RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 HTN1P15515 57 aa11.25□□□□□ -0.61
RAB3IP-204ENST00000378815 C20orf78Q9BR46 151 aa11.25□□□□□ -0.61
RAB3IP-204ENST00000378815 VAMP8Q9BV40 100 aa11.25□□□□□ -0.61
RAB3IP-204ENST00000378815 A0A087WWL8 130 aa11.24□□□□□ -0.61
RAB3IP-204ENST00000378815 RPL39LQ96EH5 51 aaKnown RBP11.24□□□□□ -0.61
RAB3IP-204ENST00000378815 LINC01587Q99440 93 aa11.24□□□□□ -0.61
RAB3IP-204ENST00000378815 ZNF876PQ49A33 203 aa11.24□□□□□ -0.61
RAB3IP-204ENST00000378815 CITED1Q99966 193 aa11.24□□□□□ -0.61
RAB3IP-204ENST00000378815 XCL2Q9UBD3 114 aa11.24□□□□□ -0.61
RAB3IP-204ENST00000378815 PPP1R17O96001 155 aa11.23□□□□□ -0.61
RAB3IP-204ENST00000378815 PRM2P04554 102 aa11.23□□□□□ -0.61
RAB3IP-204ENST00000378815 CRYGDP07320 174 aa11.23□□□□□ -0.61
RAB3IP-204ENST00000378815 SUMO2P61956 95 aaKnown RBP11.23□□□□□ -0.61
RAB3IP-204ENST00000378815 PET117Q6UWS5 81 aa11.23□□□□□ -0.61
RAB3IP-204ENST00000378815 SMIM2Q9BVW6 85 aa11.23□□□□□ -0.61
RAB3IP-204ENST00000378815 FCER1GP30273 86 aa11.23□□□□□ -0.61
RAB3IP-204ENST00000378815 NUTF2P61970 127 aaKnown RBP11.23□□□□□ -0.61
RAB3IP-204ENST00000378815 PAM16Q9Y3D7 125 aa11.23□□□□□ -0.61
RAB3IP-204ENST00000378815 DDTP30046 118 aa11.22□□□□□ -0.61
RAB3IP-204ENST00000378815 SUMO4Q6EEV6 95 aa11.22□□□□□ -0.61
RAB3IP-204ENST00000378815 WFDC10AQ9H1F0 79 aa11.22□□□□□ -0.61
RAB3IP-204ENST00000378815 F8P00451 2351 aa11.22□□□□□ -0.61
RAB3IP-204ENST00000378815 NIPBLQ6KC79 2804 aaeCLIP11.22□□□□□ -0.61
RAB3IP-204ENST00000378815 ZNF415Q09FC8 603 aa11.21□□□□□ -0.61
RAB3IP-204ENST00000378815 C1orf158Q8N1D5 194 aa11.21□□□□□ -0.61
RAB3IP-204ENST00000378815 C11orf72Q8NBR9 251 aa11.21□□□□□ -0.61
RAB3IP-204ENST00000378815 C20orf202A1L168 122 aa11.21□□□□□ -0.62
RAB3IP-204ENST00000378815 ATOH7Q8N100 152 aa11.21□□□□□ -0.62
RAB3IP-204ENST00000378815 LAGE3Q14657 143 aa11.2□□□□□ -0.62
RAB3IP-204ENST00000378815 PIK3CD-AS1Q5SR53 167 aa11.2□□□□□ -0.62
RAB3IP-204ENST00000378815 FAM74A4Q5TZK3 123 aa11.2□□□□□ -0.62
RAB3IP-204ENST00000378815 PTH2Q96A98 100 aa11.2□□□□□ -0.62
RAB3IP-204ENST00000378815 M0R2P5 195 aa11.2□□□□□ -0.62
RAB3IP-204ENST00000378815 TCAPO15273 167 aa11.2□□□□□ -0.62
RAB3IP-204ENST00000378815 GIG44P09565 113 aaPredicted RBP11.2□□□□□ -0.62
RAB3IP-204ENST00000378815 LINC01545Q5VT33 79 aa11.2□□□□□ -0.62
RAB3IP-204ENST00000378815 TMEM158Q8WZ71 300 aa11.2□□□□□ -0.62
RAB3IP-204ENST00000378815 F5H697 171 aa11.19□□□□□ -0.62
RAB3IP-204ENST00000378815 INSL3P51460 131 aa11.19□□□□□ -0.62
RAB3IP-204ENST00000378815 SPATA3Q8NHX4 192 aa11.19□□□□□ -0.62
RAB3IP-204ENST00000378815 RPL32P62910 135 aaKnown RBP11.19□□□□□ -0.62
RAB3IP-204ENST00000378815 H0Y8G0 127 aa11.18□□□□□ -0.62
RAB3IP-204ENST00000378815 K7EMI3 77 aa11.18□□□□□ -0.62
RAB3IP-204ENST00000378815 IFI27L1Q96BM0 104 aa11.18□□□□□ -0.62
RAB3IP-204ENST00000378815 TMEM208Q9BTX3 173 aa11.18□□□□□ -0.62
RAB3IP-204ENST00000378815 MCRIP2Q9BUT9 160 aaKnown RBP11.18□□□□□ -0.62
RAB3IP-204ENST00000378815 TRAV9-2A0A087WT02 112 aa11.18□□□□□ -0.62
RAB3IP-204ENST00000378815 M0QY20 66 aa11.18□□□□□ -0.62
RAB3IP-204ENST00000378815 ZNF56Q15929 161 aa11.18□□□□□ -0.62
RAB3IP-204ENST00000378815 MAJINQ3KP22 176 aa11.18□□□□□ -0.62
RAB3IP-204ENST00000378815 SPATA45Q537H7 98 aa11.18□□□□□ -0.62
RAB3IP-204ENST00000378815 SPXQ9BT56 116 aa11.18□□□□□ -0.62
RAB3IP-204ENST00000378815 ST20Q9HBF5 79 aa11.18□□□□□ -0.62
RAB3IP-204ENST00000378815 AZU1P20160 251 aa11.17□□□□□ -0.62
RAB3IP-204ENST00000378815 C9orf66Q5T8R8 295 aa11.17□□□□□ -0.62
RAB3IP-204ENST00000378815 CSTL1Q9H114 145 aa11.17□□□□□ -0.62
RAB3IP-204ENST00000378815 TRBV6-5A0A0K0K1A5 114 aa11.17□□□□□ -0.62
RAB3IP-204ENST00000378815 ZNF705AQ6ZN79 300 aaPredicted RBP11.17□□□□□ -0.62
RAB3IP-204ENST00000378815 A8MWV9 139 aa11.16□□□□□ -0.62
RAB3IP-204ENST00000378815 RPL35AP18077 110 aaKnown RBP11.16□□□□□ -0.62
RAB3IP-204ENST00000378815 POLR2KP53803 58 aaKnown RBP11.16□□□□□ -0.62
RAB3IP-204ENST00000378815 ORMDL2Q53FV1 153 aa11.16□□□□□ -0.62
RAB3IP-204ENST00000378815 UFSP1Q6NVU6 142 aa11.16□□□□□ -0.62
RAB3IP-204ENST00000378815 IGHV3OR16-12A0A075B7B8 117 aa11.16□□□□□ -0.62
RAB3IP-204ENST00000378815 IL17DQ8TAD2 202 aa11.16□□□□□ -0.62
RAB3IP-204ENST00000378815 C18orf15Q96N68 181 aa11.16□□□□□ -0.62
RAB3IP-204ENST00000378815 MORN3Q6PF18 240 aaPredicted RBP11.15□□□□□ -0.62
RAB3IP-204ENST00000378815 RNASE8Q8TDE3 154 aaKnown RBP11.15□□□□□ -0.62
RAB3IP-204ENST00000378815 NDUFAF3Q9BU61 184 aa11.15□□□□□ -0.62
RAB3IP-204ENST00000378815 NUDT3O95989 172 aa11.14□□□□□ -0.63
RAB3IP-204ENST00000378815 LGALS9BQ3B8N2 356 aa11.14□□□□□ -0.63
RAB3IP-204ENST00000378815 LGALS9CQ6DKI2 356 aa11.14□□□□□ -0.63
RAB3IP-204ENST00000378815 PMCHL2Q9BQD1 86 aa11.14□□□□□ -0.63
RAB3IP-204ENST00000378815 EDA2RQ9HAV5 297 aa11.14□□□□□ -0.63
RAB3IP-204ENST00000378815 CSNK1G2-AS1Q8NCQ2 148 aa11.14□□□□□ -0.63
RAB3IP-204ENST00000378815 MIEN1Q9BRT3 115 aa11.14□□□□□ -0.63
RAB3IP-204ENST00000378815 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
RAB3IP-204ENST00000378815 JMJD1CQ15652 2540 aa11.14□□□□□ -0.63
RAB3IP-204ENST00000378815 SDHAF1A6NFY7 115 aa11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 VCYO14598 125 aa11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 IGLL1P15814 213 aa11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 DEFA6Q01524 100 aa11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 CFAP126Q5VTH2 177 aa11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 GOLT1BQ9Y3E0 138 aa11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 TENM1Q9UKZ4 2725 aa11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 TRBV27A0A0K0K1C4 114 aa11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 ATP5LO75964 103 aa11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 NEGR1Q7Z3B1 354 aa11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 GTSCR1Q86UQ5 136 aa11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 TMEM263Q8WUH6 116 aaKnown RBP11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 C14orf144Q96I85 54 aa11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 MRPL16Q9NX20 251 aaKnown RBP11.13□□□□□ -0.63
RAB3IP-204ENST00000378815 IGLC3P0DOY3 106 aa11.12□□□□□ -0.63
RAB3IP-204ENST00000378815 TOMM6Q96B49 74 aa11.12□□□□□ -0.63
RAB3IP-204ENST00000378815 hDV102S1A0JD36 115 aa11.12□□□□□ -0.63
RAB3IP-204ENST00000378815 CYSRT1A8MQ03 144 aa11.12□□□□□ -0.63
RAB3IP-204ENST00000378815 WFDC9Q8NEX5 89 aa11.11□□□□□ -0.63
RAB3IP-204ENST00000378815 IGHV3-73A0A0B4J1V6 119 aa11.11□□□□□ -0.63
RAB3IP-204ENST00000378815 H7C1H1 209 aa11.11□□□□□ -0.63
RAB3IP-204ENST00000378815 RS1O15537 224 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms