RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 IGLV1-47P01700 117 aa9.34□□□□□ -0.91
SHOX-203ENST00000381578 CRIP2P52943 208 aaPredicted RBP9.34□□□□□ -0.91
SHOX-203ENST00000381578 NDUFV3P56181 108 aaKnown RBP9.34□□□□□ -0.91
SHOX-203ENST00000381578 PAPPA-AS1Q5QFB9 102 aa9.34□□□□□ -0.91
SHOX-203ENST00000381578 DMXL1Q9Y485 3027 aa9.34□□□□□ -0.91
SHOX-203ENST00000381578 PMVKQ15126 192 aa9.34□□□□□ -0.92
SHOX-203ENST00000381578 PKD1L2Q7Z442 2459 aa9.33□□□□□ -0.92
SHOX-203ENST00000381578 CFAP161Q6P656 301 aa9.33□□□□□ -0.92
SHOX-203ENST00000381578 CARD19Q96LW7 228 aa9.33□□□□□ -0.92
SHOX-203ENST00000381578 CITED1Q99966 193 aa9.33□□□□□ -0.92
SHOX-203ENST00000381578 TRBV7-9A0A0J9YWB2 115 aa9.33□□□□□ -0.92
SHOX-203ENST00000381578 SDHAF1A6NFY7 115 aa9.33□□□□□ -0.92
SHOX-203ENST00000381578 FCN3O75636 299 aa9.33□□□□□ -0.92
SHOX-203ENST00000381578 MUSTN1Q8IVN3 82 aa9.33□□□□□ -0.92
SHOX-203ENST00000381578 SMAD5-AS1Q9Y6J3 95 aa9.33□□□□□ -0.92
SHOX-203ENST00000381578 B9A039 149 aa9.33□□□□□ -0.92
SHOX-203ENST00000381578 NUP37Q8NFH4 326 aa9.33□□□□□ -0.92
SHOX-203ENST00000381578 AKAP13Q12802 2813 aa9.32□□□□□ -0.92
SHOX-203ENST00000381578 RBAKDNA6NC62 111 aa9.32□□□□□ -0.92
SHOX-203ENST00000381578 ATP6V0E1O15342 81 aa9.32□□□□□ -0.92
SHOX-203ENST00000381578 VMO1Q7Z5L0 202 aa9.32□□□□□ -0.92
SHOX-203ENST00000381578 ADGRG4Q8IZF6 3080 aa9.32□□□□□ -0.92
SHOX-203ENST00000381578 IGLV11-55A0A075B6I3 123 aa9.32□□□□□ -0.92
SHOX-203ENST00000381578 Q8N1Y9 231 aa9.32□□□□□ -0.92
SHOX-203ENST00000381578 RASL10AQ92737 203 aa9.32□□□□□ -0.92
SHOX-203ENST00000381578 M0R2P5 195 aa9.32□□□□□ -0.92
SHOX-203ENST00000381578 SHISA2Q6UWI4 295 aa9.32□□□□□ -0.92
SHOX-203ENST00000381578 ZMAT4Q9H898 229 aa9.32□□□□□ -0.92
SHOX-203ENST00000381578 PRO0461Q9UI25 63 aa9.32□□□□□ -0.92
SHOX-203ENST00000381578 MRPL23Q16540 153 aaKnown RBP9.31□□□□□ -0.92
SHOX-203ENST00000381578 ZNF876PQ49A33 203 aa9.31□□□□□ -0.92
SHOX-203ENST00000381578 GATD1Q8NB37 220 aa9.31□□□□□ -0.92
SHOX-203ENST00000381578 ATP6V0E2Q8NHE4 81 aa9.31□□□□□ -0.92
SHOX-203ENST00000381578 NRACQ8N912 160 aa9.31□□□□□ -0.92
SHOX-203ENST00000381578 CHCHD5Q9BSY4 110 aa9.31□□□□□ -0.92
SHOX-203ENST00000381578 CD28P10747 220 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 HOXB4P17483 251 aaPredicted RBP9.3□□□□□ -0.92
SHOX-203ENST00000381578 MRGPRG-AS1Q2M3A8 158 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 Q8NA96 180 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 VCYO14598 125 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 LAMA5O15230 3695 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 CRLF1O75462 422 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 FN1P02751 2386 aaKnown RBP9.3□□□□□ -0.92
SHOX-203ENST00000381578 PAX8Q06710 450 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 LINC01620Q4KN68 170 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 A0A0J9YY99 117 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 BUB3O43684 328 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 PPP1R17O96001 155 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 FHL3Q13643 280 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 DAND5Q8N907 189 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 TOMM6Q96B49 74 aa9.3□□□□□ -0.92
SHOX-203ENST00000381578 CRYGBP07316 175 aa9.29□□□□□ -0.92
SHOX-203ENST00000381578 C9orf153Q5TBE3 101 aa9.29□□□□□ -0.92
SHOX-203ENST00000381578 NEXN-AS1Q8NBZ9 246 aa9.29□□□□□ -0.92
SHOX-203ENST00000381578 CLEC2BQ92478 149 aa9.29□□□□□ -0.92
SHOX-203ENST00000381578 RNF5Q99942 180 aa9.29□□□□□ -0.92
SHOX-203ENST00000381578 A0A0J9YXV3 536 aa9.29□□□□□ -0.92
SHOX-203ENST00000381578 DUX5Q96PT3 197 aa9.29□□□□□ -0.92
SHOX-203ENST00000381578 FLNBO75369 2602 aaKnown RBP9.29□□□□□ -0.92
SHOX-203ENST00000381578 TRAV12-2A0A075B6T6 113 aa9.28□□□□□ -0.92
SHOX-203ENST00000381578 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.28□□□□□ -0.92
SHOX-203ENST00000381578 TRAV12-1A0A0B4J245 112 aa9.28□□□□□ -0.92
SHOX-203ENST00000381578 MRPS12O15235 138 aaKnown RBP9.28□□□□□ -0.92
SHOX-203ENST00000381578 AJUBAQ96IF1 538 aa9.28□□□□□ -0.92
SHOX-203ENST00000381578 RPL32P62910 135 aaKnown RBP9.28□□□□□ -0.92
SHOX-203ENST00000381578 KNCNA6PVL3 124 aa9.27□□□□□ -0.92
SHOX-203ENST00000381578 EDA2RQ9HAV5 297 aa9.27□□□□□ -0.92
SHOX-203ENST00000381578 THBDP07204 575 aa9.27□□□□□ -0.93
SHOX-203ENST00000381578 PIFOQ8TCI5 191 aa9.27□□□□□ -0.93
SHOX-203ENST00000381578 IGKV3OR2-268A0A0C4DH90 116 aa9.27□□□□□ -0.93
SHOX-203ENST00000381578 TIMM21Q9BVV7 248 aa9.27□□□□□ -0.93
SHOX-203ENST00000381578 ZNF462Q96JM2 2506 aa9.27□□□□□ -0.93
SHOX-203ENST00000381578 DOPEY1Q5JWR5 2465 aa9.27□□□□□ -0.93
SHOX-203ENST00000381578 ATMQ13315 3056 aa9.27□□□□□ -0.93
SHOX-203ENST00000381578 GRNP28799 593 aaKnown RBP9.26□□□□□ -0.93
SHOX-203ENST00000381578 C8orf31Q8N9H6 132 aa9.26□□□□□ -0.93
SHOX-203ENST00000381578 KLK9Q9UKQ9 250 aa9.26□□□□□ -0.93
SHOX-203ENST00000381578 FAM236AA0A1B0GUQ0 79 aa9.26□□□□□ -0.93
SHOX-203ENST00000381578 FAM236BA0A1B0GV22 79 aa9.26□□□□□ -0.93
SHOX-203ENST00000381578 PRR9Q5T870 116 aa9.26□□□□□ -0.93
SHOX-203ENST00000381578 KAAG1Q9UBP8 84 aa9.26□□□□□ -0.93
SHOX-203ENST00000381578 ATP5J2P56134 94 aa9.25□□□□□ -0.93
SHOX-203ENST00000381578 IGHV7-81A0A0B4J1V7 117 aa9.25□□□□□ -0.93
SHOX-203ENST00000381578 IGHV7-4-1A0A0J9YVY3 117 aa9.25□□□□□ -0.93
SHOX-203ENST00000381578 C9orf139Q6ZV77 190 aa9.25□□□□□ -0.93
SHOX-203ENST00000381578 IGLV2-18A0A075B6J9 118 aa9.24□□□□□ -0.93
SHOX-203ENST00000381578 TSPEAR-AS2P59090 65 aa9.24□□□□□ -0.93
SHOX-203ENST00000381578 TMEM101Q96IK0 257 aa9.24□□□□□ -0.93
SHOX-203ENST00000381578 IGHV3OR16-12A0A075B7B8 117 aa9.24□□□□□ -0.93
SHOX-203ENST00000381578 UBE2D1P51668 147 aa9.24□□□□□ -0.93
SHOX-203ENST00000381578 SUMO4Q6EEV6 95 aa9.24□□□□□ -0.93
SHOX-203ENST00000381578 CEMP1Q6PRD7 247 aaPredicted RBP9.24□□□□□ -0.93
SHOX-203ENST00000381578 BRD3OSQ6XYD6 125 aa9.24□□□□□ -0.93
SHOX-203ENST00000381578 NDUFA12Q9UI09 145 aa9.24□□□□□ -0.93
SHOX-203ENST00000381578 ACANP16112 2415 aa9.23□□□□□ -0.93
SHOX-203ENST00000381578 Q6ZSV7 163 aa9.23□□□□□ -0.93
SHOX-203ENST00000381578 TNFRSF18Q9Y5U5 241 aa9.23□□□□□ -0.93
SHOX-203ENST00000381578 RNASE1P07998 156 aaKnown RBP9.23□□□□□ -0.93
SHOX-203ENST00000381578 RHODO00212 210 aa9.23□□□□□ -0.93
SHOX-203ENST00000381578 OVOL1O14753 267 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms