RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 A6NDX4 124 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 PRSS29PA6NIE9 313 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 HLA-DRB4P13762 266 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 C6orf226Q5I0X4 101 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 GDF5OSQ5U4N7 250 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 C20orf78Q9BR46 151 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 MLST8Q9BVC4 326 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 HLA-DRB4X5D2U9 266 aa10.12□□□□□ -0.79
NPHP4-203ENST00000378169 VWC2LB2RUY7 222 aa10.11□□□□□ -0.79
NPHP4-203ENST00000378169 C2orf70A6NJV1 201 aa10.11□□□□□ -0.79
NPHP4-203ENST00000378169 ANKRD39Q53RE8 183 aa10.11□□□□□ -0.79
NPHP4-203ENST00000378169 DEFB121Q5J5C9 76 aa10.11□□□□□ -0.79
NPHP4-203ENST00000378169 A0A096LPF7 62 aa10.11□□□□□ -0.79
NPHP4-203ENST00000378169 PAX4O43316 350 aa10.11□□□□□ -0.79
NPHP4-203ENST00000378169 HIST2H2BCQ6DN03 193 aa10.1□□□□□ -0.79
NPHP4-203ENST00000378169 ZNF48Q96MX3 618 aaPredicted RBP10.1□□□□□ -0.79
NPHP4-203ENST00000378169 CRPP02741 224 aa10.1□□□□□ -0.79
NPHP4-203ENST00000378169 Q8N1Y9 231 aa10.1□□□□□ -0.79
NPHP4-203ENST00000378169 U3KQE9 123 aa10.1□□□□□ -0.79
NPHP4-203ENST00000378169 CKS1BP61024 79 aa10.1□□□□□ -0.79
NPHP4-203ENST00000378169 C9orf47Q6ZRZ4 202 aa10.1□□□□□ -0.79
NPHP4-203ENST00000378169 MRPL52Q86TS9 123 aaKnown RBP10.1□□□□□ -0.79
NPHP4-203ENST00000378169 RASL10AQ92737 203 aa10.1□□□□□ -0.79
NPHP4-203ENST00000378169 NOP10Q9NPE3 64 aaKnown RBP10.1□□□□□ -0.79
NPHP4-203ENST00000378169 TMEM61Q8N0U2 210 aa10.09□□□□□ -0.79
NPHP4-203ENST00000378169 BVES-AS1Q5T3Y7 98 aa10.09□□□□□ -0.79
NPHP4-203ENST00000378169 C10orf99Q6UWK7 81 aa10.09□□□□□ -0.79
NPHP4-203ENST00000378169 ZNF493Q6ZR52 646 aa10.09□□□□□ -0.79
NPHP4-203ENST00000378169 JPT2Q9H910 190 aa10.09□□□□□ -0.79
NPHP4-203ENST00000378169 TMEM141Q96I45 108 aa10.09□□□□□ -0.79
NPHP4-203ENST00000378169 ANKRD17O75179 2603 aaKnown RBP10.09□□□□□ -0.79
NPHP4-203ENST00000378169 F5H768 121 aa10.09□□□□□ -0.79
NPHP4-203ENST00000378169 FSTL3O95633 263 aa10.09□□□□□ -0.79
NPHP4-203ENST00000378169 LOXL1Q08397 574 aaPredicted RBP10.09□□□□□ -0.79
NPHP4-203ENST00000378169 GPHB5Q86YW7 130 aa10.09□□□□□ -0.79
NPHP4-203ENST00000378169 A0A1W2PPR1 153 aa10.08□□□□□ -0.8
NPHP4-203ENST00000378169 K7ERJ3 54 aa10.08□□□□□ -0.8
NPHP4-203ENST00000378169 TNFRSF13BO14836 293 aaPredicted RBP10.08□□□□□ -0.8
NPHP4-203ENST00000378169 GAGE6Q13070 117 aa10.08□□□□□ -0.8
NPHP4-203ENST00000378169 ADAMTSL5Q6ZMM2 481 aa10.08□□□□□ -0.8
NPHP4-203ENST00000378169 TSSC4Q9Y5U2 329 aaPredicted RBP10.08□□□□□ -0.8
NPHP4-203ENST00000378169 IGF1P05019 195 aa10.08□□□□□ -0.8
NPHP4-203ENST00000378169 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.08□□□□□ -0.8
NPHP4-203ENST00000378169 MYMXA0A1B0GTQ4 84 aa10.08□□□□□ -0.8
NPHP4-203ENST00000378169 HIST2H2BDQ6DRA6 164 aa10.08□□□□□ -0.8
NPHP4-203ENST00000378169 COL5A1P20908 1838 aaPredicted RBP10.07□□□□□ -0.8
NPHP4-203ENST00000378169 CTRLP40313 264 aa10.07□□□□□ -0.8
NPHP4-203ENST00000378169 EBI3Q14213 229 aa10.07□□□□□ -0.8
NPHP4-203ENST00000378169 SUMO4Q6EEV6 95 aa10.07□□□□□ -0.8
NPHP4-203ENST00000378169 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.07□□□□□ -0.8
NPHP4-203ENST00000378169 A0A1B0GV72 72 aa10.07□□□□□ -0.8
NPHP4-203ENST00000378169 A0A1B0GXF2 115 aa10.07□□□□□ -0.8
NPHP4-203ENST00000378169 IGKV2-29A2NJV5 120 aaPredicted RBP10.07□□□□□ -0.8
NPHP4-203ENST00000378169 TMEM86BQ8N661 226 aa10.07□□□□□ -0.8
NPHP4-203ENST00000378169 YPEL4Q96NS1 127 aa10.07□□□□□ -0.8
NPHP4-203ENST00000378169 SPAG8Q99932 426 aaPredicted RBP10.07□□□□□ -0.8
NPHP4-203ENST00000378169 DSPP15924 2871 aaKnown RBP10.07□□□□□ -0.8
NPHP4-203ENST00000378169 COL4A2P08572 1712 aa10.07□□□□□ -0.8
NPHP4-203ENST00000378169 K7EMT4 169 aa10.06□□□□□ -0.8
NPHP4-203ENST00000378169 TTC32Q5I0X7 151 aa10.06□□□□□ -0.8
NPHP4-203ENST00000378169 WFDC11Q8NEX6 87 aa10.06□□□□□ -0.8
NPHP4-203ENST00000378169 RBMY1BA6NDE4 496 aaKnown RBP10.06□□□□□ -0.8
NPHP4-203ENST00000378169 RBMY1EA6NEQ0 496 aaKnown RBP10.06□□□□□ -0.8
NPHP4-203ENST00000378169 RBMY1DP0C7P1 496 aaKnown RBP10.06□□□□□ -0.8
NPHP4-203ENST00000378169 RBMY1A1P0DJD3 496 aaKnown RBP10.06□□□□□ -0.8
NPHP4-203ENST00000378169 RBMY1CP0DJD4 496 aa10.06□□□□□ -0.8
NPHP4-203ENST00000378169 SCGB1A1P11684 91 aa10.06□□□□□ -0.8
NPHP4-203ENST00000378169 RPL39P62891 51 aaKnown RBP10.06□□□□□ -0.8
NPHP4-203ENST00000378169 MBD6Q96DN6 1003 aa10.06□□□□□ -0.8
NPHP4-203ENST00000378169 MDFICQ9P1T7 246 aa10.06□□□□□ -0.8
NPHP4-203ENST00000378169 FREM2Q5SZK8 3169 aa10.06□□□□□ -0.8
NPHP4-203ENST00000378169 TRBV25-1A0A075B6N4 114 aa10.06□□□□□ -0.8
NPHP4-203ENST00000378169 LINC01545Q5VT33 79 aa10.06□□□□□ -0.8
NPHP4-203ENST00000378169 LURAP1LQ8IV03 231 aa10.06□□□□□ -0.8
NPHP4-203ENST00000378169 DAD1P61803 113 aa10.06□□□□□ -0.8
NPHP4-203ENST00000378169 DLX4Q92988 240 aaPredicted RBP10.06□□□□□ -0.8
NPHP4-203ENST00000378169 NDUFA12Q9UI09 145 aa10.06□□□□□ -0.8
NPHP4-203ENST00000378169 J3QQQ9 107 aa10.05□□□□□ -0.8
NPHP4-203ENST00000378169 K7EMI3 77 aa10.05□□□□□ -0.8
NPHP4-203ENST00000378169 CRIP1P50238 77 aa10.05□□□□□ -0.8
NPHP4-203ENST00000378169 PFN2P35080 140 aa10.05□□□□□ -0.8
NPHP4-203ENST00000378169 AMTNQ6UX39 209 aa10.05□□□□□ -0.8
NPHP4-203ENST00000378169 TMEM243Q9BU79 118 aa10.05□□□□□ -0.8
NPHP4-203ENST00000378169 GATD1Q8NB37 220 aa10.04□□□□□ -0.8
NPHP4-203ENST00000378169 Q6ZS46 218 aa10.04□□□□□ -0.8
NPHP4-203ENST00000378169 CITED2Q99967 270 aaPredicted RBP10.04□□□□□ -0.8
NPHP4-203ENST00000378169 CLPSL2Q6UWE3 100 aa10.04□□□□□ -0.8
NPHP4-203ENST00000378169 ZFAND3Q9H8U3 227 aa10.04□□□□□ -0.8
NPHP4-203ENST00000378169 IGHG4P01861 327 aa10.03□□□□□ -0.8
NPHP4-203ENST00000378169 ETDBQ3ZM63 59 aa10.03□□□□□ -0.8
NPHP4-203ENST00000378169 SPINK8P0C7L1 97 aa10.03□□□□□ -0.8
NPHP4-203ENST00000378169 C9orf118A6NHY6 69 aa10.03□□□□□ -0.8
NPHP4-203ENST00000378169 C9JAW5 83 aa10.03□□□□□ -0.8
NPHP4-203ENST00000378169 TSPAN13O95857 204 aa10.03□□□□□ -0.8
NPHP4-203ENST00000378169 SMAD5-AS1Q9Y6J3 95 aa10.03□□□□□ -0.8
NPHP4-203ENST00000378169 TRBV6-1A0A0K0K1D8 114 aa10.03□□□□□ -0.8
NPHP4-203ENST00000378169 MYCNOSP40205 109 aa10.03□□□□□ -0.8
NPHP4-203ENST00000378169 ZFP2Q6ZN57 461 aa10.03□□□□□ -0.8
NPHP4-203ENST00000378169 MAP1AP78559 2803 aaPredicted RBP10.02□□□□□ -0.8
NPHP4-203ENST00000378169 A0A0J9YX75 114 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms