RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 TRGC2P03986 189 aa12.29□□□□□ -0.44
HLA-DMA-201ENST00000374843 CRYGDP07320 174 aa12.29□□□□□ -0.44
HLA-DMA-201ENST00000374843 UFSP1Q6NVU6 142 aa12.29□□□□□ -0.44
HLA-DMA-201ENST00000374843 C14orf178Q8N769 122 aaPredicted RBP12.29□□□□□ -0.44
HLA-DMA-201ENST00000374843 FRZBQ92765 325 aa12.29□□□□□ -0.44
HLA-DMA-201ENST00000374843 JPT2Q9H910 190 aa12.29□□□□□ -0.44
HLA-DMA-201ENST00000374843 RHODO00212 210 aa12.28□□□□□ -0.44
HLA-DMA-201ENST00000374843 RAB4AP20338 218 aa12.28□□□□□ -0.44
HLA-DMA-201ENST00000374843 FABP9Q0Z7S8 132 aa12.28□□□□□ -0.44
HLA-DMA-201ENST00000374843 CFAP126Q5VTH2 177 aa12.28□□□□□ -0.44
HLA-DMA-201ENST00000374843 DKK2Q9UBU2 259 aa12.28□□□□□ -0.44
HLA-DMA-201ENST00000374843 TRAV4A0A0B4J268 109 aa12.27□□□□□ -0.45
HLA-DMA-201ENST00000374843 TEX48A0A1B0GUV7 120 aa12.27□□□□□ -0.45
HLA-DMA-201ENST00000374843 SMIM17P0DL12 118 aa12.27□□□□□ -0.45
HLA-DMA-201ENST00000374843 EMP1P54849 157 aa12.27□□□□□ -0.45
HLA-DMA-201ENST00000374843 MRPL51Q4U2R6 128 aaKnown RBP12.27□□□□□ -0.45
HLA-DMA-201ENST00000374843 ZFP2Q6ZN57 461 aa12.27□□□□□ -0.45
HLA-DMA-201ENST00000374843 SAMD10Q9BYL1 202 aa12.27□□□□□ -0.45
HLA-DMA-201ENST00000374843 U3KQK5 164 aa12.27□□□□□ -0.45
HLA-DMA-201ENST00000374843 A0A087WWL8 130 aa12.26□□□□□ -0.45
HLA-DMA-201ENST00000374843 FAM222AQ5U5X8 452 aa12.26□□□□□ -0.45
HLA-DMA-201ENST00000374843 MRAP2Q96G30 205 aa12.26□□□□□ -0.45
HLA-DMA-201ENST00000374843 EDA2RQ9HAV5 297 aa12.26□□□□□ -0.45
HLA-DMA-201ENST00000374843 GAGE12BA1L429 117 aa12.25□□□□□ -0.45
HLA-DMA-201ENST00000374843 CIDEAO60543 219 aa12.25□□□□□ -0.45
HLA-DMA-201ENST00000374843 GAGE7O76087 117 aa12.25□□□□□ -0.45
HLA-DMA-201ENST00000374843 PPBPP02775 128 aa12.25□□□□□ -0.45
HLA-DMA-201ENST00000374843 GAGE12FP0CL80 117 aa12.25□□□□□ -0.45
HLA-DMA-201ENST00000374843 GAGE12GP0CL81 117 aa12.25□□□□□ -0.45
HLA-DMA-201ENST00000374843 GAGE12IP0CL82 117 aa12.25□□□□□ -0.45
HLA-DMA-201ENST00000374843 TENM3Q9P273 2699 aa12.25□□□□□ -0.45
HLA-DMA-201ENST00000374843 C1orf196B1AJZ1 125 aa12.24□□□□□ -0.45
HLA-DMA-201ENST00000374843 DEFB4AO15263 64 aa12.24□□□□□ -0.45
HLA-DMA-201ENST00000374843 FAM74A4Q5TZK3 123 aa12.24□□□□□ -0.45
HLA-DMA-201ENST00000374843 CELA1Q9UNI1 258 aa12.24□□□□□ -0.45
HLA-DMA-201ENST00000374843 PRKDCP78527 4128 aaKnown RBP12.24□□□□□ -0.45
HLA-DMA-201ENST00000374843 MGPP08493 103 aa12.23□□□□□ -0.45
HLA-DMA-201ENST00000374843 SPART-AS1P0CW21 52 aa12.23□□□□□ -0.45
HLA-DMA-201ENST00000374843 DEFA6Q01524 100 aa12.23□□□□□ -0.45
HLA-DMA-201ENST00000374843 ORMDL3Q8N138 153 aa12.23□□□□□ -0.45
HLA-DMA-201ENST00000374843 OR4C5Q8NGB2 326 aa12.23□□□□□ -0.45
HLA-DMA-201ENST00000374843 ALKBH7Q9BT30 221 aaPredicted RBP12.23□□□□□ -0.45
HLA-DMA-201ENST00000374843 ZMAT4Q9H898 229 aa12.23□□□□□ -0.45
HLA-DMA-201ENST00000374843 NACAE9PAV3 2078 aa12.22□□□□□ -0.45
HLA-DMA-201ENST00000374843 TRGV2A0A075B6R0 118 aa12.22□□□□□ -0.45
HLA-DMA-201ENST00000374843 D6R8Y8 96 aa12.22□□□□□ -0.45
HLA-DMA-201ENST00000374843 KIAA1644Q3SXP7 199 aa12.22□□□□□ -0.45
HLA-DMA-201ENST00000374843 SUMO4Q6EEV6 95 aa12.22□□□□□ -0.45
HLA-DMA-201ENST00000374843 LAMTOR2Q9Y2Q5 125 aa12.22□□□□□ -0.45
HLA-DMA-201ENST00000374843 HIST1H2BKO60814 126 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 HIST1H2BJP06899 126 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 HIST1H2BOP23527 126 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 SRIP30626 198 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 HIST1H2BBP33778 126 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 HIST1H2BDP58876 126 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 RAB5BP61020 215 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 HIST1H2BCP62807 126 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 ZNF56Q15929 161 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 HIST2H2BEQ16778 126 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 NRACQ8N912 160 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 HIST1H2BHQ93079 126 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 ZNF479Q96JC4 524 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 HIST1H2BNQ99877 126 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 HIST1H2BMQ99879 126 aa12.21□□□□□ -0.45
HLA-DMA-201ENST00000374843 TRAV26-2A0A0B4J265 109 aa12.2□□□□□ -0.46
HLA-DMA-201ENST00000374843 M0QY20 66 aa12.2□□□□□ -0.46
HLA-DMA-201ENST00000374843 NCR2O95944 276 aa12.2□□□□□ -0.46
HLA-DMA-201ENST00000374843 IGHV3-53P01767 116 aa12.2□□□□□ -0.46
HLA-DMA-201ENST00000374843 DEFB130BP0DP73 79 aa12.2□□□□□ -0.46
HLA-DMA-201ENST00000374843 DEFB130AP0DP74 79 aa12.2□□□□□ -0.46
HLA-DMA-201ENST00000374843 CKS2P33552 79 aa12.2□□□□□ -0.46
HLA-DMA-201ENST00000374843 A0A0J9YWU9 116 aa12.19□□□□□ -0.46
HLA-DMA-201ENST00000374843 SMKR1H3BMG3 65 aa12.19□□□□□ -0.46
HLA-DMA-201ENST00000374843 GAS8-AS1O95177 125 aa12.19□□□□□ -0.46
HLA-DMA-201ENST00000374843 NHLRC4P0CG21 123 aaPredicted RBP12.19□□□□□ -0.46
HLA-DMA-201ENST00000374843 DAD1P61803 113 aa12.19□□□□□ -0.46
HLA-DMA-201ENST00000374843 PRELID3AQ96N28 172 aa12.19□□□□□ -0.46
HLA-DMA-201ENST00000374843 IGHV3-73A0A0B4J1V6 119 aa12.18□□□□□ -0.46
HLA-DMA-201ENST00000374843 F5H697 171 aa12.18□□□□□ -0.46
HLA-DMA-201ENST00000374843 H7C1H1 209 aa12.18□□□□□ -0.46
HLA-DMA-201ENST00000374843 PPP1R17O96001 155 aa12.18□□□□□ -0.46
HLA-DMA-201ENST00000374843 NPYP01303 97 aa12.18□□□□□ -0.46
HLA-DMA-201ENST00000374843 GATA1P15976 413 aaPredicted RBP12.18□□□□□ -0.46
HLA-DMA-201ENST00000374843 Q6ZSN1 163 aa12.18□□□□□ -0.46
HLA-DMA-201ENST00000374843 Q0VG73 95 aa12.17□□□□□ -0.46
HLA-DMA-201ENST00000374843 FHL2Q14192 279 aa12.17□□□□□ -0.46
HLA-DMA-201ENST00000374843 C12orf74Q32Q52 190 aa12.17□□□□□ -0.46
HLA-DMA-201ENST00000374843 OR10J3Q5JRS4 329 aa12.17□□□□□ -0.46
HLA-DMA-201ENST00000374843 C18orf32Q8TCD1 76 aa12.17□□□□□ -0.46
HLA-DMA-201ENST00000374843 TRBV6-5A0A0K0K1A5 114 aa12.16□□□□□ -0.46
HLA-DMA-201ENST00000374843 TNFRSF6BO95407 300 aa12.16□□□□□ -0.46
HLA-DMA-201ENST00000374843 COL7A1Q02388 2944 aa12.16□□□□□ -0.46
HLA-DMA-201ENST00000374843 TRBV10-1A0A0K0K1A3 114 aa12.15□□□□□ -0.46
HLA-DMA-201ENST00000374843 TRBV6-4A0A1B0GX49 114 aa12.15□□□□□ -0.46
HLA-DMA-201ENST00000374843 PRSS47A8MTI9 375 aa12.15□□□□□ -0.46
HLA-DMA-201ENST00000374843 K7EQD1 137 aa12.15□□□□□ -0.46
HLA-DMA-201ENST00000374843 ATP5G1P05496 136 aa12.15□□□□□ -0.46
HLA-DMA-201ENST00000374843 RPL32P62910 135 aaKnown RBP12.15□□□□□ -0.46
HLA-DMA-201ENST00000374843 COA6Q5JTJ3 125 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms