RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 C20orf78Q9BR46 151 aa10.94□□□□□ -0.66
TRIM13-202ENST00000378182 POLR3KQ9Y2Y1 108 aaPredicted RBP10.94□□□□□ -0.66
TRIM13-202ENST00000378182 C9orf118A6NHY6 69 aa10.93□□□□□ -0.66
TRIM13-202ENST00000378182 FAM231DQ6ZW35 169 aa10.93□□□□□ -0.66
TRIM13-202ENST00000378182 CRYGDP07320 174 aa10.93□□□□□ -0.66
TRIM13-202ENST00000378182 TMEM258P61165 79 aa10.93□□□□□ -0.66
TRIM13-202ENST00000378182 SPAG11BQ08648 103 aa10.93□□□□□ -0.66
TRIM13-202ENST00000378182 ZNF726P1Q15940 193 aa10.93□□□□□ -0.66
TRIM13-202ENST00000378182 MYCNOSP40205 109 aa10.93□□□□□ -0.66
TRIM13-202ENST00000378182 GAGE12HA6NDE8 117 aa10.93□□□□□ -0.66
TRIM13-202ENST00000378182 ZNF524Q96C55 264 aa10.93□□□□□ -0.66
TRIM13-202ENST00000378182 A0A1B0GX51 115 aa10.93□□□□□ -0.66
TRIM13-202ENST00000378182 SPTAN1Q13813 2472 aaKnown RBP10.93□□□□□ -0.66
TRIM13-202ENST00000378182 TRBV12-3P01733 135 aa10.93□□□□□ -0.66
TRIM13-202ENST00000378182 IGLC7A0M8Q6 106 aa10.92□□□□□ -0.66
TRIM13-202ENST00000378182 RBAKDNA6NC62 111 aa10.92□□□□□ -0.66
TRIM13-202ENST00000378182 ACYP1P07311 99 aa10.92□□□□□ -0.66
TRIM13-202ENST00000378182 IGLC2P0DOY2 106 aa10.92□□□□□ -0.66
TRIM13-202ENST00000378182 IGLC3P0DOY3 106 aa10.92□□□□□ -0.66
TRIM13-202ENST00000378182 DSCAMO60469 2012 aa10.92□□□□□ -0.66
TRIM13-202ENST00000378182 ANKRD39Q53RE8 183 aa10.92□□□□□ -0.66
TRIM13-202ENST00000378182 HIGD2AQ9BW72 106 aa10.92□□□□□ -0.66
TRIM13-202ENST00000378182 LECT2O14960 151 aa10.92□□□□□ -0.66
TRIM13-202ENST00000378182 HILS1P60008 231 aa10.92□□□□□ -0.66
TRIM13-202ENST00000378182 MAJINQ3KP22 176 aa10.91□□□□□ -0.66
TRIM13-202ENST00000378182 RPL39P62891 51 aaKnown RBP10.91□□□□□ -0.66
TRIM13-202ENST00000378182 KIAA1549LQ6ZVL6 1849 aa10.91□□□□□ -0.66
TRIM13-202ENST00000378182 PPDPFLQ8WWR9 84 aa10.91□□□□□ -0.66
TRIM13-202ENST00000378182 KAAG1Q9UBP8 84 aa10.91□□□□□ -0.66
TRIM13-202ENST00000378182 PLA2G5P39877 138 aa10.91□□□□□ -0.66
TRIM13-202ENST00000378182 MP68P56378 58 aa10.91□□□□□ -0.66
TRIM13-202ENST00000378182 UBE2D4Q9Y2X8 147 aa10.9□□□□□ -0.66
TRIM13-202ENST00000378182 DLEU1O43261 78 aa10.9□□□□□ -0.66
TRIM13-202ENST00000378182 SPANXA1Q9NS26 97 aa10.9□□□□□ -0.66
TRIM13-202ENST00000378182 LGALS9BQ3B8N2 356 aa10.9□□□□□ -0.67
TRIM13-202ENST00000378182 LGALS9CQ6DKI2 356 aa10.9□□□□□ -0.67
TRIM13-202ENST00000378182 C16orf54Q6UWD8 224 aa10.9□□□□□ -0.67
TRIM13-202ENST00000378182 Q8N9W7 124 aa10.9□□□□□ -0.67
TRIM13-202ENST00000378182 DEFB131BA0A096LNP1 70 aa10.89□□□□□ -0.67
TRIM13-202ENST00000378182 TMEM61Q8N0U2 210 aa10.89□□□□□ -0.67
TRIM13-202ENST00000378182 OPRPNQ99935 248 aaPredicted RBP10.89□□□□□ -0.67
TRIM13-202ENST00000378182 K7EN84 100 aa10.89□□□□□ -0.67
TRIM13-202ENST00000378182 ZNF493Q6ZR52 646 aa10.89□□□□□ -0.67
TRIM13-202ENST00000378182 NTN5Q8WTR8 489 aaPredicted RBP10.89□□□□□ -0.67
TRIM13-202ENST00000378182 NPSP0C0P6 89 aa10.89□□□□□ -0.67
TRIM13-202ENST00000378182 CCL25O15444 150 aa10.88□□□□□ -0.67
TRIM13-202ENST00000378182 COX8AP10176 69 aa10.88□□□□□ -0.67
TRIM13-202ENST00000378182 Q0VG73 95 aa10.88□□□□□ -0.67
TRIM13-202ENST00000378182 ETDBQ3ZM63 59 aa10.88□□□□□ -0.67
TRIM13-202ENST00000378182 TEX22C9J3V5 150 aa10.88□□□□□ -0.67
TRIM13-202ENST00000378182 LYL1P12980 280 aa10.88□□□□□ -0.67
TRIM13-202ENST00000378182 DIRC1Q969H9 104 aa10.88□□□□□ -0.67
TRIM13-202ENST00000378182 NDUFA11Q86Y39 141 aa10.88□□□□□ -0.67
TRIM13-202ENST00000378182 MUSTN1Q8IVN3 82 aa10.88□□□□□ -0.67
TRIM13-202ENST00000378182 LINC00482Q8N8I6 264 aa10.88□□□□□ -0.67
TRIM13-202ENST00000378182 SIRPDQ9H106 197 aa10.88□□□□□ -0.67
TRIM13-202ENST00000378182 IGKV1D-37A0A075B6S9 117 aa10.87□□□□□ -0.67
TRIM13-202ENST00000378182 RNF152Q8N8N0 203 aa10.87□□□□□ -0.67
TRIM13-202ENST00000378182 C12orf74Q32Q52 190 aa10.87□□□□□ -0.67
TRIM13-202ENST00000378182 LINC00269Q8N2A0 174 aa10.87□□□□□ -0.67
TRIM13-202ENST00000378182 FREM1Q5H8C1 2179 aa10.87□□□□□ -0.67
TRIM13-202ENST00000378182 A0A0J9YWU9 116 aa10.87□□□□□ -0.67
TRIM13-202ENST00000378182 PYY3Q5JQD4 70 aa10.87□□□□□ -0.67
TRIM13-202ENST00000378182 A0A1W2PPM0 123 aa10.87□□□□□ -0.67
TRIM13-202ENST00000378182 P0DMU3 169 aa10.87□□□□□ -0.67
TRIM13-202ENST00000378182 FAM231AP0DMU4 169 aa10.87□□□□□ -0.67
TRIM13-202ENST00000378182 FAM231CP0DMU5 169 aa10.87□□□□□ -0.67
TRIM13-202ENST00000378182 FAM19A1Q7Z5A9 133 aa10.87□□□□□ -0.67
TRIM13-202ENST00000378182 C11orf52Q96A22 123 aa10.87□□□□□ -0.67
TRIM13-202ENST00000378182 C9JQL5 133 aa10.86□□□□□ -0.67
TRIM13-202ENST00000378182 FOXI1Q12951 378 aa10.86□□□□□ -0.67
TRIM13-202ENST00000378182 FHL1Q13642 323 aa10.86□□□□□ -0.67
TRIM13-202ENST00000378182 C14orf177Q52M58 125 aa10.86□□□□□ -0.67
TRIM13-202ENST00000378182 FAM19A5Q7Z5A7 132 aaPredicted RBP10.86□□□□□ -0.67
TRIM13-202ENST00000378182 F8W1H4 67 aa10.86□□□□□ -0.67
TRIM13-202ENST00000378182 MDFICQ9P1T7 246 aa10.86□□□□□ -0.67
TRIM13-202ENST00000378182 PRAC2D3DTV9 90 aa10.86□□□□□ -0.67
TRIM13-202ENST00000378182 SVIPQ8NHG7 77 aa10.86□□□□□ -0.67
TRIM13-202ENST00000378182 RIF1Q5UIP0 2472 aaKnown RBP10.85□□□□□ -0.67
TRIM13-202ENST00000378182 NBASA2RRP1 2371 aa10.85□□□□□ -0.67
TRIM13-202ENST00000378182 ADCYAP1P18509 176 aa10.85□□□□□ -0.67
TRIM13-202ENST00000378182 PCP2Q8IVA1 136 aa10.85□□□□□ -0.67
TRIM13-202ENST00000378182 MALRD1Q5VYJ5 2156 aa10.85□□□□□ -0.67
TRIM13-202ENST00000378182 C11orf53Q8IXP5 236 aa10.85□□□□□ -0.67
TRIM13-202ENST00000378182 MSRB1Q9NZV6 116 aa10.85□□□□□ -0.67
TRIM13-202ENST00000378182 LY6G6DO95868 133 aa10.85□□□□□ -0.67
TRIM13-202ENST00000378182 CFC1BP0CG36 223 aa10.85□□□□□ -0.67
TRIM13-202ENST00000378182 CFC1P0CG37 223 aa10.85□□□□□ -0.67
TRIM13-202ENST00000378182 A0A0J9YXV3 536 aa10.85□□□□□ -0.67
TRIM13-202ENST00000378182 C19orf84I3L1E1 186 aa10.84□□□□□ -0.67
TRIM13-202ENST00000378182 NCOR1P1Q9H4R4 102 aa10.84□□□□□ -0.67
TRIM13-202ENST00000378182 I3L2K1 104 aa10.84□□□□□ -0.67
TRIM13-202ENST00000378182 IGHV4-31P0DP07 118 aa10.84□□□□□ -0.67
TRIM13-202ENST00000378182 RETNQ9HD89 108 aa10.84□□□□□ -0.67
TRIM13-202ENST00000378182 C7orf33Q8WU49 177 aa10.84□□□□□ -0.67
TRIM13-202ENST00000378182 RSPO1Q2MKA7 263 aaPredicted RBP10.84□□□□□ -0.67
TRIM13-202ENST00000378182 TMEM263Q8WUH6 116 aaKnown RBP10.84□□□□□ -0.67
TRIM13-202ENST00000378182 PRORYQ9H606 182 aa10.83□□□□□ -0.68
TRIM13-202ENST00000378182 MAP6D1Q9H9H5 199 aa10.83□□□□□ -0.68
TRIM13-202ENST00000378182 ZNF843Q8N446 348 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms