RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 J3QLI3 93 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 K7EQG2 157 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 RBMY1A1P0DJD3 496 aaKnown RBP7.11□□□□□ -1.27
TRIM39-202ENST00000376659 RBMY1CP0DJD4 496 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 IGHV4-31P0DP07 118 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 RBMY1FQ15415 496 aaKnown RBP7.11□□□□□ -1.27
TRIM39-202ENST00000376659 MAPKAPK5-AS1Q8N8E1 139 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 LINC01356Q8N9X3 169 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 FAM104AQ969W3 186 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 TTTY13Q9BZ97 58 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 A0A0G2JLM5 398 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 LINC01619G3V211 115 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 SPINK8P0C7L1 97 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 COX6B1P14854 86 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 VCX2Q9H322 139 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 IGLV4-69A0A075B6H9 119 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 A0A0J9YX75 114 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 C9orf118A6NHY6 69 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 IGKCP01834 107 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 POLR2KP53803 58 aaKnown RBP7.11□□□□□ -1.27
TRIM39-202ENST00000376659 OR5A1Q8NGJ0 315 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 OR10J6PQ8NGY7 276 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 ZNF418Q8TF45 676 aaPredicted RBP7.11□□□□□ -1.27
TRIM39-202ENST00000376659 DPH3P1Q9H4G8 78 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 EDA2RQ9HAV5 297 aa7.11□□□□□ -1.27
TRIM39-202ENST00000376659 MRPL35Q9NZE8 188 aaKnown RBP7.11□□□□□ -1.27
TRIM39-202ENST00000376659 TEX15Q9BXT5 2789 aa7.1□□□□□ -1.27
TRIM39-202ENST00000376659 IGHV3-16A0A0C4DH30 117 aa7.1□□□□□ -1.27
TRIM39-202ENST00000376659 H3BRM9 83 aa7.1□□□□□ -1.27
TRIM39-202ENST00000376659 ATP5LO75964 103 aa7.1□□□□□ -1.27
TRIM39-202ENST00000376659 ANKRD17O75179 2603 aaKnown RBP7.1□□□□□ -1.27
TRIM39-202ENST00000376659 SUMO2P61956 95 aaKnown RBP7.1□□□□□ -1.27
TRIM39-202ENST00000376659 ZNF256Q9Y2P7 627 aaPredicted RBP7.1□□□□□ -1.27
TRIM39-202ENST00000376659 IGIPA6NJ69 53 aa7.1□□□□□ -1.27
TRIM39-202ENST00000376659 KRTAP10-9P60411 292 aa7.1□□□□□ -1.27
TRIM39-202ENST00000376659 BAALCQ8WXS3 180 aa7.1□□□□□ -1.27
TRIM39-202ENST00000376659 TM2D2Q9BX73 214 aa7.1□□□□□ -1.27
TRIM39-202ENST00000376659 RNASE4P34096 147 aaKnown RBP7.09□□□□□ -1.27
TRIM39-202ENST00000376659 ASIPP42127 132 aa7.09□□□□□ -1.27
TRIM39-202ENST00000376659 ERG28Q9UKR5 140 aa7.09□□□□□ -1.27
TRIM39-202ENST00000376659 TRBV6-5A0A0K0K1A5 114 aa7.09□□□□□ -1.27
TRIM39-202ENST00000376659 PSMG4Q5JS54 123 aa7.09□□□□□ -1.27
TRIM39-202ENST00000376659 SPATA25Q9BR10 227 aa7.09□□□□□ -1.27
TRIM39-202ENST00000376659 TRBV7-3A0A075B6L6 115 aa7.09□□□□□ -1.28
TRIM39-202ENST00000376659 A0A1B0GWB2 263 aa7.09□□□□□ -1.28
TRIM39-202ENST00000376659 DPM2O94777 84 aa7.09□□□□□ -1.28
TRIM39-202ENST00000376659 FABP2P12104 132 aa7.09□□□□□ -1.28
TRIM39-202ENST00000376659 SPANXN1Q5VSR9 72 aa7.09□□□□□ -1.28
TRIM39-202ENST00000376659 FOXC2Q99958 501 aa7.09□□□□□ -1.28
TRIM39-202ENST00000376659 JPT2Q9H910 190 aa7.09□□□□□ -1.28
TRIM39-202ENST00000376659 VPREB3Q9UKI3 123 aa7.09□□□□□ -1.28
TRIM39-202ENST00000376659 TRBV25-1A0A075B6N4 114 aa7.08□□□□□ -1.28
TRIM39-202ENST00000376659 A6NDN8 102 aa7.08□□□□□ -1.28
TRIM39-202ENST00000376659 LGALS1P09382 135 aaKnown RBP7.08□□□□□ -1.28
TRIM39-202ENST00000376659 FXYD2P54710 66 aa7.08□□□□□ -1.28
TRIM39-202ENST00000376659 C14orf178Q8N769 122 aaPredicted RBP7.08□□□□□ -1.28
TRIM39-202ENST00000376659 AMELXQ99217 191 aa7.08□□□□□ -1.28
TRIM39-202ENST00000376659 SUMO4Q6EEV6 95 aa7.08□□□□□ -1.28
TRIM39-202ENST00000376659 C1QTNF4Q9BXJ3 329 aa7.08□□□□□ -1.28
TRIM39-202ENST00000376659 NIPBLQ6KC79 2804 aaeCLIP7.08□□□□□ -1.28
TRIM39-202ENST00000376659 A1L4Q6 167 aa7.07□□□□□ -1.28
TRIM39-202ENST00000376659 RBMY1BA6NDE4 496 aaKnown RBP7.07□□□□□ -1.28
TRIM39-202ENST00000376659 RBMY1EA6NEQ0 496 aaKnown RBP7.07□□□□□ -1.28
TRIM39-202ENST00000376659 PRB1P04280 392 aa7.07□□□□□ -1.28
TRIM39-202ENST00000376659 RBMY1DP0C7P1 496 aaKnown RBP7.07□□□□□ -1.28
TRIM39-202ENST00000376659 SRD5A1P18405 259 aa7.07□□□□□ -1.28
TRIM39-202ENST00000376659 ETDBQ3ZM63 59 aa7.07□□□□□ -1.28
TRIM39-202ENST00000376659 C18orf65Q6ZTR6 163 aa7.07□□□□□ -1.28
TRIM39-202ENST00000376659 ZNF843Q8N446 348 aa7.07□□□□□ -1.28
TRIM39-202ENST00000376659 SPAG8Q99932 426 aaPredicted RBP7.07□□□□□ -1.28
TRIM39-202ENST00000376659 TRBV27A0A0K0K1C4 114 aa7.07□□□□□ -1.28
TRIM39-202ENST00000376659 PLNP26678 52 aa7.07□□□□□ -1.28
TRIM39-202ENST00000376659 CHAC1Q9BUX1 264 aa7.07□□□□□ -1.28
TRIM39-202ENST00000376659 F8VRH5 84 aa7.06□□□□□ -1.28
TRIM39-202ENST00000376659 TCTAP57738 103 aa7.06□□□□□ -1.28
TRIM39-202ENST00000376659 ZC2HC1BQ5TFG8 222 aa7.06□□□□□ -1.28
TRIM39-202ENST00000376659 SH2D6Q7Z4S9 175 aa7.06□□□□□ -1.28
TRIM39-202ENST00000376659 GTSCR1Q86UQ5 136 aa7.06□□□□□ -1.28
TRIM39-202ENST00000376659 CYSLTR1Q9Y271 337 aa7.06□□□□□ -1.28
TRIM39-202ENST00000376659 PRSS29PA6NIE9 313 aa7.06□□□□□ -1.28
TRIM39-202ENST00000376659 ORMDL2Q53FV1 153 aa7.06□□□□□ -1.28
TRIM39-202ENST00000376659 UBE2E2Q96LR5 201 aa7.06□□□□□ -1.28
TRIM39-202ENST00000376659 PPDPFQ9H3Y8 114 aa7.06□□□□□ -1.28
TRIM39-202ENST00000376659 KMT2BQ9UMN6 2715 aaPredicted RBP7.06□□□□□ -1.28
TRIM39-202ENST00000376659 A0A1W2PPM0 123 aa7.06□□□□□ -1.28
TRIM39-202ENST00000376659 WFDC2Q14508 124 aa7.06□□□□□ -1.28
TRIM39-202ENST00000376659 M0QY20 66 aa7.05□□□□□ -1.28
TRIM39-202ENST00000376659 RAX2Q96IS3 184 aa7.05□□□□□ -1.28
TRIM39-202ENST00000376659 MDFICQ9P1T7 246 aa7.05□□□□□ -1.28
TRIM39-202ENST00000376659 C5orf47Q569G3 176 aa7.05□□□□□ -1.28
TRIM39-202ENST00000376659 LRRC75A-AS1Q8N1F1 130 aa7.05□□□□□ -1.28
TRIM39-202ENST00000376659 AGRNO00468 2067 aa7.05□□□□□ -1.28
TRIM39-202ENST00000376659 H7C1H1 209 aa7.05□□□□□ -1.28
TRIM39-202ENST00000376659 TGFAP01135 160 aa7.05□□□□□ -1.28
TRIM39-202ENST00000376659 ELANEP08246 267 aa7.05□□□□□ -1.28
TRIM39-202ENST00000376659 NMUP48645 174 aa7.05□□□□□ -1.28
TRIM39-202ENST00000376659 CEND1Q8N111 149 aa7.05□□□□□ -1.28
TRIM39-202ENST00000376659 DOPEY2Q9Y3R5 2298 aa7.04□□□□□ -1.28
TRIM39-202ENST00000376659 MT-ATP8P03928 68 aa7.04□□□□□ -1.28
TRIM39-202ENST00000376659 NSUN5P1Q3KNT7 163 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms