RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 IGKV1-6A0A0C4DH72 117 aa9.84□□□□□ -0.83
VPS13A-204ENST00000376634 IGKV3D-7A0A0C4DH55 119 aa9.84□□□□□ -0.83
VPS13A-204ENST00000376634 WT1-ASQ06250 92 aa9.84□□□□□ -0.83
VPS13A-204ENST00000376634 MRPL23Q16540 153 aaKnown RBP9.84□□□□□ -0.83
VPS13A-204ENST00000376634 CCL25O15444 150 aa9.84□□□□□ -0.83
VPS13A-204ENST00000376634 HIST2H2BCQ6DN03 193 aa9.84□□□□□ -0.83
VPS13A-204ENST00000376634 DEFB136Q30KP8 78 aa9.83□□□□□ -0.84
VPS13A-204ENST00000376634 KLF2Q9Y5W3 355 aaPredicted RBP9.83□□□□□ -0.84
VPS13A-204ENST00000376634 RNF144BQ7Z419 303 aa9.83□□□□□ -0.84
VPS13A-204ENST00000376634 DKK2Q9UBU2 259 aa9.83□□□□□ -0.84
VPS13A-204ENST00000376634 LTBP2Q14767 1821 aa9.83□□□□□ -0.84
VPS13A-204ENST00000376634 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.83□□□□□ -0.84
VPS13A-204ENST00000376634 ETV2O00321 342 aaPredicted RBP9.83□□□□□ -0.84
VPS13A-204ENST00000376634 TPSG1Q9NRR2 321 aa9.83□□□□□ -0.84
VPS13A-204ENST00000376634 FOXE3Q13461 319 aa9.82□□□□□ -0.84
VPS13A-204ENST00000376634 C11orf52Q96A22 123 aa9.82□□□□□ -0.84
VPS13A-204ENST00000376634 H0YGX0 51 aa9.82□□□□□ -0.84
VPS13A-204ENST00000376634 LINC01620Q4KN68 170 aa9.82□□□□□ -0.84
VPS13A-204ENST00000376634 SND1-IT1Q9HBX3 110 aa9.82□□□□□ -0.84
VPS13A-204ENST00000376634 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
VPS13A-204ENST00000376634 SPART-AS1P0CW21 52 aa9.82□□□□□ -0.84
VPS13A-204ENST00000376634 FOXL2NBQ6ZUU3 175 aa9.81□□□□□ -0.84
VPS13A-204ENST00000376634 C17orf82Q86X59 251 aaPredicted RBP9.81□□□□□ -0.84
VPS13A-204ENST00000376634 IGLV2-23P01705 113 aa9.81□□□□□ -0.84
VPS13A-204ENST00000376634 GNRH2O43555 120 aa9.81□□□□□ -0.84
VPS13A-204ENST00000376634 LENEPQ9Y5L5 61 aa9.81□□□□□ -0.84
VPS13A-204ENST00000376634 IGLC7A0M8Q6 106 aa9.81□□□□□ -0.84
VPS13A-204ENST00000376634 J3QKU1 62 aa9.81□□□□□ -0.84
VPS13A-204ENST00000376634 TM2D2Q9BX73 214 aa9.81□□□□□ -0.84
VPS13A-204ENST00000376634 TAX1BP3O14907 124 aa9.81□□□□□ -0.84
VPS13A-204ENST00000376634 LOXP28300 417 aaPredicted RBP9.81□□□□□ -0.84
VPS13A-204ENST00000376634 HIGD2BQ4VC39 106 aa9.81□□□□□ -0.84
VPS13A-204ENST00000376634 DEFB125Q8N687 156 aa9.81□□□□□ -0.84
VPS13A-204ENST00000376634 WIPF3A6NGB9 483 aa9.81□□□□□ -0.84
VPS13A-204ENST00000376634 IGFL3Q6UXB1 125 aa9.81□□□□□ -0.84
VPS13A-204ENST00000376634 IGLV3-9A0A075B6K5 115 aa9.8□□□□□ -0.84
VPS13A-204ENST00000376634 K7EM74 188 aa9.8□□□□□ -0.84
VPS13A-204ENST00000376634 Q6ZVH6 145 aa9.8□□□□□ -0.84
VPS13A-204ENST00000376634 C5orf38Q86SI9 138 aa9.8□□□□□ -0.84
VPS13A-204ENST00000376634 WIPF2Q8TF74 440 aaPredicted RBP9.8□□□□□ -0.84
VPS13A-204ENST00000376634 F8W735 103 aaPredicted RBP9.8□□□□□ -0.84
VPS13A-204ENST00000376634 IGHV2-5P01817 119 aa9.8□□□□□ -0.84
VPS13A-204ENST00000376634 IGLC1P0CG04 106 aa9.8□□□□□ -0.84
VPS13A-204ENST00000376634 K7ERS5 55 aa9.8□□□□□ -0.84
VPS13A-204ENST00000376634 NDUFA1O15239 70 aa9.8□□□□□ -0.84
VPS13A-204ENST00000376634 WDR86Q86TI4 376 aa9.8□□□□□ -0.84
VPS13A-204ENST00000376634 ASPHD1Q5U4P2 390 aa9.8□□□□□ -0.84
VPS13A-204ENST00000376634 MTORP42345 2549 aa9.8□□□□□ -0.84
VPS13A-204ENST00000376634 IGKV4-1P06312 121 aa9.8□□□□□ -0.84
VPS13A-204ENST00000376634 TEN1Q86WV5 123 aa9.8□□□□□ -0.84
VPS13A-204ENST00000376634 TRBV7-3A0A075B6L6 115 aa9.79□□□□□ -0.84
VPS13A-204ENST00000376634 TMEM61Q8N0U2 210 aa9.79□□□□□ -0.84
VPS13A-204ENST00000376634 C9JQL5 133 aa9.79□□□□□ -0.84
VPS13A-204ENST00000376634 GP9P14770 177 aa9.79□□□□□ -0.84
VPS13A-204ENST00000376634 MRPL55Q7Z7F7 128 aaKnown RBP9.79□□□□□ -0.84
VPS13A-204ENST00000376634 C15orf65H3BRN8 121 aa9.79□□□□□ -0.84
VPS13A-204ENST00000376634 RPL39LQ96EH5 51 aaKnown RBP9.79□□□□□ -0.84
VPS13A-204ENST00000376634 PCP2Q8IVA1 136 aa9.79□□□□□ -0.84
VPS13A-204ENST00000376634 H0Y9J4 135 aa9.78□□□□□ -0.84
VPS13A-204ENST00000376634 FAM120AOSQ5T036 256 aa9.78□□□□□ -0.84
VPS13A-204ENST00000376634 ATP6V0E2Q8NHE4 81 aa9.78□□□□□ -0.84
VPS13A-204ENST00000376634 COL4A4P53420 1690 aaPredicted RBP9.78□□□□□ -0.84
VPS13A-204ENST00000376634 CRYGBP07316 175 aa9.78□□□□□ -0.84
VPS13A-204ENST00000376634 C10orf91Q5T1B1 145 aa9.78□□□□□ -0.84
VPS13A-204ENST00000376634 IGHV3-30P01768 117 aa9.78□□□□□ -0.84
VPS13A-204ENST00000376634 IGHV3-33P01772 117 aa9.78□□□□□ -0.84
VPS13A-204ENST00000376634 IGHV3-30-3P0DP02 117 aa9.78□□□□□ -0.84
VPS13A-204ENST00000376634 IGHV3-30-5P0DP03 117 aa9.78□□□□□ -0.84
VPS13A-204ENST00000376634 SLURP1P55000 103 aa9.78□□□□□ -0.84
VPS13A-204ENST00000376634 IL15RAQ13261 267 aa9.78□□□□□ -0.84
VPS13A-204ENST00000376634 RNF183Q96D59 192 aa9.78□□□□□ -0.84
VPS13A-204ENST00000376634 FLG2Q5D862 2391 aaPredicted RBP9.77□□□□□ -0.85
VPS13A-204ENST00000376634 TRBV12-3P01733 135 aa9.77□□□□□ -0.85
VPS13A-204ENST00000376634 IGHV4-59P01825 116 aa9.77□□□□□ -0.85
VPS13A-204ENST00000376634 DUX4L9Q6RFH8 374 aaPredicted RBP9.76□□□□□ -0.85
VPS13A-204ENST00000376634 USP24Q9UPU5 2620 aa9.76□□□□□ -0.85
VPS13A-204ENST00000376634 PIFOQ8TCI5 191 aa9.76□□□□□ -0.85
VPS13A-204ENST00000376634 LGALS9O00182 355 aa9.76□□□□□ -0.85
VPS13A-204ENST00000376634 APRG1Q8IVJ8 170 aa9.76□□□□□ -0.85
VPS13A-204ENST00000376634 ATP5G1P05496 136 aa9.76□□□□□ -0.85
VPS13A-204ENST00000376634 NCR3O14931 201 aa9.76□□□□□ -0.85
VPS13A-204ENST00000376634 B9D2Q9BPU9 175 aa9.76□□□□□ -0.85
VPS13A-204ENST00000376634 K7EN84 100 aa9.76□□□□□ -0.85
VPS13A-204ENST00000376634 CXCL5P42830 114 aa9.76□□□□□ -0.85
VPS13A-204ENST00000376634 TMEM256-PLSCR3K7ERE1 68 aa9.75□□□□□ -0.85
VPS13A-204ENST00000376634 ZNF726P1Q15940 193 aa9.75□□□□□ -0.85
VPS13A-204ENST00000376634 KLK5Q9Y337 293 aaPredicted RBP9.75□□□□□ -0.85
VPS13A-204ENST00000376634 HHLA3Q9XRX5 114 aa9.75□□□□□ -0.85
VPS13A-204ENST00000376634 CASC2Q6XLA1 102 aa9.75□□□□□ -0.85
VPS13A-204ENST00000376634 JMJD7-PLA2G4BH0Y9G9 81 aa9.75□□□□□ -0.85
VPS13A-204ENST00000376634 Q6ZR03 302 aa9.75□□□□□ -0.85
VPS13A-204ENST00000376634 KAAG1Q9UBP8 84 aa9.74□□□□□ -0.85
VPS13A-204ENST00000376634 PRR15LQ9BU68 103 aa9.74□□□□□ -0.85
VPS13A-204ENST00000376634 PDE6GP18545 87 aa9.73□□□□□ -0.85
VPS13A-204ENST00000376634 FANCD2OSQ96PS1 177 aa9.73□□□□□ -0.85
VPS13A-204ENST00000376634 IGHV4OR15-8A0A075B7B6 117 aa9.73□□□□□ -0.85
VPS13A-204ENST00000376634 A0A087WW49 117 aa9.73□□□□□ -0.85
VPS13A-204ENST00000376634 C14orf177Q52M58 125 aa9.73□□□□□ -0.85
VPS13A-204ENST00000376634 DAND5Q8N907 189 aa9.73□□□□□ -0.85
VPS13A-204ENST00000376634 IGLV1-44P01699 117 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 394.2 ms