RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 NEXN-AS1Q8NBZ9 246 aa12.15□□□□□ -0.46
TRIM27-202ENST00000377199 FAM19A4Q96LR4 140 aa12.15□□□□□ -0.46
TRIM27-202ENST00000377199 C20orf78Q9BR46 151 aa12.15□□□□□ -0.46
TRIM27-202ENST00000377199 ZNF56Q15929 161 aa12.15□□□□□ -0.46
TRIM27-202ENST00000377199 KLHL30-AS1Q8NEE0 82 aa12.15□□□□□ -0.46
TRIM27-202ENST00000377199 HIGD1BQ9P298 99 aa12.15□□□□□ -0.46
TRIM27-202ENST00000377199 AMTNQ6UX39 209 aa12.15□□□□□ -0.47
TRIM27-202ENST00000377199 SCGB1D4Q6XE38 83 aa12.15□□□□□ -0.47
TRIM27-202ENST00000377199 PRADC1Q9BSG0 188 aa12.14□□□□□ -0.47
TRIM27-202ENST00000377199 PSMB8P28062 276 aa12.13□□□□□ -0.47
TRIM27-202ENST00000377199 DEFB136Q30KP8 78 aa12.13□□□□□ -0.47
TRIM27-202ENST00000377199 KLLNB2CW77 178 aa12.13□□□□□ -0.47
TRIM27-202ENST00000377199 ZNF815PA8K554 130 aa12.12□□□□□ -0.47
TRIM27-202ENST00000377199 SLC25A16P16260 332 aa12.12□□□□□ -0.47
TRIM27-202ENST00000377199 CFHR3Q02985 330 aa12.12□□□□□ -0.47
TRIM27-202ENST00000377199 BEX4Q9NWD9 120 aaPredicted RBP12.12□□□□□ -0.47
TRIM27-202ENST00000377199 IGHV3-73A0A0B4J1V6 119 aa12.12□□□□□ -0.47
TRIM27-202ENST00000377199 MYMXA0A1B0GTQ4 84 aa12.12□□□□□ -0.47
TRIM27-202ENST00000377199 SDHAF1A6NFY7 115 aa12.12□□□□□ -0.47
TRIM27-202ENST00000377199 PRM2P04554 102 aa12.12□□□□□ -0.47
TRIM27-202ENST00000377199 Q8N1Y9 231 aa12.12□□□□□ -0.47
TRIM27-202ENST00000377199 OPRPNQ99935 248 aaPredicted RBP12.12□□□□□ -0.47
TRIM27-202ENST00000377199 LINC00315P59091 139 aa12.11□□□□□ -0.47
TRIM27-202ENST00000377199 SNRPD3P62318 126 aaKnown RBP12.11□□□□□ -0.47
TRIM27-202ENST00000377199 ZNF479Q96JC4 524 aa12.11□□□□□ -0.47
TRIM27-202ENST00000377199 DUX3Q96PT4 197 aa12.11□□□□□ -0.47
TRIM27-202ENST00000377199 KIR2DL4Q99706 377 aa12.11□□□□□ -0.47
TRIM27-202ENST00000377199 EPG5Q9HCE0 2579 aa12.11□□□□□ -0.47
TRIM27-202ENST00000377199 TRAV12-1A0A0B4J245 112 aa12.11□□□□□ -0.47
TRIM27-202ENST00000377199 C12orf74Q32Q52 190 aa12.11□□□□□ -0.47
TRIM27-202ENST00000377199 ZFP2Q6ZN57 461 aa12.11□□□□□ -0.47
TRIM27-202ENST00000377199 WNK1Q9H4A3 2382 aa12.1□□□□□ -0.47
TRIM27-202ENST00000377199 IGHV4OR15-8A0A075B7B6 117 aa12.1□□□□□ -0.47
TRIM27-202ENST00000377199 A0A087WW49 117 aa12.1□□□□□ -0.47
TRIM27-202ENST00000377199 KHDC1LQ5JSQ8 128 aa12.1□□□□□ -0.47
TRIM27-202ENST00000377199 TMEM170BQ5T4T1 132 aa12.1□□□□□ -0.47
TRIM27-202ENST00000377199 PLEKHB2Q96CS7 222 aa12.1□□□□□ -0.47
TRIM27-202ENST00000377199 TM2D2Q9BX73 214 aa12.1□□□□□ -0.47
TRIM27-202ENST00000377199 KIF25-AS1Q9Y6Z4 181 aa12.1□□□□□ -0.47
TRIM27-202ENST00000377199 C11orf86A6NJI1 115 aa12.1□□□□□ -0.47
TRIM27-202ENST00000377199 H3BMG7 143 aa12.1□□□□□ -0.47
TRIM27-202ENST00000377199 SRSF9Q13242 221 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRIM27-202ENST00000377199 PHLDA1Q8WV24 401 aaPredicted RBP12.1□□□□□ -0.47
TRIM27-202ENST00000377199 CCDC168Q8NDH2 2452 aa12.1□□□□□ -0.47
TRIM27-202ENST00000377199 LGALS1P09382 135 aaKnown RBP12.09□□□□□ -0.47
TRIM27-202ENST00000377199 IGLL5B9A064 214 aa12.09□□□□□ -0.47
TRIM27-202ENST00000377199 TSHBP01222 138 aa12.09□□□□□ -0.47
TRIM27-202ENST00000377199 C18orf65Q6ZTR6 163 aa12.09□□□□□ -0.47
TRIM27-202ENST00000377199 APRG1Q8IVJ8 170 aa12.09□□□□□ -0.47
TRIM27-202ENST00000377199 OR5A1Q8NGJ0 315 aa12.09□□□□□ -0.47
TRIM27-202ENST00000377199 IGHV3-64A0A075B6Q5 118 aa12.09□□□□□ -0.47
TRIM27-202ENST00000377199 CRYGDP07320 174 aa12.09□□□□□ -0.47
TRIM27-202ENST00000377199 LINC01356Q8N9X3 169 aa12.08□□□□□ -0.48
TRIM27-202ENST00000377199 A0A0J9YX75 114 aa12.08□□□□□ -0.48
TRIM27-202ENST00000377199 KNCNA6PVL3 124 aa12.08□□□□□ -0.48
TRIM27-202ENST00000377199 K7EMT4 169 aa12.08□□□□□ -0.48
TRIM27-202ENST00000377199 NF1P21359 2839 aa12.08□□□□□ -0.48
TRIM27-202ENST00000377199 MED14OSP0DP75 135 aa12.07□□□□□ -0.48
TRIM27-202ENST00000377199 HOXD3P31249 432 aaPredicted RBP12.07□□□□□ -0.48
TRIM27-202ENST00000377199 ZNF876PQ49A33 203 aa12.07□□□□□ -0.48
TRIM27-202ENST00000377199 ZNF469Q96JG9 3925 aaPredicted RBP12.07□□□□□ -0.48
TRIM27-202ENST00000377199 IGHV3-16A0A0C4DH30 117 aa12.06□□□□□ -0.48
TRIM27-202ENST00000377199 PPP1R17O96001 155 aa12.06□□□□□ -0.48
TRIM27-202ENST00000377199 TEX48A0A1B0GUV7 120 aa12.06□□□□□ -0.48
TRIM27-202ENST00000377199 VCYO14598 125 aa12.06□□□□□ -0.48
TRIM27-202ENST00000377199 APOMO95445 188 aa12.06□□□□□ -0.48
TRIM27-202ENST00000377199 HOXA3O43365 443 aaPredicted RBP12.06□□□□□ -0.48
TRIM27-202ENST00000377199 BRI3O95415 125 aa12.06□□□□□ -0.48
TRIM27-202ENST00000377199 SLURP1P55000 103 aa12.06□□□□□ -0.48
TRIM27-202ENST00000377199 WFDC2Q14508 124 aa12.06□□□□□ -0.48
TRIM27-202ENST00000377199 CHD6Q8TD26 2715 aa12.06□□□□□ -0.48
TRIM27-202ENST00000377199 TRBV7-3A0A075B6L6 115 aa12.05□□□□□ -0.48
TRIM27-202ENST00000377199 E9PLD3 99 aa12.05□□□□□ -0.48
TRIM27-202ENST00000377199 POLR2KP53803 58 aaKnown RBP12.05□□□□□ -0.48
TRIM27-202ENST00000377199 USP24Q9UPU5 2620 aa12.05□□□□□ -0.48
TRIM27-202ENST00000377199 NACAE9PAV3 2078 aa12.05□□□□□ -0.48
TRIM27-202ENST00000377199 IGLV4-69A0A075B6H9 119 aa12.04□□□□□ -0.48
TRIM27-202ENST00000377199 IGHV1OR15-1A0A075B7D0 117 aa12.04□□□□□ -0.48
TRIM27-202ENST00000377199 K7EQG2 157 aa12.04□□□□□ -0.48
TRIM27-202ENST00000377199 P0DMU3 169 aa12.04□□□□□ -0.48
TRIM27-202ENST00000377199 FAM231AP0DMU4 169 aa12.04□□□□□ -0.48
TRIM27-202ENST00000377199 FAM231CP0DMU5 169 aa12.04□□□□□ -0.48
TRIM27-202ENST00000377199 PGPEP1Q9NXJ5 209 aa12.04□□□□□ -0.48
TRIM27-202ENST00000377199 NXPH4O95158 308 aa12.04□□□□□ -0.48
TRIM27-202ENST00000377199 PMVKQ15126 192 aa12.04□□□□□ -0.48
TRIM27-202ENST00000377199 TCTEX1D4Q5JR98 221 aa12.04□□□□□ -0.48
TRIM27-202ENST00000377199 MRPL16Q9NX20 251 aaKnown RBP12.04□□□□□ -0.48
TRIM27-202ENST00000377199 TRBV7-9A0A0J9YWB2 115 aa12.03□□□□□ -0.48
TRIM27-202ENST00000377199 IGIPA6NJ69 53 aa12.03□□□□□ -0.48
TRIM27-202ENST00000377199 PROK1P58294 105 aa12.03□□□□□ -0.48
TRIM27-202ENST00000377199 SH2D6Q7Z4S9 175 aa12.03□□□□□ -0.48
TRIM27-202ENST00000377199 SYT8Q8NBV8 401 aa12.03□□□□□ -0.48
TRIM27-202ENST00000377199 DEFB131AP59861 70 aa12.03□□□□□ -0.48
TRIM27-202ENST00000377199 LOC107984156A0A0G2JMH3 177 aa12.03□□□□□ -0.48
TRIM27-202ENST00000377199 G3V4G9 280 aa12.03□□□□□ -0.48
TRIM27-202ENST00000377199 KRTAP10-9P60411 292 aa12.03□□□□□ -0.48
TRIM27-202ENST00000377199 MORN3Q6PF18 240 aaPredicted RBP12.03□□□□□ -0.48
TRIM27-202ENST00000377199 ARL17AQ8IVW1 177 aa12.03□□□□□ -0.48
TRIM27-202ENST00000377199 ZNRF2Q8NHG8 242 aa12.03□□□□□ -0.48
TRIM27-202ENST00000377199 TSPEAR-AS2P59090 65 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 280.9 ms