RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 RIPPLY3P57055 190 aa6.46□□□□□ -1.38
SNRNP40-202ENST00000373720 LINC00315P59091 139 aa6.46□□□□□ -1.38
SNRNP40-202ENST00000373720 TMEM97Q5BJF2 176 aa6.46□□□□□ -1.38
SNRNP40-202ENST00000373720 SCGB3A1Q96QR1 104 aa6.46□□□□□ -1.38
SNRNP40-202ENST00000373720 YAE1D1Q9NRH1 226 aa6.46□□□□□ -1.38
SNRNP40-202ENST00000373720 USP9YO00507 2555 aaPredicted RBP6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 BAHCC1Q9P281 2608 aa6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 MUC21A0A0G2JKD1 596 aa6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 MUC21A0A140T8X8 626 aa6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 CBY3A6NI87 242 aa6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 SRD5A1P18405 259 aa6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 INSL3P51460 131 aa6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 DEFB131AP59861 70 aa6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 NSUN5P1Q3KNT7 163 aa6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 ZNF876PQ49A33 203 aa6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 MUC21Q5SSG8 566 aa6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 MORN3Q6PF18 240 aaPredicted RBP6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 LINC00173Q6ZV60 143 aa6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 Q8N1Y9 231 aa6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 LINC00469Q8N7U9 141 aa6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 DLX4Q92988 240 aaPredicted RBP6.45□□□□□ -1.38
SNRNP40-202ENST00000373720 PTPN13Q12923 2485 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 OR11H12B2RN74 326 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 I3L3M4 83 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 EREGO14944 169 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 MGPP08493 103 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 TFPI2P48307 235 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 SLURP1P55000 103 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 HERVK_113P61574 105 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 HSD52Q0P140 79 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 BEAN1Q3B7T3 259 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 C10orf99Q6UWK7 81 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 C2orf66Q6UXQ4 117 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 ADAMTSL5Q6ZMM2 481 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 TMEM61Q8N0U2 210 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 ATOH7Q8N100 152 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 LINC01006Q8NI28 216 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 CSTL1Q9H114 145 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 MAP6D1Q9H9H5 199 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 HHLA3Q9XRX5 114 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 PYGO1Q9Y3Y4 419 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 CSPG4Q6UVK1 2322 aa6.44□□□□□ -1.38
SNRNP40-202ENST00000373720 hDV102S1A0JD36 115 aa6.43□□□□□ -1.38
SNRNP40-202ENST00000373720 SDHAF1A6NFY7 115 aa6.43□□□□□ -1.38
SNRNP40-202ENST00000373720 F5H697 171 aa6.43□□□□□ -1.38
SNRNP40-202ENST00000373720 M0QY20 66 aa6.43□□□□□ -1.38
SNRNP40-202ENST00000373720 CRYGDP07320 174 aa6.43□□□□□ -1.38
SNRNP40-202ENST00000373720 SPINK13Q1W4C9 94 aa6.43□□□□□ -1.38
SNRNP40-202ENST00000373720 KHDC1LQ5JSQ8 128 aa6.43□□□□□ -1.38
SNRNP40-202ENST00000373720 NDUFA11Q86Y39 141 aa6.43□□□□□ -1.38
SNRNP40-202ENST00000373720 STHQ8IWL8 128 aa6.43□□□□□ -1.38
SNRNP40-202ENST00000373720 NEXN-AS1Q8NBZ9 246 aa6.43□□□□□ -1.38
SNRNP40-202ENST00000373720 TRBV10-1A0A0K0K1A3 114 aa6.42□□□□□ -1.38
SNRNP40-202ENST00000373720 A0A1B0GV90 55 aa6.42□□□□□ -1.38
SNRNP40-202ENST00000373720 J3KRW8 73 aa6.42□□□□□ -1.38
SNRNP40-202ENST00000373720 KRTAP1-1Q07627 177 aa6.42□□□□□ -1.38
SNRNP40-202ENST00000373720 PMVKQ15126 192 aa6.42□□□□□ -1.38
SNRNP40-202ENST00000373720 SUMO4Q6EEV6 95 aa6.42□□□□□ -1.38
SNRNP40-202ENST00000373720 CHTOPQ9Y3Y2 248 aaKnown RBP6.42□□□□□ -1.38
SNRNP40-202ENST00000373720 TIMM8BQ9Y5J9 83 aaPredicted RBP6.42□□□□□ -1.38
SNRNP40-202ENST00000373720 UTP20O75691 2785 aaKnown RBP6.41□□□□□ -1.38
SNRNP40-202ENST00000373720 FASNP49327 2511 aaKnown RBP6.41□□□□□ -1.38
SNRNP40-202ENST00000373720 ASH1LQ9NR48 2969 aaKnown RBP6.41□□□□□ -1.38
SNRNP40-202ENST00000373720 H0Y8G0 127 aa6.41□□□□□ -1.38
SNRNP40-202ENST00000373720 ZNF56Q15929 161 aa6.41□□□□□ -1.38
SNRNP40-202ENST00000373720 MAJINQ3KP22 176 aa6.41□□□□□ -1.38
SNRNP40-202ENST00000373720 CD300EQ496F6 205 aaPredicted RBP6.41□□□□□ -1.38
SNRNP40-202ENST00000373720 BVES-AS1Q5T3Y7 98 aa6.41□□□□□ -1.38
SNRNP40-202ENST00000373720 DUX3Q96PT4 197 aa6.41□□□□□ -1.38
SNRNP40-202ENST00000373720 COX11Q9Y6N1 276 aa6.41□□□□□ -1.38
SNRNP40-202ENST00000373720 ZFYVE26Q68DK2 2539 aa6.41□□□□□ -1.38
SNRNP40-202ENST00000373720 TRAV26-2A0A0B4J265 109 aa6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 IGIPA6NJ69 53 aa6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 E9PLD3 99 aa6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 IGLV1-51P01701 117 aa6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 IGHV3-53P01767 116 aa6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 FGF6P10767 208 aa6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 GATA1P15976 413 aaPredicted RBP6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 PROK1P58294 105 aa6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 ZC2HC1BQ5TFG8 222 aa6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 OR11H2Q8NH07 326 aa6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 C18orf15Q96N68 181 aa6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 LINC01587Q99440 93 aa6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 MDFICQ9P1T7 246 aa6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 TNFRSF18Q9Y5U5 241 aa6.4□□□□□ -1.38
SNRNP40-202ENST00000373720 TRAV12-2A0A075B6T6 113 aa6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 H3BRM9 83 aa6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 RS1O15537 224 aa6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 HINT1P49773 126 aaPredicted RBP6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 DAZ2Q13117 558 aaKnown RBP6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 MPV17L2Q567V2 206 aa6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 STPG4Q8N801 248 aa6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 C20orf203Q8NBC4 194 aa6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 TMEM263Q8WUH6 116 aaKnown RBP6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 RPL39LQ96EH5 51 aaKnown RBP6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 TMEM208Q9BTX3 173 aa6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 TIMM21Q9BVV7 248 aa6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 ESM1Q9NQ30 184 aa6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 SPANXA1Q9NS26 97 aa6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 MRPL35Q9NZE8 188 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms