENST00000389416 DLEU1O43261 78 aa9.95□□□□□ -0.82
PTPRN2-202ENST00000389416 WDFY4Q6ZS81 3184 aa9.95□□□□□ -0.82
PTPRN2-202ENST00000389416 PSMG3-AS1Q96PY0 264 aa9.95□□□□□ -0.82
PTPRN2-202ENST00000389416 FRMD6-AS1P0C7T7 363 aa9.95□□□□□ -0.82
PTPRN2-202ENST00000389416 PSMB8P28062 276 aa9.95□□□□□ -0.82
PTPRN2-202ENST00000389416 PMVKQ15126 192 aa9.95□□□□□ -0.82
PTPRN2-202ENST00000389416 C20orf78Q9BR46 151 aa9.95□□□□□ -0.82
PTPRN2-202ENST00000389416 DEFB114Q30KQ6 69 aa9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 CLPSL2Q6UWE3 100 aa9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 NDUFA11Q86Y39 141 aa9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 Q6ZWC4 215 aa9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 MDFICQ9P1T7 246 aa9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 ANGP03950 147 aaKnown RBP9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 INSL3P51460 131 aa9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 ZNF80P51504 273 aaPredicted RBP9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 RNF152Q8N8N0 203 aa9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 SMAD5-AS1Q9Y6J3 95 aa9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 K7EQG2 157 aa9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 C18orf65Q6ZTR6 163 aa9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 ZNF664Q8N3J9 261 aa9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 ORAOV1Q8WV07 137 aa9.94□□□□□ -0.82
PTPRN2-202ENST00000389416 TMEM238C9JI98 176 aa9.93□□□□□ -0.82
PTPRN2-202ENST00000389416 C16orf74Q96GX8 76 aa9.93□□□□□ -0.82
PTPRN2-202ENST00000389416 MRPL35Q9NZE8 188 aaKnown RBP9.93□□□□□ -0.82
PTPRN2-202ENST00000389416 SPART-AS1P0CW21 52 aa9.93□□□□□ -0.82
PTPRN2-202ENST00000389416 HILS1P60008 231 aa9.93□□□□□ -0.82
PTPRN2-202ENST00000389416 LINC00322Q6ZN03 302 aaPredicted RBP9.93□□□□□ -0.82
PTPRN2-202ENST00000389416 TNRC6BQ9UPQ9 1833 aaKnown RBP9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 LGALS9O00182 355 aa9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 SUMO4Q6EEV6 95 aa9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 TMEM141Q96I45 108 aa9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 NAA38Q9BRA0 125 aaKnown RBP9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 IGKV2-29A2NJV5 120 aaPredicted RBP9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 RBMY1BA6NDE4 496 aaKnown RBP9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 RBMY1EA6NEQ0 496 aaKnown RBP9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 RBMY1DP0C7P1 496 aaKnown RBP9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 RBMY1A1P0DJD3 496 aaKnown RBP9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 RBMY1CP0DJD4 496 aa9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 HSD52Q0P140 79 aa9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 POLR3KQ9Y2Y1 108 aaPredicted RBP9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 SPCS1Q9Y6A9 102 aa9.92□□□□□ -0.82
PTPRN2-202ENST00000389416 JPT2Q9H910 190 aa9.91□□□□□ -0.82
PTPRN2-202ENST00000389416 GYPEP15421 78 aa9.91□□□□□ -0.82
PTPRN2-202ENST00000389416 MPV17L2Q567V2 206 aa9.91□□□□□ -0.82
PTPRN2-202ENST00000389416 MBD6Q96DN6 1003 aa9.91□□□□□ -0.82
PTPRN2-202ENST00000389416 ATP5G1P05496 136 aa9.91□□□□□ -0.82
PTPRN2-202ENST00000389416 ESDP10768 282 aa9.91□□□□□ -0.82
PTPRN2-202ENST00000389416 MYMXA0A1B0GTQ4 84 aa9.91□□□□□ -0.82
PTPRN2-202ENST00000389416 MGAQ8IWI9 3026 aa9.9□□□□□ -0.82
PTPRN2-202ENST00000389416 C19orf71A6NCJ1 209 aa9.9□□□□□ -0.82
PTPRN2-202ENST00000389416 Q6ZQT7 251 aa9.9□□□□□ -0.82
PTPRN2-202ENST00000389416 C20orf173Q96LM9 149 aa9.9□□□□□ -0.82
PTPRN2-202ENST00000389416 S100A7L2Q5SY68 101 aa9.9□□□□□ -0.83
PTPRN2-202ENST00000389416 PCSK5Q92824 1860 aa9.89□□□□□ -0.83
PTPRN2-202ENST00000389416 H3BMM0 161 aa9.89□□□□□ -0.83
PTPRN2-202ENST00000389416 IGLV2-8P01709 118 aa9.89□□□□□ -0.83
PTPRN2-202ENST00000389416 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
PTPRN2-202ENST00000389416 F8VRH5 84 aa9.89□□□□□ -0.83
PTPRN2-202ENST00000389416 IGLL1P15814 213 aa9.89□□□□□ -0.83
PTPRN2-202ENST00000389416 PAX2Q02962 417 aa9.89□□□□□ -0.83
PTPRN2-202ENST00000389416 PFN2P35080 140 aa9.88□□□□□ -0.83
PTPRN2-202ENST00000389416 KIR3DS1Q14943 382 aa9.88□□□□□ -0.83
PTPRN2-202ENST00000389416 IGLV1-40P01703 118 aa9.88□□□□□ -0.83
PTPRN2-202ENST00000389416 DKK2Q9UBU2 259 aa9.88□□□□□ -0.83
PTPRN2-202ENST00000389416 A0A1B0GWB2 263 aa9.88□□□□□ -0.83
PTPRN2-202ENST00000389416 ZNF561-AS1K7EIQ3 104 aa9.88□□□□□ -0.83
PTPRN2-202ENST00000389416 NUPR1O60356 82 aa9.88□□□□□ -0.83
PTPRN2-202ENST00000389416 TTC32Q5I0X7 151 aa9.88□□□□□ -0.83
PTPRN2-202ENST00000389416 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.88□□□□□ -0.83
PTPRN2-202ENST00000389416 LINC00482Q8N8I6 264 aa9.87□□□□□ -0.83
PTPRN2-202ENST00000389416 ZNF747Q9BV97 191 aa9.87□□□□□ -0.83
PTPRN2-202ENST00000389416 TP53TG3Q9ULZ0 132 aa9.87□□□□□ -0.83
PTPRN2-202ENST00000389416 TRBV6-1A0A0K0K1D8 114 aa9.87□□□□□ -0.83
PTPRN2-202ENST00000389416 CTRLP40313 264 aa9.87□□□□□ -0.83
PTPRN2-202ENST00000389416 ATP6V0E2Q8NHE4 81 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms