RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 DAZ4Q86SG3 579 aaKnown RBP9.1□□□□□ -0.95
NPHP4-202ENST00000378161 DAZ1Q9NQZ3 744 aaKnown RBP9.1□□□□□ -0.95
NPHP4-202ENST00000378161 DAZ3Q9NR90 486 aaKnown RBP9.1□□□□□ -0.95
NPHP4-202ENST00000378161 C11orf86A6NJI1 115 aa9.09□□□□□ -0.95
NPHP4-202ENST00000378161 LEPROTO15243 131 aa9.09□□□□□ -0.95
NPHP4-202ENST00000378161 RNASE6Q93091 150 aaKnown RBP9.09□□□□□ -0.95
NPHP4-202ENST00000378161 LINC00311Q8N616 119 aa9.09□□□□□ -0.95
NPHP4-202ENST00000378161 DYNLRB2Q8TF09 96 aa9.09□□□□□ -0.95
NPHP4-202ENST00000378161 ATP5EP56381 51 aaPredicted RBP9.09□□□□□ -0.95
NPHP4-202ENST00000378161 NBL1P41271 181 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 C7orf69Q9H7B7 122 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 IGHV1-8P0DP01 117 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 SNRPD3P62318 126 aaKnown RBP9.08□□□□□ -0.96
NPHP4-202ENST00000378161 DAND5Q8N907 189 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 NDUFA4L2Q9NRX3 87 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 TMEM14CQ9P0S9 112 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 NDUFA12Q9UI09 145 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 PLXNB1O43157 2135 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 A0A0G2JNJ9 132 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 VCYO14598 125 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 EGR2P11161 476 aaPredicted RBP9.08□□□□□ -0.96
NPHP4-202ENST00000378161 NDPQ00604 133 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 EBI3Q14213 229 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 PIP4P2Q8N4L2 257 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 Q9UFV3 132 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 TMEM178BH3BS89 294 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 C11orf53Q8IXP5 236 aa9.08□□□□□ -0.96
NPHP4-202ENST00000378161 TECTAO75443 2155 aa9.07□□□□□ -0.96
NPHP4-202ENST00000378161 TMEM131Q92545 1883 aa9.07□□□□□ -0.96
NPHP4-202ENST00000378161 PIEZO1Q92508 2521 aa9.07□□□□□ -0.96
NPHP4-202ENST00000378161 ZNF134P52741 427 aa9.07□□□□□ -0.96
NPHP4-202ENST00000378161 SPG11Q96JI7 2443 aa9.07□□□□□ -0.96
NPHP4-202ENST00000378161 LST1O00453 97 aa9.07□□□□□ -0.96
NPHP4-202ENST00000378161 C17orf58Q2M2W7 97 aa9.07□□□□□ -0.96
NPHP4-202ENST00000378161 RNF5Q99942 180 aa9.07□□□□□ -0.96
NPHP4-202ENST00000378161 COL8A2P25067 703 aa9.07□□□□□ -0.96
NPHP4-202ENST00000378161 KHDC1LQ5JSQ8 128 aa9.07□□□□□ -0.96
NPHP4-202ENST00000378161 THAP8Q8NA92 274 aa9.07□□□□□ -0.96
NPHP4-202ENST00000378161 BUB3O43684 328 aa9.06□□□□□ -0.96
NPHP4-202ENST00000378161 CRPP02741 224 aa9.06□□□□□ -0.96
NPHP4-202ENST00000378161 DEFB104AQ8WTQ1 72 aa9.06□□□□□ -0.96
NPHP4-202ENST00000378161 CHD7Q9P2D1 2997 aa9.06□□□□□ -0.96
NPHP4-202ENST00000378161 TMEM263Q8WUH6 116 aaKnown RBP9.06□□□□□ -0.96
NPHP4-202ENST00000378161 TOMM6Q96B49 74 aa9.06□□□□□ -0.96
NPHP4-202ENST00000378161 FAM208BQ5VWN6 2430 aa9.06□□□□□ -0.96
NPHP4-202ENST00000378161 MUC22E2RYF6 1773 aaPredicted RBP9.06□□□□□ -0.96
NPHP4-202ENST00000378161 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.06□□□□□ -0.963e-7■■■■■ 29.3
NPHP4-202ENST00000378161 ADARB2-AS1A8MUL3 147 aa9.06□□□□□ -0.96
NPHP4-202ENST00000378161 IGLV1-44P01699 117 aa9.06□□□□□ -0.96
NPHP4-202ENST00000378161 GP9P14770 177 aa9.06□□□□□ -0.96
NPHP4-202ENST00000378161 PDE6HQ13956 83 aa9.06□□□□□ -0.96
NPHP4-202ENST00000378161 ADAMTS9Q9P2N4 1935 aa9.06□□□□□ -0.96
NPHP4-202ENST00000378161 IGHV3OR16-13A0A075B7E8 117 aa9.05□□□□□ -0.96
NPHP4-202ENST00000378161 IGHV3-74A0A0B4J1X5 117 aa9.05□□□□□ -0.96
NPHP4-202ENST00000378161 TRBV6-1A0A0K0K1D8 114 aa9.05□□□□□ -0.96
NPHP4-202ENST00000378161 FAM74A4Q5TZK3 123 aa9.05□□□□□ -0.96
NPHP4-202ENST00000378161 C14orf178Q8N769 122 aaPredicted RBP9.05□□□□□ -0.96
NPHP4-202ENST00000378161 A0A0C4DFX4 3053 aa9.05□□□□□ -0.96
NPHP4-202ENST00000378161 IGHV3-23P01764 117 aa9.05□□□□□ -0.96
NPHP4-202ENST00000378161 LINC01560Q8TB33 94 aa9.05□□□□□ -0.96
NPHP4-202ENST00000378161 ACACBO00763 2458 aa9.05□□□□□ -0.96
NPHP4-202ENST00000378161 IGHV1-69DA0A0B4J2H0 117 aa9.05□□□□□ -0.96
NPHP4-202ENST00000378161 IGHV1-3A0A0C4DH29 117 aa9.05□□□□□ -0.96
NPHP4-202ENST00000378161 CD28P10747 220 aa9.04□□□□□ -0.96
NPHP4-202ENST00000378161 NEXN-AS1Q8NBZ9 246 aa9.04□□□□□ -0.96
NPHP4-202ENST00000378161 MALRD1Q5VYJ5 2156 aa9.04□□□□□ -0.96
NPHP4-202ENST00000378161 HAMPP81172 84 aa9.04□□□□□ -0.96
NPHP4-202ENST00000378161 PRB3Q04118 309 aaPredicted RBP9.04□□□□□ -0.96
NPHP4-202ENST00000378161 ZNF833PQ6ZTB9 187 aa9.04□□□□□ -0.96
NPHP4-202ENST00000378161 I3L3M4 83 aa9.04□□□□□ -0.96
NPHP4-202ENST00000378161 NDUFC1O43677 76 aa9.04□□□□□ -0.96
NPHP4-202ENST00000378161 CD164Q04900 197 aa9.04□□□□□ -0.96
NPHP4-202ENST00000378161 Q6JHZ5 121 aa9.04□□□□□ -0.96
NPHP4-202ENST00000378161 FAM223AQ8IWN6 122 aa9.04□□□□□ -0.96
NPHP4-202ENST00000378161 ZNRD1Q9P1U0 126 aa9.04□□□□□ -0.96
NPHP4-202ENST00000378161 POM121L12Q8N7R1 296 aa9.03□□□□□ -0.96
NPHP4-202ENST00000378161 EML5Q05BV3 1969 aa9.03□□□□□ -0.96
NPHP4-202ENST00000378161 IGHV3OR16-8A0A075B7F1 116 aa9.03□□□□□ -0.96
NPHP4-202ENST00000378161 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.03□□□□□ -0.96
NPHP4-202ENST00000378161 LOXP28300 417 aaPredicted RBP9.03□□□□□ -0.96
NPHP4-202ENST00000378161 Q6ZS46 218 aa9.03□□□□□ -0.96
NPHP4-202ENST00000378161 TPSG1Q9NRR2 321 aa9.03□□□□□ -0.96
NPHP4-202ENST00000378161 TNCP24821 2201 aa9.03□□□□□ -0.96
NPHP4-202ENST00000378161 F6UB75 175 aa9.03□□□□□ -0.96
NPHP4-202ENST00000378161 STHQ8IWL8 128 aa9.03□□□□□ -0.96
NPHP4-202ENST00000378161 IGHV3-49A0A0A0MS15 119 aa9.02□□□□□ -0.97
NPHP4-202ENST00000378161 XCL1P47992 114 aa9.02□□□□□ -0.97
NPHP4-202ENST00000378161 BRWD1-AS2P59051 145 aa9.02□□□□□ -0.97
NPHP4-202ENST00000378161 WT1-ASQ06250 92 aa9.02□□□□□ -0.97
NPHP4-202ENST00000378161 XCL2Q9UBD3 114 aa9.02□□□□□ -0.97
NPHP4-202ENST00000378161 TIRAPP58753 221 aa9.02□□□□□ -0.97
NPHP4-202ENST00000378161 IGLV3-9A0A075B6K5 115 aa9.02□□□□□ -0.97
NPHP4-202ENST00000378161 COX6B1P14854 86 aa9.02□□□□□ -0.97
NPHP4-202ENST00000378161 LINC01561Q8N1V8 128 aa9.02□□□□□ -0.97
NPHP4-202ENST00000378161 PRUNE2Q8WUY3 3088 aa9.02□□□□□ -0.97
NPHP4-202ENST00000378161 MED13Q9UHV7 2174 aa9.02□□□□□ -0.97
NPHP4-202ENST00000378161 OTOGLQ3ZCN5 2332 aa9.02□□□□□ -0.97
NPHP4-202ENST00000378161 A0A087WVE0 104 aa9.01□□□□□ -0.97
NPHP4-202ENST00000378161 LYNX1G3V0Z9 82 aa9.01□□□□□ -0.97
NPHP4-202ENST00000378161 LYNX1P0DP58 116 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms