RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 A0A1W2PRX2 142 aa10.09□□□□□ -0.79
TRAPPC9-201ENST00000389328 IGHV1-69DA0A0B4J2H0 117 aa10.08□□□□□ -0.8
TRAPPC9-201ENST00000389328 TET2Q6N021 2002 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC9-201ENST00000389328 TRGV1A0A0A0MS02 117 aa10.08□□□□□ -0.8
TRAPPC9-201ENST00000389328 TCL1BO95988 128 aa10.08□□□□□ -0.8
TRAPPC9-201ENST00000389328 EDA2RQ9HAV5 297 aa10.08□□□□□ -0.8
TRAPPC9-201ENST00000389328 CENPVL3A0A0U1RRI6 287 aa10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 IGF1P05019 195 aa10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 C9orf47Q6ZRZ4 202 aa10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 OPRPNQ99935 248 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 CEP295Q9C0D2 2601 aa10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 IGHV7-4-1A0A0J9YVY3 117 aa10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 NDUFA11Q86Y39 141 aa10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 UBE2E2Q96LR5 201 aa10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 C11orf68Q9H3H3 251 aaKnown RBP10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 C9orf153Q5TBE3 101 aa10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 Q6ZUT4 128 aa10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 RASL10AQ92737 203 aa10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 RNF183Q96D59 192 aa10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 CRPP02741 224 aa10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 ZNF415Q09FC8 603 aa10.07□□□□□ -0.8
TRAPPC9-201ENST00000389328 A0A096LNJ9 63 aa10.06□□□□□ -0.8
TRAPPC9-201ENST00000389328 IGHV1-69P01742 117 aa10.06□□□□□ -0.8
TRAPPC9-201ENST00000389328 STHQ8IWL8 128 aa10.06□□□□□ -0.8
TRAPPC9-201ENST00000389328 CHD9Q3L8U1 2897 aa10.06□□□□□ -0.8
TRAPPC9-201ENST00000389328 SMIM20Q8N5G0 67 aa10.06□□□□□ -0.8
TRAPPC9-201ENST00000389328 SMAD5-AS1Q9Y6J3 95 aa10.06□□□□□ -0.8
TRAPPC9-201ENST00000389328 PAX4O43316 350 aa10.06□□□□□ -0.8
TRAPPC9-201ENST00000389328 LINC01620Q4KN68 170 aa10.06□□□□□ -0.8
TRAPPC9-201ENST00000389328 LINC01548A6NM66 108 aa10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 C16orf54Q6UWD8 224 aa10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 RBMY1BA6NDE4 496 aaKnown RBP10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 RBMY1EA6NEQ0 496 aaKnown RBP10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 LEPROTO15243 131 aa10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 RBMY1DP0C7P1 496 aaKnown RBP10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 RBMY1A1P0DJD3 496 aaKnown RBP10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 RBMY1CP0DJD4 496 aa10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 SETD2Q9BYW2 2564 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 ZFP36P26651 326 aaKnown RBP10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 RPL36AP83881 106 aaKnown RBP10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 UNQ9165/PRO28630Q6UXU0 137 aa10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 C3orf56Q8N813 242 aa10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 RPL36ALQ969Q0 106 aaKnown RBP10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 CHCHD5Q9BSY4 110 aa10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 CFAP54Q96N23 3096 aa10.05□□□□□ -0.8
TRAPPC9-201ENST00000389328 HIST1H4AP62805 103 aaKnown RBP10.04□□□□□ -0.8
TRAPPC9-201ENST00000389328 PEMTQ9UBM1 199 aa10.04□□□□□ -0.8
TRAPPC9-201ENST00000389328 HHLA3Q9XRX5 114 aa10.04□□□□□ -0.8
TRAPPC9-201ENST00000389328 TLN2Q9Y4G6 2542 aa10.04□□□□□ -0.8
TRAPPC9-201ENST00000389328 FSTL3O95633 263 aa10.04□□□□□ -0.8
TRAPPC9-201ENST00000389328 PRSS47A8MTI9 375 aa10.04□□□□□ -0.8
TRAPPC9-201ENST00000389328 RS1O15537 224 aa10.04□□□□□ -0.8
TRAPPC9-201ENST00000389328 SRSF2Q01130 221 aaKnown RBP10.04□□□□□ -0.8
TRAPPC9-201ENST00000389328 DAND5Q8N907 189 aa10.03□□□□□ -0.8
TRAPPC9-201ENST00000389328 C11orf21Q9P2W6 132 aa10.03□□□□□ -0.8
TRAPPC9-201ENST00000389328 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC9-201ENST00000389328 IGKV2-29A2NJV5 120 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC9-201ENST00000389328 TRBV12-3P01733 135 aa10.03□□□□□ -0.8
TRAPPC9-201ENST00000389328 NEXN-AS1Q8NBZ9 246 aa10.03□□□□□ -0.8
TRAPPC9-201ENST00000389328 ATP6V0E2Q8NHE4 81 aa10.03□□□□□ -0.8
TRAPPC9-201ENST00000389328 CHD8Q9HCK8 2581 aa10.03□□□□□ -0.8
TRAPPC9-201ENST00000389328 CCDC140Q96MF4 163 aa10.03□□□□□ -0.8
TRAPPC9-201ENST00000389328 TRGV4A0A0C4DH28 118 aa10.02□□□□□ -0.8
TRAPPC9-201ENST00000389328 BLCAPP62952 87 aa10.02□□□□□ -0.8
TRAPPC9-201ENST00000389328 RHOHQ15669 191 aa10.02□□□□□ -0.8
TRAPPC9-201ENST00000389328 XCL2Q9UBD3 114 aa10.02□□□□□ -0.8
TRAPPC9-201ENST00000389328 CLUHP3Q96NS8 147 aa10.02□□□□□ -0.81
TRAPPC9-201ENST00000389328 TCTEX1D4Q5JR98 221 aa10.01□□□□□ -0.81
TRAPPC9-201ENST00000389328 K7ENP7 123 aa10.01□□□□□ -0.81
TRAPPC9-201ENST00000389328 Q6ZQT7 251 aa10.01□□□□□ -0.81
TRAPPC9-201ENST00000389328 ZNRF2Q8NHG8 242 aa10.01□□□□□ -0.81
TRAPPC9-201ENST00000389328 AJUBAQ96IF1 538 aa10.01□□□□□ -0.81
TRAPPC9-201ENST00000389328 PIFOQ8TCI5 191 aa10□□□□□ -0.81
TRAPPC9-201ENST00000389328 TIMM17AQ99595 171 aa10□□□□□ -0.81
TRAPPC9-201ENST00000389328 NRACQ8N912 160 aa10□□□□□ -0.81
TRAPPC9-201ENST00000389328 CLEC2BQ92478 149 aa10□□□□□ -0.81
TRAPPC9-201ENST00000389328 ICOSQ9Y6W8 199 aa10□□□□□ -0.81
TRAPPC9-201ENST00000389328 Q8N1Y9 231 aa9.99□□□□□ -0.81
TRAPPC9-201ENST00000389328 HIVEP3Q5T1R4 2406 aa9.99□□□□□ -0.81
TRAPPC9-201ENST00000389328 A0A0J9YY99 117 aa9.99□□□□□ -0.81
TRAPPC9-201ENST00000389328 B4DSR2 109 aa9.99□□□□□ -0.81
TRAPPC9-201ENST00000389328 MAPK1IP1LQ8NDC0 245 aa9.99□□□□□ -0.81
TRAPPC9-201ENST00000389328 MDFICQ9P1T7 246 aa9.99□□□□□ -0.81
TRAPPC9-201ENST00000389328 C5orf56Q8N8D9 126 aa9.99□□□□□ -0.81
TRAPPC9-201ENST00000389328 Q9H8V8 135 aa9.99□□□□□ -0.81
TRAPPC9-201ENST00000389328 LY6LH3BQJ8 138 aa9.99□□□□□ -0.81
TRAPPC9-201ENST00000389328 AGRNO00468 2067 aa9.99□□□□□ -0.81
TRAPPC9-201ENST00000389328 PFN2P35080 140 aa9.98□□□□□ -0.81
TRAPPC9-201ENST00000389328 INSP01308 110 aa9.98□□□□□ -0.81
TRAPPC9-201ENST00000389328 CEMP1Q6PRD7 247 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC9-201ENST00000389328 TNRC6BQ9UPQ9 1833 aaKnown RBP9.98□□□□□ -0.81
TRAPPC9-201ENST00000389328 TEX49A0A1B0GTD5 131 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 COX6B1P14854 86 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 GNLYP22749 145 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 SPATA25Q9BR10 227 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 RHODO00212 210 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 C20orf173Q96LM9 149 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 ZFAND3Q9H8U3 227 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 TRBV7-3A0A075B6L6 115 aa9.97□□□□□ -0.81
TRAPPC9-201ENST00000389328 MRPS12O15235 138 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms