RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SLC25A34Q6PIV7 304 aa6.11□□□□□ -1.43
CKAP2-203ENST00000378037 DEFB125Q8N687 156 aa6.11□□□□□ -1.43
CKAP2-203ENST00000378037 C3orf56Q8N813 242 aa6.11□□□□□ -1.43
CKAP2-203ENST00000378037 TRGV4A0A0C4DH28 118 aa6.11□□□□□ -1.43
CKAP2-203ENST00000378037 RPS20P60866 119 aaKnown RBP6.11□□□□□ -1.43
CKAP2-203ENST00000378037 SRSF8Q9BRL6 282 aaKnown RBP6.11□□□□□ -1.43
CKAP2-203ENST00000378037 TYMSP04818 313 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 LYPD1Q8N2G4 141 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 SYT8Q8NBV8 401 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 RNASE8Q8TDE3 154 aaKnown RBP6.1□□□□□ -1.43
CKAP2-203ENST00000378037 DNLZQ5SXM8 178 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 ADAMTSL5Q6ZMM2 481 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 PYGO2Q9BRQ0 406 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 LOC107984156A0A0G2JMH3 177 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 SDHAF1A6NFY7 115 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 PLP1P60201 277 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 SUMO2P61956 95 aaKnown RBP6.1□□□□□ -1.43
CKAP2-203ENST00000378037 EBI3Q14213 229 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 DEFB135Q30KP9 77 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 PCP2Q8IVA1 136 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 ARL17AQ8IVW1 177 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 YPEL4Q96NS1 127 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 ZNF702PQ9H963 129 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 ST20Q9HBF5 79 aa6.1□□□□□ -1.43
CKAP2-203ENST00000378037 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.09□□□□□ -1.43
CKAP2-203ENST00000378037 IGKV2-29A2NJV5 120 aaPredicted RBP6.09□□□□□ -1.43
CKAP2-203ENST00000378037 Q6YL49 198 aa6.09□□□□□ -1.43
CKAP2-203ENST00000378037 MEGF9Q9H1U4 602 aa6.09□□□□□ -1.43
CKAP2-203ENST00000378037 UQCR10Q9UDW1 63 aa6.09□□□□□ -1.43
CKAP2-203ENST00000378037 C19orf71A6NCJ1 209 aa6.09□□□□□ -1.43
CKAP2-203ENST00000378037 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.09□□□□□ -1.43
CKAP2-203ENST00000378037 FSTL3O95633 263 aa6.09□□□□□ -1.43
CKAP2-203ENST00000378037 OR4C5Q8NGB2 326 aa6.09□□□□□ -1.43
CKAP2-203ENST00000378037 ZNRF2Q8NHG8 242 aa6.09□□□□□ -1.43
CKAP2-203ENST00000378037 LINC01006Q8NI28 216 aa6.09□□□□□ -1.43
CKAP2-203ENST00000378037 HIST1H4GQ99525 98 aa6.09□□□□□ -1.43
CKAP2-203ENST00000378037 SPXQ9BT56 116 aa6.09□□□□□ -1.43
CKAP2-203ENST00000378037 MRPL35Q9NZE8 188 aaKnown RBP6.09□□□□□ -1.43
CKAP2-203ENST00000378037 TP53TG1Q9Y2A0 90 aa6.09□□□□□ -1.43
CKAP2-203ENST00000378037 STAB2Q8WWQ8 2551 aa6.09□□□□□ -1.44
CKAP2-203ENST00000378037 PKD1L1Q8TDX9 2849 aa6.09□□□□□ -1.44
CKAP2-203ENST00000378037 PRSS29PA6NIE9 313 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 K7EP13 123 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 LINC00310P59036 64 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 FAM110AQ9BQ89 295 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 CYSLTR1Q9Y271 337 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 KLF12Q9Y4X4 402 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 LY96Q9Y6Y9 160 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 SCGB1C2P0DMR2 95 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 SNHG12Q9BXW3 62 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 NHP2Q9NX24 153 aaKnown RBP6.08□□□□□ -1.44
CKAP2-203ENST00000378037 IGHV1OR15-1A0A075B7D0 117 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 IGHG4P01861 327 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 ELANEP08246 267 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 PSMB8P28062 276 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 FAM231DQ6ZW35 169 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 CHCHD5Q9BSY4 110 aa6.08□□□□□ -1.44
CKAP2-203ENST00000378037 INS-IGF2F8WCM5 200 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 MYCNOSP40205 109 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 RPL24P83731 157 aaKnown RBP6.07□□□□□ -1.44
CKAP2-203ENST00000378037 C2orf66Q6UXQ4 117 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 ATP5L2Q7Z4Y8 100 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 DPH3P1Q9H4G8 78 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 LAMTOR2Q9Y2Q5 125 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 U3KQE9 123 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 TRAV9-2A0A087WT02 112 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 NPIPB6E9PJ23 425 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 J3QLI3 93 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 DUSP14O95147 198 aaKnown RBP6.07□□□□□ -1.44
CKAP2-203ENST00000378037 LAGE3Q14657 143 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 OXLD1Q5BKU9 147 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 SPATA12Q7Z6I5 190 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 NDUFAF3Q9BU61 184 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 Q9UF83 564 aa6.07□□□□□ -1.44
CKAP2-203ENST00000378037 UBE2L6O14933 153 aa6.06□□□□□ -1.44
CKAP2-203ENST00000378037 Q6AWC8 147 aa6.06□□□□□ -1.44
CKAP2-203ENST00000378037 K7ERJ3 54 aa6.06□□□□□ -1.44
CKAP2-203ENST00000378037 TMEM97Q5BJF2 176 aa6.06□□□□□ -1.44
CKAP2-203ENST00000378037 C1orf194Q5T5A4 169 aa6.06□□□□□ -1.44
CKAP2-203ENST00000378037 OR11H2Q8NH07 326 aa6.06□□□□□ -1.44
CKAP2-203ENST00000378037 GEMIN7Q9H840 131 aaKnown RBP6.06□□□□□ -1.44
CKAP2-203ENST00000378037 H3BUT2 72 aa6.06□□□□□ -1.44
CKAP2-203ENST00000378037 DLEU1O43261 78 aa6.06□□□□□ -1.44
CKAP2-203ENST00000378037 ZFAND2AQ8N6M9 145 aa6.06□□□□□ -1.44
CKAP2-203ENST00000378037 IGLV10-54A0A075B6I4 117 aa6.05□□□□□ -1.44
CKAP2-203ENST00000378037 AZU1P20160 251 aa6.05□□□□□ -1.44
CKAP2-203ENST00000378037 Q0VG73 95 aa6.05□□□□□ -1.44
CKAP2-203ENST00000378037 MIEN1Q9BRT3 115 aa6.05□□□□□ -1.44
CKAP2-203ENST00000378037 VCX2Q9H322 139 aa6.05□□□□□ -1.44
CKAP2-203ENST00000378037 MRPS12O15235 138 aaKnown RBP6.05□□□□□ -1.44
CKAP2-203ENST00000378037 Q6ZTI0 123 aa6.05□□□□□ -1.44
CKAP2-203ENST00000378037 TRAV2A0A0B4J234 112 aa6.05□□□□□ -1.44
CKAP2-203ENST00000378037 PSMB2P49721 201 aa6.05□□□□□ -1.44
CKAP2-203ENST00000378037 TRAV9-1A0A075B6T8 112 aa6.04□□□□□ -1.44
CKAP2-203ENST00000378037 GAGE6Q13070 117 aa6.04□□□□□ -1.44
CKAP2-203ENST00000378037 SUMO4Q6EEV6 95 aa6.04□□□□□ -1.44
CKAP2-203ENST00000378037 A0A0J9YX75 114 aa6.04□□□□□ -1.44
CKAP2-203ENST00000378037 INSP01308 110 aa6.04□□□□□ -1.44
CKAP2-203ENST00000378037 RNASE1P07998 156 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms